RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 SNCAP37840 140 aa18.67■□□□□ 0.58
HLA-C-204ENST00000415537 SPINK9Q5DT21 86 aa18.67■□□□□ 0.58
HLA-C-204ENST00000415537 OR13C8Q8NGS7 320 aa18.67■□□□□ 0.58
HLA-C-204ENST00000415537 MARCH1Q8TCQ1 289 aa18.67■□□□□ 0.58
HLA-C-204ENST00000415537 GGTLC1Q9BX51 225 aa18.67■□□□□ 0.58
HLA-C-204ENST00000415537 GNG7O60262 68 aa18.66■□□□□ 0.58
HLA-C-204ENST00000415537 FCGR2BP31994 310 aaPredicted RBP18.66■□□□□ 0.58
HLA-C-204ENST00000415537 MEF2DQ14814 521 aa18.66■□□□□ 0.58
HLA-C-204ENST00000415537 SP6Q3SY56 376 aa18.66■□□□□ 0.58
HLA-C-204ENST00000415537 RNASE11Q8TAA1 199 aaKnown RBP18.66■□□□□ 0.58
HLA-C-204ENST00000415537 RAB2BQ8WUD1 216 aa18.66■□□□□ 0.58
HLA-C-204ENST00000415537 RRNAD1Q96FB5 475 aaKnown RBP18.66■□□□□ 0.58
HLA-C-204ENST00000415537 B3GALNT1O75752 331 aa18.65■□□□□ 0.58
HLA-C-204ENST00000415537 CTSDP07339 412 aaPredicted RBP18.65■□□□□ 0.58
HLA-C-204ENST00000415537 IL18Q14116 193 aa18.65■□□□□ 0.58
HLA-C-204ENST00000415537 IL17DQ8TAD2 202 aa18.65■□□□□ 0.58
HLA-C-204ENST00000415537 DIRAS2Q96HU8 199 aa18.65■□□□□ 0.58
HLA-C-204ENST00000415537 C14orf166Q9Y224 244 aaKnown RBP18.65■□□□□ 0.58
HLA-C-204ENST00000415537 A0A0B4J293 547 aa18.64■□□□□ 0.57
HLA-C-204ENST00000415537 DISC1C4P0D8 188 aa18.64■□□□□ 0.57
HLA-C-204ENST00000415537 ST8SIA3O43173 380 aa18.64■□□□□ 0.57
HLA-C-204ENST00000415537 IGHV3-48P01763 117 aa18.64■□□□□ 0.57
HLA-C-204ENST00000415537 SUB1P53999 127 aaKnown RBP eCLIP18.64■□□□□ 0.57
HLA-C-204ENST00000415537 NXF2Q9GZY0 626 aaKnown RBP18.64■□□□□ 0.57
HLA-C-204ENST00000415537 ENY2Q9NPA8 101 aa18.64■□□□□ 0.57
HLA-C-204ENST00000415537 RABL2AQ9UBK7 228 aaPredicted RBP18.64■□□□□ 0.57
HLA-C-204ENST00000415537 UBQLN2Q9UHD9 624 aa18.64■□□□□ 0.57
HLA-C-204ENST00000415537 RABL2BQ9UNT1 228 aa18.64■□□□□ 0.57
HLA-C-204ENST00000415537 P0C879 139 aa18.63■□□□□ 0.57
HLA-C-204ENST00000415537 UCP1P25874 307 aa18.63■□□□□ 0.57
HLA-C-204ENST00000415537 TMBIM6P55061 237 aa18.63■□□□□ 0.57
HLA-C-204ENST00000415537 FAAP20Q6NZ36 180 aa18.63■□□□□ 0.57
HLA-C-204ENST00000415537 DUSP18Q8NEJ0 188 aa18.63■□□□□ 0.57
HLA-C-204ENST00000415537 SMIM4Q8WVI0 70 aa18.63■□□□□ 0.57
HLA-C-204ENST00000415537 CCDC59Q9P031 241 aaKnown RBP18.63■□□□□ 0.57
HLA-C-204ENST00000415537 SMPXQ9UHP9 88 aa18.63■□□□□ 0.57
HLA-C-204ENST00000415537 TEX13DA0A0J9YY54 714 aaPredicted RBP18.62■□□□□ 0.57
HLA-C-204ENST00000415537 OR4C46A6NHA9 309 aa18.62■□□□□ 0.57
HLA-C-204ENST00000415537 NPBWR1P48145 328 aa18.62■□□□□ 0.57
HLA-C-204ENST00000415537 HOXA1P49639 335 aaPredicted RBP18.62■□□□□ 0.57
HLA-C-204ENST00000415537 TMEM116Q8NCL8 245 aa18.62■□□□□ 0.57
HLA-C-204ENST00000415537 BCL7BQ9BQE9 202 aa18.62■□□□□ 0.57
HLA-C-204ENST00000415537 TRAV14DV4A0A0A6YYC5 116 aa18.61■□□□□ 0.57
HLA-C-204ENST00000415537 IGHV7-4-1A0A0J9YVY3 117 aa18.61■□□□□ 0.57
HLA-C-204ENST00000415537 INS-IGF2F8WCM5 200 aa18.61■□□□□ 0.57
HLA-C-204ENST00000415537 CTDSPLO15194 276 aa18.61■□□□□ 0.57
HLA-C-204ENST00000415537 NOL3O60936 208 aaKnown RBP18.61■□□□□ 0.57
HLA-C-204ENST00000415537 AKAIN1P0CW23 69 aa18.61■□□□□ 0.57
HLA-C-204ENST00000415537 ETV6P41212 452 aa18.61■□□□□ 0.57
HLA-C-204ENST00000415537 DYNC2LI1Q8TCX1 351 aa18.61■□□□□ 0.57
HLA-C-204ENST00000415537 OR10C1Q96KK4 312 aa18.61■□□□□ 0.57
HLA-C-204ENST00000415537 RHPN1-AS1Q9BWJ2 59 aa18.61■□□□□ 0.57
HLA-C-204ENST00000415537 C6orf62Q9GZU0 229 aaPredicted RBP18.61■□□□□ 0.57
HLA-C-204ENST00000415537 CORTO00230 105 aa18.6■□□□□ 0.57
HLA-C-204ENST00000415537 OR5AC1P0C628 307 aa18.6■□□□□ 0.57
HLA-C-204ENST00000415537 SURF2Q15527 256 aaPredicted RBP18.6■□□□□ 0.57
HLA-C-204ENST00000415537 RNF2Q99496 336 aa18.6■□□□□ 0.57
HLA-C-204ENST00000415537 GINS3Q9BRX5 216 aa18.6■□□□□ 0.57
HLA-C-204ENST00000415537 CHEK1O14757 476 aa18.59■□□□□ 0.57
HLA-C-204ENST00000415537 APOC4P55056 127 aa18.59■□□□□ 0.57
HLA-C-204ENST00000415537 FAM219AQ8IW50 185 aa18.59■□□□□ 0.57
HLA-C-204ENST00000415537 OR4C16Q8NGL9 310 aa18.59■□□□□ 0.57
HLA-C-204ENST00000415537 RTBDNQ9BSG5 229 aaPredicted RBP18.59■□□□□ 0.57
HLA-C-204ENST00000415537 TMEM222Q9H0R3 208 aa18.59■□□□□ 0.57
HLA-C-204ENST00000415537 NAA60Q9H7X0 242 aa18.59■□□□□ 0.57
HLA-C-204ENST00000415537 IGHV3-49A0A0A0MS15 119 aa18.58■□□□□ 0.56
HLA-C-204ENST00000415537 LCE6AA0A183 80 aa18.58■□□□□ 0.56
HLA-C-204ENST00000415537 CDS2O95674 445 aa18.58■□□□□ 0.56
HLA-C-204ENST00000415537 BMI1P35226 326 aa18.58■□□□□ 0.56
HLA-C-204ENST00000415537 DHODHQ02127 395 aa18.58■□□□□ 0.56
HLA-C-204ENST00000415537 PRRT1Q99946 306 aa18.58■□□□□ 0.56
HLA-C-204ENST00000415537 OVOL2Q9BRP0 275 aa18.58■□□□□ 0.56
HLA-C-204ENST00000415537 A0A0G2JRQ6 117 aa18.57■□□□□ 0.56
HLA-C-204ENST00000415537 RPL5P46777 297 aaKnown RBP18.57■□□□□ 0.56
HLA-C-204ENST00000415537 ODF3L2Q3SX64 289 aa18.57■□□□□ 0.56
HLA-C-204ENST00000415537 GLYATL2Q8WU03 294 aa18.57■□□□□ 0.56
HLA-C-204ENST00000415537 RBPMSQ93062 196 aaKnown RBP18.57■□□□□ 0.56
HLA-C-204ENST00000415537 ZNF414Q96IQ9 312 aa18.57■□□□□ 0.56
HLA-C-204ENST00000415537 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.57■□□□□ 0.56
HLA-C-204ENST00000415537 GPR132Q9UNW8 380 aa18.57■□□□□ 0.56
HLA-C-204ENST00000415537 CSMD3Q7Z407 3707 aa18.57■□□□□ 0.56
HLA-C-204ENST00000415537 RNASE2P10153 161 aaKnown RBP18.56■□□□□ 0.56
HLA-C-204ENST00000415537 OPRK1P41145 380 aa18.56■□□□□ 0.56
HLA-C-204ENST00000415537 SPCS3P61009 180 aa18.56■□□□□ 0.56
HLA-C-204ENST00000415537 ZNF600Q6ZNG1 722 aa18.56■□□□□ 0.56
HLA-C-204ENST00000415537 RSL24D1Q9UHA3 163 aaKnown RBP18.56■□□□□ 0.56
HLA-C-204ENST00000415537 TENM2Q9NT68 2774 aa18.55■□□□□ 0.56
HLA-C-204ENST00000415537 IGKV3-7A0A075B6H7 116 aa18.55■□□□□ 0.56
HLA-C-204ENST00000415537 IGHV3OR16-13A0A075B7E8 117 aa18.55■□□□□ 0.56
HLA-C-204ENST00000415537 IGHV3-74A0A0B4J1X5 117 aa18.55■□□□□ 0.56
HLA-C-204ENST00000415537 SCGB2A1O75556 95 aa18.55■□□□□ 0.56
HLA-C-204ENST00000415537 TMEM50AO95807 157 aa18.55■□□□□ 0.56
HLA-C-204ENST00000415537 CMC4P56277 68 aaPredicted RBP18.55■□□□□ 0.56
HLA-C-204ENST00000415537 TOMM20LQ6UXN7 152 aa18.55■□□□□ 0.56
HLA-C-204ENST00000415537 Q6ZRM9 215 aa18.55■□□□□ 0.56
HLA-C-204ENST00000415537 OR51S1Q8NGJ8 323 aa18.55■□□□□ 0.56
HLA-C-204ENST00000415537 SCP2D1Q9UJQ7 156 aa18.55■□□□□ 0.56
HLA-C-204ENST00000415537 PUS1Q9Y606 427 aaKnown RBP eCLIP18.55■□□□□ 0.56
HLA-C-204ENST00000415537 ANKRD20A5PA0PJZ0 165 aa18.54■□□□□ 0.56
HLA-C-204ENST00000415537 CRYM-AS1A6NIL9 109 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms