RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 AMMECR1Q9Y4X0 333 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-202ENST00000414700 CUBNO60494 3623 aa12.5□□□□□ -0.41
SHMT2-202ENST00000414700 IGHV1-3A0A0C4DH29 117 aa12.5□□□□□ -0.41
SHMT2-202ENST00000414700 A0A0G2JRQ6 117 aa12.5□□□□□ -0.41
SHMT2-202ENST00000414700 A0A1W2PPI3 338 aa12.5□□□□□ -0.41
SHMT2-202ENST00000414700 H0YJW9 148 aa12.5□□□□□ -0.41
SHMT2-202ENST00000414700 HBE1P02100 147 aa12.5□□□□□ -0.41
SHMT2-202ENST00000414700 THBS3P49746 956 aa12.5□□□□□ -0.41
SHMT2-202ENST00000414700 LGALS4P56470 323 aa12.5□□□□□ -0.41
SHMT2-202ENST00000414700 FAM71F2Q6NXP2 309 aa12.5□□□□□ -0.41
SHMT2-202ENST00000414700 ZNF695Q8IW36 515 aa12.5□□□□□ -0.41
SHMT2-202ENST00000414700 SNHG12Q9BXW3 62 aa12.5□□□□□ -0.41
SHMT2-202ENST00000414700 HIPK2Q9H2X6 1198 aa12.5□□□□□ -0.41
SHMT2-202ENST00000414700 ANK3Q12955 4377 aaKnown RBP12.5□□□□□ -0.41
SHMT2-202ENST00000414700 PLXNB1O43157 2135 aa12.5□□□□□ -0.41
SHMT2-202ENST00000414700 NPFFO15130 113 aa12.49□□□□□ -0.41
SHMT2-202ENST00000414700 OPN1MWP04001 364 aa12.49□□□□□ -0.41
SHMT2-202ENST00000414700 OPN1MW2P0DN77 364 aa12.49□□□□□ -0.41
SHMT2-202ENST00000414700 OPN1MW3P0DN78 364 aa12.49□□□□□ -0.41
SHMT2-202ENST00000414700 RPL23AP62750 156 aaKnown RBP12.49□□□□□ -0.41
SHMT2-202ENST00000414700 KRTAP1-1Q07627 177 aa12.49□□□□□ -0.41
SHMT2-202ENST00000414700 COA6Q5JTJ3 125 aaKnown RBP12.49□□□□□ -0.41
SHMT2-202ENST00000414700 VKORC1L1Q8N0U8 176 aa12.49□□□□□ -0.41
SHMT2-202ENST00000414700 LGI3Q8N145 548 aa12.49□□□□□ -0.41
SHMT2-202ENST00000414700 OR5AN1Q8NGI8 311 aa12.49□□□□□ -0.41
SHMT2-202ENST00000414700 MTORP42345 2549 aa12.49□□□□□ -0.41
SHMT2-202ENST00000414700 IGHV1-69DA0A0B4J2H0 117 aa12.49□□□□□ -0.41
SHMT2-202ENST00000414700 A0A1B0GU03 582 aa12.49□□□□□ -0.41
SHMT2-202ENST00000414700 LOC102723971A0A1B0GUV8 181 aa12.49□□□□□ -0.41
SHMT2-202ENST00000414700 ZNF705GA8MUZ8 300 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-202ENST00000414700 M0R143 59 aa12.49□□□□□ -0.41
SHMT2-202ENST00000414700 IGKV1-5P01602 117 aa12.49□□□□□ -0.41
SHMT2-202ENST00000414700 IGHV1-69P01742 117 aa12.49□□□□□ -0.41
SHMT2-202ENST00000414700 FBLN7Q53RD9 439 aa12.49□□□□□ -0.41
SHMT2-202ENST00000414700 DPPA3Q6W0C5 159 aa12.49□□□□□ -0.41
SHMT2-202ENST00000414700 MOB3BQ86TA1 216 aa12.49□□□□□ -0.41
SHMT2-202ENST00000414700 OR4X1Q8NH49 305 aa12.49□□□□□ -0.41
SHMT2-202ENST00000414700 SLC35D1Q9NTN3 355 aa12.49□□□□□ -0.41
SHMT2-202ENST00000414700 NAV3Q8IVL0 2385 aa12.48□□□□□ -0.41
SHMT2-202ENST00000414700 TIMM23O14925 209 aa12.48□□□□□ -0.41
SHMT2-202ENST00000414700 KRASP01116 189 aa12.48□□□□□ -0.41
SHMT2-202ENST00000414700 CD24P25063 80 aa12.48□□□□□ -0.41
SHMT2-202ENST00000414700 G6PCP35575 357 aa12.48□□□□□ -0.41
SHMT2-202ENST00000414700 OR2C3Q8N628 320 aa12.48□□□□□ -0.41
SHMT2-202ENST00000414700 GNPNAT1Q96EK6 184 aaPredicted RBP12.48□□□□□ -0.41
SHMT2-202ENST00000414700 ADTRPQ96IZ2 230 aa12.48□□□□□ -0.41
SHMT2-202ENST00000414700 RITA1Q96K30 269 aa12.48□□□□□ -0.41
SHMT2-202ENST00000414700 CTDSP1Q9GZU7 261 aa12.48□□□□□ -0.41
SHMT2-202ENST00000414700 C11orf1Q9H5F2 150 aa12.48□□□□□ -0.41
SHMT2-202ENST00000414700 RFNGQ9Y644 331 aa12.48□□□□□ -0.41
SHMT2-202ENST00000414700 EPHA1P21709 976 aa12.47□□□□□ -0.41
SHMT2-202ENST00000414700 ARL6IP6Q8N6S5 226 aa12.47□□□□□ -0.41
SHMT2-202ENST00000414700 OR4D5Q8NGN0 318 aa12.47□□□□□ -0.41
SHMT2-202ENST00000414700 SRD5A3Q9H8P0 318 aa12.47□□□□□ -0.41
SHMT2-202ENST00000414700 SRRM4A7MD48 611 aaKnown RBP12.47□□□□□ -0.41
SHMT2-202ENST00000414700 CYSRT1A8MQ03 144 aa12.47□□□□□ -0.41
SHMT2-202ENST00000414700 J3QLI3 93 aa12.47□□□□□ -0.41
SHMT2-202ENST00000414700 METTL15P1P0C7V9 234 aa12.47□□□□□ -0.41
SHMT2-202ENST00000414700 ZNF25P17030 456 aaPredicted RBP12.47□□□□□ -0.41
SHMT2-202ENST00000414700 CEACAM3P40198 252 aa12.47□□□□□ -0.41
SHMT2-202ENST00000414700 SRPXP78539 464 aa12.47□□□□□ -0.41
SHMT2-202ENST00000414700 C21orf62-AS1Q17RA5 79 aa12.47□□□□□ -0.41
SHMT2-202ENST00000414700 MINOS1Q5TGZ0 78 aa12.47□□□□□ -0.41
SHMT2-202ENST00000414700 FAM90A2PQ658T7 463 aa12.47□□□□□ -0.41
SHMT2-202ENST00000414700 OR4S2Q8NH73 311 aa12.47□□□□□ -0.41
SHMT2-202ENST00000414700 VAX2Q9UIW0 290 aa12.47□□□□□ -0.41
SHMT2-202ENST00000414700 MINOS1-NBL1R4GNA1 71 aa12.47□□□□□ -0.41
SHMT2-202ENST00000414700 IGSF23A1L1A6 192 aa12.46□□□□□ -0.41
SHMT2-202ENST00000414700 FAM24AA6NFZ4 105 aa12.46□□□□□ -0.41
SHMT2-202ENST00000414700 RBFOX2O43251 390 aaKnown RBP eCLIP12.46□□□□□ -0.415e-15■■■■■ 33.3
SHMT2-202ENST00000414700 HPRT1P00492 218 aa12.46□□□□□ -0.41
SHMT2-202ENST00000414700 NMSQ5H8A3 153 aa12.46□□□□□ -0.41
SHMT2-202ENST00000414700 Q6ZRM9 215 aa12.46□□□□□ -0.41
SHMT2-202ENST00000414700 TCTEX1D1Q8N7M0 179 aa12.46□□□□□ -0.41
SHMT2-202ENST00000414700 CFHR4Q92496 578 aa12.46□□□□□ -0.41
SHMT2-202ENST00000414700 SMR3AQ99954 134 aa12.46□□□□□ -0.41
SHMT2-202ENST00000414700 TBL2Q9Y4P3 447 aaKnown RBP12.46□□□□□ -0.41
SHMT2-202ENST00000414700 TET2Q6N021 2002 aaPredicted RBP12.46□□□□□ -0.42
SHMT2-202ENST00000414700 A0A0U1RQK1 487 aa12.45□□□□□ -0.42
SHMT2-202ENST00000414700 APOA2P02652 100 aa12.45□□□□□ -0.42
SHMT2-202ENST00000414700 VDAC1P21796 283 aa12.45□□□□□ -0.42
SHMT2-202ENST00000414700 GAGE1Q13065 139 aa12.45□□□□□ -0.42
SHMT2-202ENST00000414700 RTL8BQ17RB0 113 aa12.45□□□□□ -0.42
SHMT2-202ENST00000414700 C22orf15Q8WYQ4 148 aa12.45□□□□□ -0.42
SHMT2-202ENST00000414700 IL22RA2Q969J5 263 aa12.45□□□□□ -0.42
SHMT2-202ENST00000414700 WASHC3Q9Y3C0 194 aa12.45□□□□□ -0.42
SHMT2-202ENST00000414700 TRAV1-1A0A0B4J248 108 aa12.45□□□□□ -0.42
SHMT2-202ENST00000414700 XKRY2A2RUG3 117 aa12.45□□□□□ -0.42
SHMT2-202ENST00000414700 DLEU1O43261 78 aa12.45□□□□□ -0.42
SHMT2-202ENST00000414700 KIR2DS2P43631 304 aa12.45□□□□□ -0.42
SHMT2-202ENST00000414700 IQCJQ1A5X6 159 aa12.45□□□□□ -0.42
SHMT2-202ENST00000414700 ANKRD39Q53RE8 183 aa12.45□□□□□ -0.42
SHMT2-202ENST00000414700 MRPL52Q86TS9 123 aaKnown RBP12.45□□□□□ -0.42
SHMT2-202ENST00000414700 GPR146Q96CH1 333 aa12.45□□□□□ -0.42
SHMT2-202ENST00000414700 ACY3Q96HD9 319 aa12.45□□□□□ -0.42
SHMT2-202ENST00000414700 GOLT1BQ9Y3E0 138 aa12.45□□□□□ -0.42
SHMT2-202ENST00000414700 CNTFRP26992 372 aa12.44□□□□□ -0.42
SHMT2-202ENST00000414700 ERVFC1-1P60608 527 aa12.44□□□□□ -0.42
SHMT2-202ENST00000414700 RAB11AP62491 216 aa12.44□□□□□ -0.42
SHMT2-202ENST00000414700 PDPNQ86YL7 162 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms