RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 RND3P61587 244 aa11.52□□□□□ -0.57
ACTB-202ENST00000414620 ZNF124Q15973 351 aa11.52□□□□□ -0.57
ACTB-202ENST00000414620 APRG1Q8IVJ8 170 aa11.52□□□□□ -0.57
ACTB-202ENST00000414620 SLC35G3Q8N808 338 aa11.52□□□□□ -0.57
ACTB-202ENST00000414620 TMEM116Q8NCL8 245 aa11.52□□□□□ -0.57
ACTB-202ENST00000414620 RHPN1-AS1Q9BWJ2 59 aa11.52□□□□□ -0.57
ACTB-202ENST00000414620 ST8SIA3O43173 380 aa11.51□□□□□ -0.57
ACTB-202ENST00000414620 SPRY2O43597 315 aa11.51□□□□□ -0.57
ACTB-202ENST00000414620 EWSR1Q01844 656 aaKnown RBP eCLIP11.51□□□□□ -0.576e-17■■■□□ 16.2
ACTB-202ENST00000414620 TRIM16LQ309B1 348 aa11.51□□□□□ -0.57
ACTB-202ENST00000414620 SP6Q3SY56 376 aa11.51□□□□□ -0.57
ACTB-202ENST00000414620 SCGB2B2Q4G0G5 96 aa11.51□□□□□ -0.57
ACTB-202ENST00000414620 LYG2Q86SG7 212 aa11.51□□□□□ -0.57
ACTB-202ENST00000414620 GBGT1Q8N5D6 347 aa11.51□□□□□ -0.57
ACTB-202ENST00000414620 ZNF486Q96H40 463 aaPredicted RBP11.51□□□□□ -0.57
ACTB-202ENST00000414620 ABHD1Q96SE0 405 aa11.51□□□□□ -0.57
ACTB-202ENST00000414620 NXF2Q9GZY0 626 aaKnown RBP11.51□□□□□ -0.57
ACTB-202ENST00000414620 MTFP1Q9UDX5 166 aa11.51□□□□□ -0.57
ACTB-202ENST00000414620 C3orf85A0A1B0GTC6 90 aa11.5□□□□□ -0.57
ACTB-202ENST00000414620 CXorf65A6NEN9 183 aa11.5□□□□□ -0.57
ACTB-202ENST00000414620 IFNA17P01571 189 aa11.5□□□□□ -0.57
ACTB-202ENST00000414620 FCGR2BP31994 310 aaPredicted RBP11.5□□□□□ -0.57
ACTB-202ENST00000414620 FAAP20Q6NZ36 180 aa11.5□□□□□ -0.57
ACTB-202ENST00000414620 ARRDC1Q8N5I2 433 aa11.5□□□□□ -0.57
ACTB-202ENST00000414620 OR13C8Q8NGS7 320 aa11.5□□□□□ -0.57
ACTB-202ENST00000414620 RNASE11Q8TAA1 199 aaKnown RBP11.5□□□□□ -0.57
ACTB-202ENST00000414620 OR10C1Q96KK4 312 aa11.5□□□□□ -0.57
ACTB-202ENST00000414620 TXN2Q99757 166 aa11.5□□□□□ -0.57
ACTB-202ENST00000414620 PDCD10Q9BUL8 212 aa11.5□□□□□ -0.57
ACTB-202ENST00000414620 COPZ2Q9P299 210 aa11.5□□□□□ -0.57
ACTB-202ENST00000414620 DNAH1Q9P2D7 4330 aa11.5□□□□□ -0.57
ACTB-202ENST00000414620 TRAV14DV4A0A0A6YYC5 116 aa11.49□□□□□ -0.57
ACTB-202ENST00000414620 A0A0B4J293 547 aa11.49□□□□□ -0.57
ACTB-202ENST00000414620 IGHV3-66A0A0C4DH42 116 aa11.49□□□□□ -0.57
ACTB-202ENST00000414620 A0A0G2JRQ6 117 aa11.49□□□□□ -0.57
ACTB-202ENST00000414620 RGS5O15539 181 aa11.49□□□□□ -0.57
ACTB-202ENST00000414620 P0C879 139 aa11.49□□□□□ -0.57
ACTB-202ENST00000414620 BMI1P35226 326 aa11.49□□□□□ -0.57
ACTB-202ENST00000414620 HOXA1P49639 335 aaPredicted RBP11.49□□□□□ -0.57
ACTB-202ENST00000414620 TOMM20LQ6UXN7 152 aa11.49□□□□□ -0.57
ACTB-202ENST00000414620 Q6ZWC4 215 aa11.49□□□□□ -0.57
ACTB-202ENST00000414620 WFDC3Q8IUB2 231 aa11.49□□□□□ -0.57
ACTB-202ENST00000414620 STPG3Q8N7X2 389 aa11.49□□□□□ -0.57
ACTB-202ENST00000414620 CCDC71LQ8N9Z2 235 aa11.49□□□□□ -0.57
ACTB-202ENST00000414620 TMEM229BQ8NBD8 167 aa11.49□□□□□ -0.57
ACTB-202ENST00000414620 MARCH1Q8TCQ1 289 aa11.49□□□□□ -0.57
ACTB-202ENST00000414620 ST8SIA2Q92186 375 aa11.49□□□□□ -0.57
ACTB-202ENST00000414620 GALNT14Q96FL9 552 aa11.49□□□□□ -0.57
ACTB-202ENST00000414620 MIXL1Q9H2W2 232 aa11.49□□□□□ -0.57
ACTB-202ENST00000414620 TP53TG1Q9Y2A0 90 aa11.49□□□□□ -0.57
ACTB-202ENST00000414620 RAB3DO95716 219 aa11.48□□□□□ -0.57
ACTB-202ENST00000414620 APOHP02749 345 aaPredicted RBP11.48□□□□□ -0.57
ACTB-202ENST00000414620 TBPP20226 339 aa11.48□□□□□ -0.57
ACTB-202ENST00000414620 SNCAP37840 140 aa11.48□□□□□ -0.57
ACTB-202ENST00000414620 ETV6P41212 452 aa11.48□□□□□ -0.57
ACTB-202ENST00000414620 TAS2R19P59542 299 aa11.48□□□□□ -0.57
ACTB-202ENST00000414620 TCF24Q7RTU0 167 aa11.48□□□□□ -0.57
ACTB-202ENST00000414620 DUSP18Q8NEJ0 188 aa11.48□□□□□ -0.57
ACTB-202ENST00000414620 MAP6D1Q9H9H5 199 aa11.48□□□□□ -0.57
ACTB-202ENST00000414620 PUS1Q9Y606 427 aaKnown RBP eCLIP11.48□□□□□ -0.573e-13■□□□□ 8.3
ACTB-202ENST00000414620 ALMS1Q8TCU4 4167 aa11.48□□□□□ -0.57
ACTB-202ENST00000414620 KIR2DL5BA0A0G2JN68 375 aa11.47□□□□□ -0.57
ACTB-202ENST00000414620 KIR2DL5BA0A0G2JPC4 375 aa11.47□□□□□ -0.57
ACTB-202ENST00000414620 UBE2CO00762 179 aa11.47□□□□□ -0.57
ACTB-202ENST00000414620 CD74P04233 296 aa11.47□□□□□ -0.57
ACTB-202ENST00000414620 RNASE2P10153 161 aaKnown RBP11.47□□□□□ -0.57
ACTB-202ENST00000414620 FAM90A2PQ658T7 463 aa11.47□□□□□ -0.57
ACTB-202ENST00000414620 STEAP1BQ6NZ63 245 aa11.47□□□□□ -0.57
ACTB-202ENST00000414620 KIR2DL5AQ8N109 375 aa11.47□□□□□ -0.57
ACTB-202ENST00000414620 KIR2DL5BQ8NHK3 375 aa11.47□□□□□ -0.57
ACTB-202ENST00000414620 TERB2Q8NHR7 220 aa11.47□□□□□ -0.57
ACTB-202ENST00000414620 ZFAND1Q8TCF1 268 aa11.47□□□□□ -0.57
ACTB-202ENST00000414620 RNF183Q96D59 192 aa11.47□□□□□ -0.57
ACTB-202ENST00000414620 GINS3Q9BRX5 216 aa11.47□□□□□ -0.57
ACTB-202ENST00000414620 ZFAND3Q9H8U3 227 aa11.47□□□□□ -0.57
ACTB-202ENST00000414620 ENY2Q9NPA8 101 aa11.47□□□□□ -0.57
ACTB-202ENST00000414620 MRPL36Q9P0J6 103 aaKnown RBP11.47□□□□□ -0.57
ACTB-202ENST00000414620 EPPK1P58107 5090 aaKnown RBP11.47□□□□□ -0.57
ACTB-202ENST00000414620 CTDSP2O14595 271 aa11.46□□□□□ -0.57
ACTB-202ENST00000414620 ATG12O94817 140 aa11.46□□□□□ -0.57
ACTB-202ENST00000414620 OR5AC1P0C628 307 aa11.46□□□□□ -0.57
ACTB-202ENST00000414620 UCP1P25874 307 aa11.46□□□□□ -0.57
ACTB-202ENST00000414620 OPRK1P41145 380 aa11.46□□□□□ -0.57
ACTB-202ENST00000414620 NPBWR1P48145 328 aa11.46□□□□□ -0.57
ACTB-202ENST00000414620 TNFRSF9Q07011 255 aa11.46□□□□□ -0.57
ACTB-202ENST00000414620 SPCS2Q15005 226 aa11.46□□□□□ -0.57
ACTB-202ENST00000414620 ZNF600Q6ZNG1 722 aa11.46□□□□□ -0.57
ACTB-202ENST00000414620 GPR141Q7Z602 305 aa11.46□□□□□ -0.57
ACTB-202ENST00000414620 LILRB2Q8N423 598 aa11.46□□□□□ -0.57
ACTB-202ENST00000414620 RRNAD1Q96FB5 475 aaKnown RBP11.46□□□□□ -0.57
ACTB-202ENST00000414620 MRPS26Q9BYN8 205 aaKnown RBP11.46□□□□□ -0.57
ACTB-202ENST00000414620 C6orf62Q9GZU0 229 aaPredicted RBP11.46□□□□□ -0.57
ACTB-202ENST00000414620 AGRNO00468 2067 aa11.45□□□□□ -0.58
ACTB-202ENST00000414620 PLECQ15149 4684 aaKnown RBP11.45□□□□□ -0.58
ACTB-202ENST00000414620 A0A1B0GU03 582 aa11.45□□□□□ -0.58
ACTB-202ENST00000414620 GABARAPH6UMI1 98 aa11.45□□□□□ -0.58
ACTB-202ENST00000414620 TMEM50AO95807 157 aa11.45□□□□□ -0.58
ACTB-202ENST00000414620 SUB1P53999 127 aaKnown RBP eCLIP11.45□□□□□ -0.584e-15■□□□□ 8.7
ACTB-202ENST00000414620 RPL11P62913 178 aaKnown RBP11.45□□□□□ -0.58
ACTB-202ENST00000414620 MLANAQ16655 118 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms