RNA–Protein interactions for RNA: ENST00000413758.1

COL6A2-205, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-205ENST00000413758 HOXA1P49639 335 aaPredicted RBP12.54□□□□□ -0.4
COL6A2-205ENST00000413758 STEAP1BQ6NZ63 245 aa12.54□□□□□ -0.4
COL6A2-205ENST00000413758 ZNF114Q8NC26 417 aa12.54□□□□□ -0.4
COL6A2-205ENST00000413758 OR4D10Q8NGI6 311 aa12.54□□□□□ -0.4
COL6A2-205ENST00000413758 OR13C8Q8NGS7 320 aa12.54□□□□□ -0.4
COL6A2-205ENST00000413758 TERB2Q8NHR7 220 aa12.54□□□□□ -0.4
COL6A2-205ENST00000413758 MARCH1Q8TCQ1 289 aa12.54□□□□□ -0.4
COL6A2-205ENST00000413758 RRNAD1Q96FB5 475 aaKnown RBP12.54□□□□□ -0.4
COL6A2-205ENST00000413758 TXN2Q99757 166 aa12.54□□□□□ -0.4
COL6A2-205ENST00000413758 GABARAPH6UMI1 98 aa12.53□□□□□ -0.4
COL6A2-205ENST00000413758 APOC4P55056 127 aa12.53□□□□□ -0.4
COL6A2-205ENST00000413758 SPCS2Q15005 226 aa12.53□□□□□ -0.4
COL6A2-205ENST00000413758 CLVS1Q8IUQ0 354 aaPredicted RBP12.53□□□□□ -0.4
COL6A2-205ENST00000413758 TMEM116Q8NCL8 245 aa12.53□□□□□ -0.4
COL6A2-205ENST00000413758 MIXL1Q9H2W2 232 aa12.53□□□□□ -0.4
COL6A2-205ENST00000413758 SMPXQ9UHP9 88 aa12.53□□□□□ -0.4
COL6A2-205ENST00000413758 C14orf166Q9Y224 244 aaKnown RBP12.53□□□□□ -0.4
COL6A2-205ENST00000413758 IGKV3-7A0A075B6H7 116 aa12.52□□□□□ -0.41
COL6A2-205ENST00000413758 IGHV7-4-1A0A0J9YVY3 117 aa12.52□□□□□ -0.41
COL6A2-205ENST00000413758 DISC1C4P0D8 188 aa12.52□□□□□ -0.41
COL6A2-205ENST00000413758 CTDSP2O14595 271 aa12.52□□□□□ -0.41
COL6A2-205ENST00000413758 ST8SIA3O43173 380 aa12.52□□□□□ -0.41
COL6A2-205ENST00000413758 ETV6P41212 452 aa12.52□□□□□ -0.41
COL6A2-205ENST00000413758 NPBWR1P48145 328 aa12.52□□□□□ -0.41
COL6A2-205ENST00000413758 TFPI2P48307 235 aa12.52□□□□□ -0.41
COL6A2-205ENST00000413758 SUB1P53999 127 aaKnown RBP eCLIP12.52□□□□□ -0.41
COL6A2-205ENST00000413758 FAAP20Q6NZ36 180 aa12.52□□□□□ -0.41
COL6A2-205ENST00000413758 DUSP18Q8NEJ0 188 aa12.52□□□□□ -0.41
COL6A2-205ENST00000413758 RHPN1-AS1Q9BWJ2 59 aa12.52□□□□□ -0.41
COL6A2-205ENST00000413758 TENM2Q9NT68 2774 aa12.52□□□□□ -0.41
COL6A2-205ENST00000413758 IGHV3OR16-13A0A075B7E8 117 aa12.51□□□□□ -0.41
COL6A2-205ENST00000413758 TRAV14DV4A0A0A6YYC5 116 aa12.51□□□□□ -0.41
COL6A2-205ENST00000413758 IGHV3-74A0A0B4J1X5 117 aa12.51□□□□□ -0.41
COL6A2-205ENST00000413758 A0A0B4J293 547 aa12.51□□□□□ -0.41
COL6A2-205ENST00000413758 TEX13DA0A0J9YY54 714 aaPredicted RBP12.51□□□□□ -0.41
COL6A2-205ENST00000413758 CD74P04233 296 aa12.51□□□□□ -0.41
COL6A2-205ENST00000413758 RPL35AP18077 110 aaKnown RBP12.51□□□□□ -0.41
COL6A2-205ENST00000413758 ALDH3B2P48448 385 aa12.51□□□□□ -0.41
COL6A2-205ENST00000413758 MRPS10P82664 201 aaKnown RBP12.51□□□□□ -0.41
COL6A2-205ENST00000413758 IL18Q14116 193 aa12.51□□□□□ -0.41
COL6A2-205ENST00000413758 MEF2DQ14814 521 aa12.51□□□□□ -0.41
COL6A2-205ENST00000413758 DIRAS2Q96HU8 199 aa12.51□□□□□ -0.41
COL6A2-205ENST00000413758 RNF2Q99496 336 aa12.51□□□□□ -0.41
COL6A2-205ENST00000413758 OVOL2Q9BRP0 275 aa12.51□□□□□ -0.41
COL6A2-205ENST00000413758 GINS3Q9BRX5 216 aa12.51□□□□□ -0.41
COL6A2-205ENST00000413758 NXF2Q9GZY0 626 aaKnown RBP12.51□□□□□ -0.41
COL6A2-205ENST00000413758 CHEK1O14757 476 aa12.5□□□□□ -0.41
COL6A2-205ENST00000413758 NOL3O60936 208 aaKnown RBP12.5□□□□□ -0.41
COL6A2-205ENST00000413758 JTBO76095 146 aa12.5□□□□□ -0.41
COL6A2-205ENST00000413758 FCGR2BP31994 310 aaPredicted RBP12.5□□□□□ -0.41
COL6A2-205ENST00000413758 BMI1P35226 326 aa12.5□□□□□ -0.41
COL6A2-205ENST00000413758 SSBP1Q04837 148 aaKnown RBP12.5□□□□□ -0.41
COL6A2-205ENST00000413758 ODF3L2Q3SX64 289 aa12.5□□□□□ -0.41
COL6A2-205ENST00000413758 STPG3Q8N7X2 389 aa12.5□□□□□ -0.41
COL6A2-205ENST00000413758 C6orf62Q9GZU0 229 aaPredicted RBP12.5□□□□□ -0.41
COL6A2-205ENST00000413758 SPRY2O43597 315 aa12.49□□□□□ -0.41
COL6A2-205ENST00000413758 B3GALNT1O75752 331 aa12.49□□□□□ -0.41
COL6A2-205ENST00000413758 UCP1P25874 307 aa12.49□□□□□ -0.41
COL6A2-205ENST00000413758 DEFB135Q30KP9 77 aa12.49□□□□□ -0.41
COL6A2-205ENST00000413758 GBGT1Q8N5D6 347 aa12.49□□□□□ -0.41
COL6A2-205ENST00000413758 CORTO00230 105 aa12.48□□□□□ -0.41
COL6A2-205ENST00000413758 OR5AC1P0C628 307 aa12.48□□□□□ -0.41
COL6A2-205ENST00000413758 P0C879 139 aa12.48□□□□□ -0.41
COL6A2-205ENST00000413758 AKAIN1P0CW23 69 aa12.48□□□□□ -0.41
COL6A2-205ENST00000413758 CMC4P56277 68 aaPredicted RBP12.48□□□□□ -0.41
COL6A2-205ENST00000413758 RPL11P62913 178 aaKnown RBP12.48□□□□□ -0.41
COL6A2-205ENST00000413758 PAFAH1B2P68402 229 aa12.48□□□□□ -0.41
COL6A2-205ENST00000413758 TOMM20LQ6UXN7 152 aa12.48□□□□□ -0.41
COL6A2-205ENST00000413758 WFDC3Q8IUB2 231 aa12.48□□□□□ -0.41
COL6A2-205ENST00000413758 APRG1Q8IVJ8 170 aa12.48□□□□□ -0.41
COL6A2-205ENST00000413758 RAB2BQ8WUD1 216 aa12.48□□□□□ -0.41
COL6A2-205ENST00000413758 SMIM4Q8WVI0 70 aa12.48□□□□□ -0.41
COL6A2-205ENST00000413758 GALNT14Q96FL9 552 aa12.48□□□□□ -0.41
COL6A2-205ENST00000413758 OR10C1Q96KK4 312 aa12.48□□□□□ -0.41
COL6A2-205ENST00000413758 TMEM222Q9H0R3 208 aa12.48□□□□□ -0.41
COL6A2-205ENST00000413758 DYNC2H1Q8NCM8 4307 aaKnown RBP12.47□□□□□ -0.41
COL6A2-205ENST00000413758 IGHV3-66A0A0C4DH42 116 aa12.47□□□□□ -0.41
COL6A2-205ENST00000413758 A0A0G2JRQ6 117 aa12.47□□□□□ -0.41
COL6A2-205ENST00000413758 UBE2CO00762 179 aa12.47□□□□□ -0.41
COL6A2-205ENST00000413758 SCGB2A1O75556 95 aa12.47□□□□□ -0.41
COL6A2-205ENST00000413758 RNASE2P10153 161 aaKnown RBP12.47□□□□□ -0.41
COL6A2-205ENST00000413758 OPRK1P41145 380 aa12.47□□□□□ -0.41
COL6A2-205ENST00000413758 DHODHQ02127 395 aa12.47□□□□□ -0.41
COL6A2-205ENST00000413758 ZNF600Q6ZNG1 722 aa12.47□□□□□ -0.41
COL6A2-205ENST00000413758 Q6ZWC4 215 aa12.47□□□□□ -0.41
COL6A2-205ENST00000413758 TCF24Q7RTU0 167 aa12.47□□□□□ -0.41
COL6A2-205ENST00000413758 OR4C16Q8NGL9 310 aa12.47□□□□□ -0.41
COL6A2-205ENST00000413758 RTBDNQ9BSG5 229 aaPredicted RBP12.47□□□□□ -0.41
COL6A2-205ENST00000413758 NAA60Q9H7X0 242 aa12.47□□□□□ -0.41
COL6A2-205ENST00000413758 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.47□□□□□ -0.41
COL6A2-205ENST00000413758 CCDC59Q9P031 241 aaKnown RBP12.47□□□□□ -0.41
COL6A2-205ENST00000413758 RABL2AQ9UBK7 228 aaPredicted RBP12.47□□□□□ -0.41
COL6A2-205ENST00000413758 RABL2BQ9UNT1 228 aa12.47□□□□□ -0.41
COL6A2-205ENST00000413758 PUS1Q9Y606 427 aaKnown RBP eCLIP12.47□□□□□ -0.41
COL6A2-205ENST00000413758 CXorf65A6NEN9 183 aa12.46□□□□□ -0.41
COL6A2-205ENST00000413758 INS-IGF2F8WCM5 200 aa12.46□□□□□ -0.41
COL6A2-205ENST00000413758 DNASE2O00115 360 aaPredicted RBP12.46□□□□□ -0.41
COL6A2-205ENST00000413758 TMEM50AO95807 157 aa12.46□□□□□ -0.41
COL6A2-205ENST00000413758 TMBIM6P55061 237 aa12.46□□□□□ -0.41
COL6A2-205ENST00000413758 SPCS3P61009 180 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 155 ms