RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 PRR20AP86496 221 aa7.11□□□□□ -1.27
RFFL-203ENST00000413582 PPP1R1AQ13522 171 aa7.11□□□□□ -1.27
RFFL-203ENST00000413582 DEFB135Q30KP9 77 aa7.11□□□□□ -1.27
RFFL-203ENST00000413582 PHLDA2Q53GA4 152 aa7.11□□□□□ -1.27
RFFL-203ENST00000413582 Q6ZWC4 215 aa7.11□□□□□ -1.27
RFFL-203ENST00000413582 TBC1D26Q86UD7 250 aa7.11□□□□□ -1.27
RFFL-203ENST00000413582 CADM3Q8N126 398 aa7.11□□□□□ -1.27
RFFL-203ENST00000413582 C12orf45Q8N5I9 185 aaPredicted RBP7.11□□□□□ -1.27
RFFL-203ENST00000413582 OR52B4Q8NGK2 314 aa7.11□□□□□ -1.27
RFFL-203ENST00000413582 PHLDA1Q8WV24 401 aaPredicted RBP7.11□□□□□ -1.27
RFFL-203ENST00000413582 SEC22CQ9BRL7 303 aa7.11□□□□□ -1.27
RFFL-203ENST00000413582 MED28Q9H204 178 aa7.11□□□□□ -1.27
RFFL-203ENST00000413582 A0A1B0GVG6 124 aa7.1□□□□□ -1.27
RFFL-203ENST00000413582 TMEM213A2RRL7 107 aa7.1□□□□□ -1.27
RFFL-203ENST00000413582 DBX1A6NMT0 343 aa7.1□□□□□ -1.27
RFFL-203ENST00000413582 SRRM4A7MD48 611 aaKnown RBP7.1□□□□□ -1.27
RFFL-203ENST00000413582 LINC00473A8K010 186 aa7.1□□□□□ -1.27
RFFL-203ENST00000413582 SPRY2O43597 315 aa7.1□□□□□ -1.27
RFFL-203ENST00000413582 ATG12O94817 140 aa7.1□□□□□ -1.27
RFFL-203ENST00000413582 CDS2O95674 445 aa7.1□□□□□ -1.27
RFFL-203ENST00000413582 RRASP10301 218 aa7.1□□□□□ -1.27
RFFL-203ENST00000413582 CBLN1P23435 193 aa7.1□□□□□ -1.27
RFFL-203ENST00000413582 DUTP33316 252 aaKnown RBP7.1□□□□□ -1.27
RFFL-203ENST00000413582 ATP5G2Q06055 141 aa7.1□□□□□ -1.27
RFFL-203ENST00000413582 CBX3Q13185 183 aa7.1□□□□□ -1.27
RFFL-203ENST00000413582 TMEM187Q14656 261 aa7.1□□□□□ -1.27
RFFL-203ENST00000413582 LGI3Q8N145 548 aa7.1□□□□□ -1.27
RFFL-203ENST00000413582 GLYATL2Q8WU03 294 aa7.1□□□□□ -1.27
RFFL-203ENST00000413582 SRSF12Q8WXF0 261 aaKnown RBP7.1□□□□□ -1.27
RFFL-203ENST00000413582 PPP1R14BQ96C90 147 aa7.1□□□□□ -1.27
RFFL-203ENST00000413582 TMEM56Q96MV1 263 aa7.1□□□□□ -1.27
RFFL-203ENST00000413582 AIFM2Q9BRQ8 373 aa7.1□□□□□ -1.27
RFFL-203ENST00000413582 TMEM222Q9H0R3 208 aa7.1□□□□□ -1.27
RFFL-203ENST00000413582 MLXQ9UH92 298 aa7.1□□□□□ -1.27
RFFL-203ENST00000413582 PRELID3BQ9Y3B1 194 aa7.1□□□□□ -1.27
RFFL-203ENST00000413582 TMEM56-RWDD3S4R434 201 aa7.1□□□□□ -1.27
RFFL-203ENST00000413582 A8MWP6 167 aa7.09□□□□□ -1.27
RFFL-203ENST00000413582 SSNA1O43805 119 aa7.09□□□□□ -1.27
RFFL-203ENST00000413582 GGCTO75223 188 aaKnown RBP7.09□□□□□ -1.27
RFFL-203ENST00000413582 SCAF4O95104 1147 aaKnown RBP7.09□□□□□ -1.27
RFFL-203ENST00000413582 SERPINE2P07093 398 aa7.09□□□□□ -1.27
RFFL-203ENST00000413582 OR5AC1P0C628 307 aa7.09□□□□□ -1.27
RFFL-203ENST00000413582 SULT1A3P0DMM9 295 aa7.09□□□□□ -1.27
RFFL-203ENST00000413582 SULT1A4P0DMN0 295 aa7.09□□□□□ -1.27
RFFL-203ENST00000413582 TNXAQ16473 311 aa7.09□□□□□ -1.27
RFFL-203ENST00000413582 PRSS8Q16651 343 aa7.09□□□□□ -1.27
RFFL-203ENST00000413582 C15orf32Q32M92 178 aa7.09□□□□□ -1.27
RFFL-203ENST00000413582 TM4SF20Q53R12 229 aa7.09□□□□□ -1.27
RFFL-203ENST00000413582 TMEM177Q53S58 311 aa7.09□□□□□ -1.27
RFFL-203ENST00000413582 FAM209BQ5JX69 171 aa7.09□□□□□ -1.27
RFFL-203ENST00000413582 TMEM217Q8N7C4 229 aa7.09□□□□□ -1.27
RFFL-203ENST00000413582 NECAP1Q8NC96 275 aa7.09□□□□□ -1.27
RFFL-203ENST00000413582 TMED3Q9Y3Q3 217 aa7.09□□□□□ -1.27
RFFL-203ENST00000413582 SHOXO15266 292 aa7.08□□□□□ -1.28
RFFL-203ENST00000413582 OR2C1O95371 312 aa7.08□□□□□ -1.28
RFFL-203ENST00000413582 HPRT1P00492 218 aa7.08□□□□□ -1.28
RFFL-203ENST00000413582 IFNA21P01568 189 aa7.08□□□□□ -1.28
RFFL-203ENST00000413582 SLC25A6P12236 298 aa7.08□□□□□ -1.28
RFFL-203ENST00000413582 APOC4P55056 127 aa7.08□□□□□ -1.28
RFFL-203ENST00000413582 RPL30P62888 115 aaKnown RBP7.08□□□□□ -1.28
RFFL-203ENST00000413582 CYCSP99999 105 aaKnown RBP7.08□□□□□ -1.28
RFFL-203ENST00000413582 ANKRD55Q3KP44 614 aa7.08□□□□□ -1.28
RFFL-203ENST00000413582 C10orf55Q5SWW7 151 aa7.08□□□□□ -1.28
RFFL-203ENST00000413582 BTNL8Q6UX41 500 aa7.08□□□□□ -1.28
RFFL-203ENST00000413582 FAM219AQ8IW50 185 aa7.08□□□□□ -1.28
RFFL-203ENST00000413582 TEX45Q8NA69 505 aa7.08□□□□□ -1.28
RFFL-203ENST00000413582 UXS1Q8NBZ7 420 aa7.08□□□□□ -1.28
RFFL-203ENST00000413582 TCTEX1D2Q8WW35 142 aa7.08□□□□□ -1.28
RFFL-203ENST00000413582 RBPMSQ93062 196 aaKnown RBP7.08□□□□□ -1.28
RFFL-203ENST00000413582 RNF183Q96D59 192 aa7.08□□□□□ -1.28
RFFL-203ENST00000413582 CCDC140Q96MF4 163 aa7.08□□□□□ -1.28
RFFL-203ENST00000413582 TP53RKQ96S44 253 aa7.08□□□□□ -1.28
RFFL-203ENST00000413582 GPHA2Q96T91 129 aa7.08□□□□□ -1.28
RFFL-203ENST00000413582 PLEKHA2Q9HB19 425 aa7.08□□□□□ -1.28
RFFL-203ENST00000413582 FAT2Q9NYQ8 4349 aa7.08□□□□□ -1.28
RFFL-203ENST00000413582 UBE2CO00762 179 aa7.07□□□□□ -1.28
RFFL-203ENST00000413582 TNFSF12O43508 249 aa7.07□□□□□ -1.28
RFFL-203ENST00000413582 OR2J3O76001 311 aa7.07□□□□□ -1.28
RFFL-203ENST00000413582 BRWD1-AS2P59051 145 aa7.07□□□□□ -1.28
RFFL-203ENST00000413582 UBE2KP61086 200 aa7.07□□□□□ -1.28
RFFL-203ENST00000413582 RTL8BQ17RB0 113 aa7.07□□□□□ -1.28
RFFL-203ENST00000413582 SP6Q3SY56 376 aa7.07□□□□□ -1.28
RFFL-203ENST00000413582 VMA21Q3ZAQ7 101 aa7.07□□□□□ -1.28
RFFL-203ENST00000413582 ZNF585BQ52M93 769 aa7.07□□□□□ -1.28
RFFL-203ENST00000413582 C19orf35Q6ZS72 473 aa7.07□□□□□ -1.28
RFFL-203ENST00000413582 GPHB5Q86YW7 130 aa7.07□□□□□ -1.28
RFFL-203ENST00000413582 SELENOHQ8IZQ5 122 aaKnown RBP7.07□□□□□ -1.28
RFFL-203ENST00000413582 SPAG16Q8N0X2 631 aa7.07□□□□□ -1.28
RFFL-203ENST00000413582 TTC9CQ8N5M4 171 aa7.07□□□□□ -1.28
RFFL-203ENST00000413582 OR51H1Q8NH63 302 aa7.07□□□□□ -1.28
RFFL-203ENST00000413582 OR4S2Q8NH73 311 aa7.07□□□□□ -1.28
RFFL-203ENST00000413582 LSM10Q969L4 123 aaKnown RBP7.07□□□□□ -1.28
RFFL-203ENST00000413582 OR2A7Q96R45 310 aa7.07□□□□□ -1.28
RFFL-203ENST00000413582 COMMD9Q9P000 198 aa7.07□□□□□ -1.28
RFFL-203ENST00000413582 CACFD1Q9UGQ2 172 aa7.07□□□□□ -1.28
RFFL-203ENST00000413582 KIR2DL5BA0A0G2JN68 375 aa7.06□□□□□ -1.28
RFFL-203ENST00000413582 KIR2DL5BA0A0G2JPC4 375 aa7.06□□□□□ -1.28
RFFL-203ENST00000413582 A0A1B0GVY2 172 aa7.06□□□□□ -1.28
RFFL-203ENST00000413582 PFDN1O60925 122 aa7.06□□□□□ -1.28
RFFL-203ENST00000413582 HRASP01112 189 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms