RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 CYB5BO43169 146 aa23.63■■□□□ 1.37
CSNK1E-206ENST00000413574 OR4F17Q8NGA8 305 aa23.63■■□□□ 1.37
CSNK1E-206ENST00000413574 OR1L6Q8NGR2 347 aa23.63■■□□□ 1.37
CSNK1E-206ENST00000413574 OR4F4Q96R69 305 aa23.63■■□□□ 1.37
CSNK1E-206ENST00000413574 THYN1Q9P016 225 aa23.63■■□□□ 1.37
CSNK1E-206ENST00000413574 MED6O75586 246 aa23.62■■□□□ 1.37
CSNK1E-206ENST00000413574 TRBV12-3P01733 135 aa23.62■■□□□ 1.37
CSNK1E-206ENST00000413574 HTR2BP41595 481 aa23.62■■□□□ 1.37
CSNK1E-206ENST00000413574 RUNX1Q01196 453 aa23.62■■□□□ 1.37
CSNK1E-206ENST00000413574 ZNF343Q6P1L6 599 aa23.62■■□□□ 1.37
CSNK1E-206ENST00000413574 SLC24A4Q8NFF2 622 aa23.62■■□□□ 1.37
CSNK1E-206ENST00000413574 OR11H1Q8NG94 326 aa23.62■■□□□ 1.37
CSNK1E-206ENST00000413574 PINX1Q96BK5 328 aaKnown RBP23.62■■□□□ 1.37
CSNK1E-206ENST00000413574 MBPP02686 304 aaPredicted RBP23.62■■□□□ 1.37
CSNK1E-206ENST00000413574 SUB1P53999 127 aaKnown RBP eCLIP23.62■■□□□ 1.371e-6■■■■■ 30.8
CSNK1E-206ENST00000413574 K7EIM0 57 aa23.61■■□□□ 1.37
CSNK1E-206ENST00000413574 CCL24O00175 119 aa23.61■■□□□ 1.37
CSNK1E-206ENST00000413574 IFNA10P01566 189 aa23.61■■□□□ 1.37
CSNK1E-206ENST00000413574 IGHV3-48P01763 117 aa23.61■■□□□ 1.37
CSNK1E-206ENST00000413574 SSSCA1O60232 199 aa23.6■■□□□ 1.37
CSNK1E-206ENST00000413574 PVRIGQ6DKI7 326 aa23.6■■□□□ 1.37
CSNK1E-206ENST00000413574 WDR89Q96FK6 387 aaPredicted RBP23.6■■□□□ 1.37
CSNK1E-206ENST00000413574 CCDC140Q96MF4 163 aa23.6■■□□□ 1.37
CSNK1E-206ENST00000413574 MGAT4CQ9UBM8 478 aa23.6■■□□□ 1.37
CSNK1E-206ENST00000413574 IGHV4OR15-8A0A075B7B6 117 aa23.59■■□□□ 1.37
CSNK1E-206ENST00000413574 A0A087WW49 117 aa23.59■■□□□ 1.37
CSNK1E-206ENST00000413574 NPY1RP25929 384 aa23.59■■□□□ 1.37
CSNK1E-206ENST00000413574 H2BFSP57053 126 aa23.59■■□□□ 1.37
CSNK1E-206ENST00000413574 C2orf83Q53S99 150 aa23.59■■□□□ 1.37
CSNK1E-206ENST00000413574 OR1N2Q8NGR9 330 aa23.59■■□□□ 1.37
CSNK1E-206ENST00000413574 SCARB1Q8WTV0 552 aa23.59■■□□□ 1.37
CSNK1E-206ENST00000413574 I3L2K1 104 aa23.59■■□□□ 1.37
CSNK1E-206ENST00000413574 MT-CO2P00403 227 aa23.59■■□□□ 1.37
CSNK1E-206ENST00000413574 IL15RAQ13261 267 aa23.59■■□□□ 1.37
CSNK1E-206ENST00000413574 EEF1AKMT3Q96AZ1 226 aa23.59■■□□□ 1.37
CSNK1E-206ENST00000413574 RCL1Q9Y2P8 373 aaKnown RBP23.59■■□□□ 1.37
CSNK1E-206ENST00000413574 U3KQ87 197 aa23.59■■□□□ 1.37
CSNK1E-206ENST00000413574 PF4P02776 101 aa23.58■■□□□ 1.36
CSNK1E-206ENST00000413574 CXorf58Q96LI9 332 aa23.58■■□□□ 1.36
CSNK1E-206ENST00000413574 LSM5Q9Y4Y9 91 aaKnown RBP23.58■■□□□ 1.36
CSNK1E-206ENST00000413574 H3BP45 60 aa23.57■■□□□ 1.36
CSNK1E-206ENST00000413574 TMEM50AO95807 157 aa23.57■■□□□ 1.36
CSNK1E-206ENST00000413574 MLANAQ16655 118 aa23.57■■□□□ 1.36
CSNK1E-206ENST00000413574 CLEC19AQ6UXS0 136 aa23.57■■□□□ 1.36
CSNK1E-206ENST00000413574 ZNF502Q8TBZ5 544 aa23.57■■□□□ 1.36
CSNK1E-206ENST00000413574 PEF1Q9UBV8 284 aaKnown RBP23.57■■□□□ 1.36
CSNK1E-206ENST00000413574 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP23.56■■□□□ 1.36
CSNK1E-206ENST00000413574 HSPB1P04792 205 aaKnown RBP23.56■■□□□ 1.36
CSNK1E-206ENST00000413574 VN1R17PQ8TDU5 208 aa23.56■■□□□ 1.36
CSNK1E-206ENST00000413574 CIB3Q96Q77 187 aaPredicted RBP23.56■■□□□ 1.36
CSNK1E-206ENST00000413574 C15orf62A8K5M9 175 aa23.55■■□□□ 1.36
CSNK1E-206ENST00000413574 PPP5D1E7EU14 171 aa23.55■■□□□ 1.36
CSNK1E-206ENST00000413574 K7EPK0 472 aa23.55■■□□□ 1.36
CSNK1E-206ENST00000413574 CXCL3P19876 107 aa23.55■■□□□ 1.36
CSNK1E-206ENST00000413574 MYCNOSP40205 109 aa23.55■■□□□ 1.36
CSNK1E-206ENST00000413574 PAX9P55771 341 aa23.55■■□□□ 1.36
CSNK1E-206ENST00000413574 ZNF616Q08AN1 781 aa23.55■■□□□ 1.36
CSNK1E-206ENST00000413574 FHL3Q13643 280 aa23.55■■□□□ 1.36
CSNK1E-206ENST00000413574 FCN2Q15485 313 aa23.55■■□□□ 1.36
CSNK1E-206ENST00000413574 DPF1Q92782 380 aa23.55■■□□□ 1.36
CSNK1E-206ENST00000413574 OR4C12Q96R67 309 aa23.55■■□□□ 1.36
CSNK1E-206ENST00000413574 MED28Q9H204 178 aa23.55■■□□□ 1.36
CSNK1E-206ENST00000413574 FNDC4Q9H6D8 234 aaPredicted RBP23.55■■□□□ 1.36
CSNK1E-206ENST00000413574 ZC4H2Q9NQZ6 224 aa23.55■■□□□ 1.36
CSNK1E-206ENST00000413574 RAB32Q13637 225 aa23.55■■□□□ 1.36
CSNK1E-206ENST00000413574 SPANXN5Q5MJ07 72 aa23.55■■□□□ 1.36
CSNK1E-206ENST00000413574 RANGRFQ9HD47 186 aaPredicted RBP23.55■■□□□ 1.36
CSNK1E-206ENST00000413574 PAIP2BQ9ULR5 123 aaKnown RBP23.55■■□□□ 1.36
CSNK1E-206ENST00000413574 TRBV7-1A0A0A6YYK4 115 aa23.54■■□□□ 1.36
CSNK1E-206ENST00000413574 LINC01619G3V211 115 aa23.54■■□□□ 1.36
CSNK1E-206ENST00000413574 OPRK1P41145 380 aa23.54■■□□□ 1.36
CSNK1E-206ENST00000413574 SLURP1P55000 103 aa23.54■■□□□ 1.36
CSNK1E-206ENST00000413574 S100A10P60903 97 aa23.54■■□□□ 1.36
CSNK1E-206ENST00000413574 UBAC2Q8NBM4 344 aa23.54■■□□□ 1.36
CSNK1E-206ENST00000413574 C21orf62Q9NYP8 219 aa23.54■■□□□ 1.36
CSNK1E-206ENST00000413574 PSENENQ9NZ42 101 aa23.54■■□□□ 1.36
CSNK1E-206ENST00000413574 CORTO00230 105 aa23.53■■□□□ 1.36
CSNK1E-206ENST00000413574 CLEC3BP05452 202 aa23.53■■□□□ 1.36
CSNK1E-206ENST00000413574 GPR183P32249 361 aa23.53■■□□□ 1.36
CSNK1E-206ENST00000413574 OR11H7Q8NGC8 314 aa23.53■■□□□ 1.36
CSNK1E-206ENST00000413574 NMES1Q9C002 83 aa23.53■■□□□ 1.36
CSNK1E-206ENST00000413574 F8W735 103 aaPredicted RBP23.52■■□□□ 1.36
CSNK1E-206ENST00000413574 BMPR1BO00238 502 aa23.52■■□□□ 1.36
CSNK1E-206ENST00000413574 PRR31Q5SQ13 230 aa23.52■■□□□ 1.36
CSNK1E-206ENST00000413574 SMIM8Q96KF7 97 aa23.52■■□□□ 1.36
CSNK1E-206ENST00000413574 MRPL36Q9P0J6 103 aaKnown RBP23.52■■□□□ 1.36
CSNK1E-206ENST00000413574 IFNA4P05014 189 aa23.51■■□□□ 1.35
CSNK1E-206ENST00000413574 LINC00482Q8N8I6 264 aa23.51■■□□□ 1.35
CSNK1E-206ENST00000413574 RNASEH2CQ8TDP1 164 aaKnown RBP23.51■■□□□ 1.35
CSNK1E-206ENST00000413574 RAB40CQ96S21 281 aa23.51■■□□□ 1.35
CSNK1E-206ENST00000413574 OR2T8A6NH00 312 aa23.51■■□□□ 1.35
CSNK1E-206ENST00000413574 LRRC37A5PQ49AS3 106 aa23.51■■□□□ 1.35
CSNK1E-206ENST00000413574 NOXA1Q86UR1 476 aa23.51■■□□□ 1.35
CSNK1E-206ENST00000413574 HOXD3P31249 432 aaPredicted RBP23.5■■□□□ 1.35
CSNK1E-206ENST00000413574 Q56UQ5 140 aa23.5■■□□□ 1.35
CSNK1E-206ENST00000413574 STRAPQ9Y3F4 350 aaKnown RBP23.5■■□□□ 1.35
CSNK1E-206ENST00000413574 OR8U8P0C7N1 319 aa23.49■■□□□ 1.35
CSNK1E-206ENST00000413574 ARL3P36405 182 aa23.49■■□□□ 1.35
CSNK1E-206ENST00000413574 RRAS2P62070 204 aaPredicted RBP23.49■■□□□ 1.35
CSNK1E-206ENST00000413574 ACSM6Q6P461 480 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms