RNA–Protein interactions for RNA: ENST00000413509.6

HDAC9-207, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-207ENST00000413509 PLGLAQ15195 96 aa6.53□□□□□ -1.36
HDAC9-207ENST00000413509 PXDC1Q5TGL8 231 aa6.53□□□□□ -1.36
HDAC9-207ENST00000413509 ASPHD1Q5U4P2 390 aa6.53□□□□□ -1.36
HDAC9-207ENST00000413509 CTRB2Q6GPI1 263 aa6.53□□□□□ -1.36
HDAC9-207ENST00000413509 BTNL8Q6UX41 500 aa6.53□□□□□ -1.36
HDAC9-207ENST00000413509 C5orf56Q8N8D9 126 aa6.53□□□□□ -1.36
HDAC9-207ENST00000413509 SCGB1C1Q8TD33 95 aa6.53□□□□□ -1.36
HDAC9-207ENST00000413509 ARPC1AQ92747 370 aa6.53□□□□□ -1.36
HDAC9-207ENST00000413509 RSG1Q9BU20 258 aa6.53□□□□□ -1.36
HDAC9-207ENST00000413509 NPCDR1Q9BY65 106 aa6.53□□□□□ -1.36
HDAC9-207ENST00000413509 PRDM13Q9H4Q3 707 aa6.53□□□□□ -1.36
HDAC9-207ENST00000413509 ZFHX3Q15911 3703 aa6.53□□□□□ -1.36
HDAC9-207ENST00000413509 TRAV1-1A0A0B4J248 108 aa6.52□□□□□ -1.37
HDAC9-207ENST00000413509 ZNF705EA8MWA4 302 aaPredicted RBP6.52□□□□□ -1.37
HDAC9-207ENST00000413509 NUDT19A8MXV4 375 aa6.52□□□□□ -1.37
HDAC9-207ENST00000413509 TSPAN9O75954 239 aa6.52□□□□□ -1.37
HDAC9-207ENST00000413509 AMY1AP04745 511 aa6.52□□□□□ -1.37
HDAC9-207ENST00000413509 OPRK1P41145 380 aa6.52□□□□□ -1.37
HDAC9-207ENST00000413509 GNB1P62873 340 aa6.52□□□□□ -1.37
HDAC9-207ENST00000413509 GAMTQ14353 236 aa6.52□□□□□ -1.37
HDAC9-207ENST00000413509 C19orf54Q5BKX5 351 aa6.52□□□□□ -1.37
HDAC9-207ENST00000413509 SLC25A24Q6NUK1 477 aa6.52□□□□□ -1.37
HDAC9-207ENST00000413509 TMEM182Q6ZP80 229 aaPredicted RBP6.52□□□□□ -1.37
HDAC9-207ENST00000413509 SLC16A13Q7RTY0 426 aa6.52□□□□□ -1.37
HDAC9-207ENST00000413509 C16orf82Q7Z2V1 217 aa6.52□□□□□ -1.37
HDAC9-207ENST00000413509 TMEM144Q7Z5S9 345 aa6.52□□□□□ -1.37
HDAC9-207ENST00000413509 COMMD7Q86VX2 200 aa6.52□□□□□ -1.37
HDAC9-207ENST00000413509 CIARTQ8N365 385 aaPredicted RBP6.52□□□□□ -1.37
HDAC9-207ENST00000413509 TTC9CQ8N5M4 171 aa6.52□□□□□ -1.37
HDAC9-207ENST00000413509 THAP8Q8NA92 274 aa6.52□□□□□ -1.37
HDAC9-207ENST00000413509 SSMEM1Q8WWF3 244 aa6.52□□□□□ -1.37
HDAC9-207ENST00000413509 MGST2Q99735 147 aa6.52□□□□□ -1.37
HDAC9-207ENST00000413509 GGTLC1Q9BX51 225 aa6.52□□□□□ -1.37
HDAC9-207ENST00000413509 FNDC4Q9H6D8 234 aaPredicted RBP6.52□□□□□ -1.37
HDAC9-207ENST00000413509 NPVFQ9HCQ7 196 aa6.52□□□□□ -1.37
HDAC9-207ENST00000413509 MOB4Q9Y3A3 225 aa6.52□□□□□ -1.37
HDAC9-207ENST00000413509 SOX21Q9Y651 276 aaPredicted RBP6.52□□□□□ -1.37
HDAC9-207ENST00000413509 IGKV1OR2-108A0A075B7D4 117 aa6.51□□□□□ -1.37
HDAC9-207ENST00000413509 RAB19A4D1S5 217 aa6.51□□□□□ -1.37
HDAC9-207ENST00000413509 NCBP2LA6PVI3 153 aaKnown RBP6.51□□□□□ -1.37
HDAC9-207ENST00000413509 I3L2K1 104 aa6.51□□□□□ -1.37
HDAC9-207ENST00000413509 CORTO00230 105 aa6.51□□□□□ -1.37
HDAC9-207ENST00000413509 CNIH1O95406 144 aa6.51□□□□□ -1.37
HDAC9-207ENST00000413509 REG1AP05451 166 aa6.51□□□□□ -1.37
HDAC9-207ENST00000413509 FHITP49789 147 aa6.51□□□□□ -1.37
HDAC9-207ENST00000413509 TMEM41BQ5BJD5 291 aa6.51□□□□□ -1.37
HDAC9-207ENST00000413509 AKR1C8PQ5T2L2 129 aa6.51□□□□□ -1.37
HDAC9-207ENST00000413509 ACSM6Q6P461 480 aa6.51□□□□□ -1.37
HDAC9-207ENST00000413509 IL34Q6ZMJ4 242 aa6.51□□□□□ -1.37
HDAC9-207ENST00000413509 Q6ZRG5 221 aa6.51□□□□□ -1.37
HDAC9-207ENST00000413509 OR1L6Q8NGR2 347 aa6.51□□□□□ -1.37
HDAC9-207ENST00000413509 SGMS2Q8NHU3 365 aa6.51□□□□□ -1.37
HDAC9-207ENST00000413509 NANPQ8TBE9 248 aa6.51□□□□□ -1.37
HDAC9-207ENST00000413509 MBD3L1Q8WWY6 194 aa6.51□□□□□ -1.37
HDAC9-207ENST00000413509 SSX3Q99909 188 aa6.51□□□□□ -1.37
HDAC9-207ENST00000413509 HSPB9Q9BQS6 159 aa6.51□□□□□ -1.37
HDAC9-207ENST00000413509 SLC25A33Q9BSK2 321 aa6.51□□□□□ -1.37
HDAC9-207ENST00000413509 KCNIP2Q9NS61 270 aa6.51□□□□□ -1.37
HDAC9-207ENST00000413509 RPRMQ9NS64 109 aa6.51□□□□□ -1.37
HDAC9-207ENST00000413509 SLC45A2Q9UMX9 530 aa6.51□□□□□ -1.37
HDAC9-207ENST00000413509 FAM96BQ9Y3D0 163 aa6.51□□□□□ -1.37
HDAC9-207ENST00000413509 FBXO7Q9Y3I1 522 aa6.51□□□□□ -1.37
HDAC9-207ENST00000413509 SONP18583 2426 aaKnown RBP6.51□□□□□ -1.37
HDAC9-207ENST00000413509 IGLV11-55A0A075B6I3 123 aa6.5□□□□□ -1.37
HDAC9-207ENST00000413509 IGKV1D-37A0A075B6S9 117 aa6.5□□□□□ -1.37
HDAC9-207ENST00000413509 SEC14L6B5MCN3 397 aa6.5□□□□□ -1.37
HDAC9-207ENST00000413509 C17orf112F2Z3M2 114 aa6.5□□□□□ -1.37
HDAC9-207ENST00000413509 H3BUX3 64 aa6.5□□□□□ -1.37
HDAC9-207ENST00000413509 K7EIM0 57 aa6.5□□□□□ -1.37
HDAC9-207ENST00000413509 M0QZK8 103 aa6.5□□□□□ -1.37
HDAC9-207ENST00000413509 AGPAT2O15120 278 aa6.5□□□□□ -1.37
HDAC9-207ENST00000413509 YIF1AO95070 293 aa6.5□□□□□ -1.37
HDAC9-207ENST00000413509 MBP02144 154 aa6.5□□□□□ -1.37
HDAC9-207ENST00000413509 RPL29P47914 159 aaKnown RBP6.5□□□□□ -1.37
HDAC9-207ENST00000413509 CAMLGP49069 296 aa6.5□□□□□ -1.37
HDAC9-207ENST00000413509 PRR20EP86478 221 aa6.5□□□□□ -1.37
HDAC9-207ENST00000413509 PRR20CP86479 221 aa6.5□□□□□ -1.37
HDAC9-207ENST00000413509 PRR20DP86480 221 aa6.5□□□□□ -1.37
HDAC9-207ENST00000413509 PRR20BP86481 221 aa6.5□□□□□ -1.37
HDAC9-207ENST00000413509 PRR20AP86496 221 aa6.5□□□□□ -1.37
HDAC9-207ENST00000413509 PMS2P11Q13670 270 aa6.5□□□□□ -1.37
HDAC9-207ENST00000413509 ZNF726P1Q15940 193 aa6.5□□□□□ -1.37
HDAC9-207ENST00000413509 DEFB112Q30KQ8 113 aa6.5□□□□□ -1.37
HDAC9-207ENST00000413509 ETFRF1Q6IPR1 90 aa6.5□□□□□ -1.37
HDAC9-207ENST00000413509 SPSB3Q6PJ21 355 aa6.5□□□□□ -1.37
HDAC9-207ENST00000413509 TEPPQ6URK8 271 aa6.5□□□□□ -1.37
HDAC9-207ENST00000413509 C19orf35Q6ZS72 473 aa6.5□□□□□ -1.37
HDAC9-207ENST00000413509 BCL6BQ8N143 479 aaPredicted RBP6.5□□□□□ -1.37
HDAC9-207ENST00000413509 COMMD1Q8N668 190 aa6.5□□□□□ -1.37
HDAC9-207ENST00000413509 TEX29Q8N6K0 151 aa6.5□□□□□ -1.37
HDAC9-207ENST00000413509 TMEM116Q8NCL8 245 aa6.5□□□□□ -1.37
HDAC9-207ENST00000413509 MARC2Q969Z3 335 aa6.5□□□□□ -1.37
HDAC9-207ENST00000413509 RCC1LQ96I51 464 aaKnown RBP6.5□□□□□ -1.37
HDAC9-207ENST00000413509 TMEM68Q96MH6 324 aa6.5□□□□□ -1.37
HDAC9-207ENST00000413509 FANCD2OSQ96PS1 177 aa6.5□□□□□ -1.37
HDAC9-207ENST00000413509 RASL11BQ9BPW5 248 aa6.5□□□□□ -1.37
HDAC9-207ENST00000413509 SCRT1Q9BWW7 348 aa6.5□□□□□ -1.37
HDAC9-207ENST00000413509 MRPL36Q9P0J6 103 aaKnown RBP6.5□□□□□ -1.37
HDAC9-207ENST00000413509 PFDN2Q9UHV9 154 aa6.5□□□□□ -1.37
HDAC9-207ENST00000413509 ZNF580Q9UK33 172 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms