RNA–Protein interactions for RNA: ENST00000413137.6

RHBDD3-203, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-203ENST00000413137 SUB1P53999 127 aaKnown RBP eCLIP20.23■□□□□ 0.83
RHBDD3-203ENST00000413137 KLHDC1Q8N7A1 406 aa20.23■□□□□ 0.83
RHBDD3-203ENST00000413137 WIPF2Q8TF74 440 aaPredicted RBP20.23■□□□□ 0.83
RHBDD3-203ENST00000413137 TNFSF18Q9UNG2 199 aa20.23■□□□□ 0.83
RHBDD3-203ENST00000413137 TRBV9A0A0B4J1U6 114 aa20.22■□□□□ 0.83
RHBDD3-203ENST00000413137 ARPC5O15511 151 aa20.22■□□□□ 0.83
RHBDD3-203ENST00000413137 NDUFB8O95169 186 aa20.22■□□□□ 0.83
RHBDD3-203ENST00000413137 IFNA4P05014 189 aa20.22■□□□□ 0.83
RHBDD3-203ENST00000413137 RPL12P30050 165 aaKnown RBP20.22■□□□□ 0.83
RHBDD3-203ENST00000413137 RPP30P78346 268 aaKnown RBP20.22■□□□□ 0.83
RHBDD3-203ENST00000413137 KRTAP24-1Q3LI83 254 aa20.22■□□□□ 0.83
RHBDD3-203ENST00000413137 OR8G2PQ6IF36 304 aa20.22■□□□□ 0.83
RHBDD3-203ENST00000413137 TMEM65Q6PI78 240 aa20.22■□□□□ 0.83
RHBDD3-203ENST00000413137 ETV3LQ6ZN32 361 aa20.22■□□□□ 0.83
RHBDD3-203ENST00000413137 GON7Q9BXV9 100 aa20.22■□□□□ 0.83
RHBDD3-203ENST00000413137 RNF114Q9Y508 228 aa20.22■□□□□ 0.83
RHBDD3-203ENST00000413137 CLPSL1A2RUU4 121 aa20.21■□□□□ 0.83
RHBDD3-203ENST00000413137 RNF222A6NCQ9 220 aa20.21■□□□□ 0.83
RHBDD3-203ENST00000413137 PRSS46E5RG02 174 aa20.21■□□□□ 0.83
RHBDD3-203ENST00000413137 HAX1O00165 279 aa20.21■□□□□ 0.83
RHBDD3-203ENST00000413137 IGHV3-48P01763 117 aa20.21■□□□□ 0.83
RHBDD3-203ENST00000413137 PF4V1P10720 104 aa20.21■□□□□ 0.83
RHBDD3-203ENST00000413137 EWSR1Q01844 656 aaKnown RBP eCLIP20.21■□□□□ 0.83
RHBDD3-203ENST00000413137 KLK9Q2XQG4 91 aa20.21■□□□□ 0.83
RHBDD3-203ENST00000413137 PINX1Q96BK5 328 aaKnown RBP20.21■□□□□ 0.83
RHBDD3-203ENST00000413137 FNDC4Q9H6D8 234 aaPredicted RBP20.21■□□□□ 0.83
RHBDD3-203ENST00000413137 KLK9Q9UKQ9 250 aa20.21■□□□□ 0.83
RHBDD3-203ENST00000413137 PSMB8P28062 276 aa20.21■□□□□ 0.83
RHBDD3-203ENST00000413137 TMEM217Q8N7C4 229 aa20.21■□□□□ 0.83
RHBDD3-203ENST00000413137 OR5AU1Q8NGC0 362 aa20.21■□□□□ 0.83
RHBDD3-203ENST00000413137 S4R3C0 116 aa20.21■□□□□ 0.83
RHBDD3-203ENST00000413137 FBN1P35555 2871 aaKnown RBP20.2■□□□□ 0.83
RHBDD3-203ENST00000413137 TRGV3P03979 118 aa20.2■□□□□ 0.82
RHBDD3-203ENST00000413137 PROK1P58294 105 aa20.2■□□□□ 0.82
RHBDD3-203ENST00000413137 RAB11AP62491 216 aa20.2■□□□□ 0.82
RHBDD3-203ENST00000413137 SLC35B1P78383 322 aa20.2■□□□□ 0.82
RHBDD3-203ENST00000413137 RHOGP84095 191 aa20.2■□□□□ 0.82
RHBDD3-203ENST00000413137 ZFP69Q49AA0 526 aa20.2■□□□□ 0.82
RHBDD3-203ENST00000413137 TCTEX1D4Q5JR98 221 aa20.2■□□□□ 0.82
RHBDD3-203ENST00000413137 FBXL7Q9UJT9 491 aa20.2■□□□□ 0.82
RHBDD3-203ENST00000413137 I3L2K1 104 aa20.19■□□□□ 0.82
RHBDD3-203ENST00000413137 K7EIM0 57 aa20.19■□□□□ 0.82
RHBDD3-203ENST00000413137 SULT1A1P50225 295 aa20.19■□□□□ 0.82
RHBDD3-203ENST00000413137 RAB9AP51151 201 aa20.19■□□□□ 0.82
RHBDD3-203ENST00000413137 NKX2-5P52952 324 aaPredicted RBP20.19■□□□□ 0.82
RHBDD3-203ENST00000413137 AP2S1P53680 142 aaPredicted RBP20.19■□□□□ 0.82
RHBDD3-203ENST00000413137 ATP5IP56385 69 aaPredicted RBP20.19■□□□□ 0.82
RHBDD3-203ENST00000413137 TEX38Q6PEX7 206 aa20.19■□□□□ 0.82
RHBDD3-203ENST00000413137 AQP10Q96PS8 301 aa20.19■□□□□ 0.82
RHBDD3-203ENST00000413137 MT-CO2P00403 227 aa20.18■□□□□ 0.82
RHBDD3-203ENST00000413137 TPPP2P59282 170 aa20.18■□□□□ 0.82
RHBDD3-203ENST00000413137 NOXA1Q86UR1 476 aa20.18■□□□□ 0.82
RHBDD3-203ENST00000413137 OR1L6Q8NGR2 347 aa20.18■□□□□ 0.82
RHBDD3-203ENST00000413137 SLC25A31Q9H0C2 315 aa20.18■□□□□ 0.82
RHBDD3-203ENST00000413137 MRPL36Q9P0J6 103 aaKnown RBP20.18■□□□□ 0.82
RHBDD3-203ENST00000413137 HMSDA8MTL9 139 aa20.17■□□□□ 0.82
RHBDD3-203ENST00000413137 H3BUA1 57 aa20.17■□□□□ 0.82
RHBDD3-203ENST00000413137 BOLA2-SMG1P6H3BVE0 249 aa20.17■□□□□ 0.82
RHBDD3-203ENST00000413137 BRI3O95415 125 aa20.17■□□□□ 0.82
RHBDD3-203ENST00000413137 RPLP1P05386 114 aaKnown RBP20.17■□□□□ 0.82
RHBDD3-203ENST00000413137 CXCL2P19875 107 aa20.17■□□□□ 0.82
RHBDD3-203ENST00000413137 FOXE3Q13461 319 aa20.17■□□□□ 0.82
RHBDD3-203ENST00000413137 KIAA0141Q14154 515 aaPredicted RBP20.17■□□□□ 0.82
RHBDD3-203ENST00000413137 RNASEH2CQ8TDP1 164 aaKnown RBP20.17■□□□□ 0.82
RHBDD3-203ENST00000413137 MFSD2BA6NFX1 497 aa20.17■□□□□ 0.82
RHBDD3-203ENST00000413137 IGHV3-23P01764 117 aa20.17■□□□□ 0.82
RHBDD3-203ENST00000413137 OPRK1P41145 380 aa20.17■□□□□ 0.82
RHBDD3-203ENST00000413137 EIF2B2P49770 351 aaKnown RBP20.17■□□□□ 0.82
RHBDD3-203ENST00000413137 C15orf32Q32M92 178 aa20.17■□□□□ 0.82
RHBDD3-203ENST00000413137 STX12Q86Y82 276 aa20.17■□□□□ 0.82
RHBDD3-203ENST00000413137 C11orf44Q8N8P7 122 aa20.17■□□□□ 0.82
RHBDD3-203ENST00000413137 INO80EQ8NBZ0 244 aaPredicted RBP20.17■□□□□ 0.82
RHBDD3-203ENST00000413137 MFFQ9GZY8 342 aa20.17■□□□□ 0.82
RHBDD3-203ENST00000413137 HSPB11Q9Y547 144 aa20.17■□□□□ 0.82
RHBDD3-203ENST00000413137 HIST1H1BP16401 226 aaKnown RBP20.16■□□□□ 0.82
RHBDD3-203ENST00000413137 KRTAP10-3P60369 221 aa20.16■□□□□ 0.82
RHBDD3-203ENST00000413137 NECAP1Q8NC96 275 aa20.16■□□□□ 0.82
RHBDD3-203ENST00000413137 OR10P1Q8NGE3 313 aa20.16■□□□□ 0.82
RHBDD3-203ENST00000413137 SCARB1Q8WTV0 552 aa20.16■□□□□ 0.82
RHBDD3-203ENST00000413137 ZC4H2Q9NQZ6 224 aa20.16■□□□□ 0.82
RHBDD3-203ENST00000413137 ELANEP08246 267 aa20.15■□□□□ 0.82
RHBDD3-203ENST00000413137 CD69Q07108 199 aa20.15■□□□□ 0.82
RHBDD3-203ENST00000413137 ACOT7LQ6ZUV0 252 aa20.15■□□□□ 0.82
RHBDD3-203ENST00000413137 RNF152Q8N8N0 203 aa20.15■□□□□ 0.82
RHBDD3-203ENST00000413137 HYLS1Q96M11 299 aa20.15■□□□□ 0.82
RHBDD3-203ENST00000413137 SMIM3Q9BZL3 60 aa20.15■□□□□ 0.82
RHBDD3-203ENST00000413137 TMEM89A2RUT3 159 aa20.14■□□□□ 0.81
RHBDD3-203ENST00000413137 CD28P10747 220 aa20.14■□□□□ 0.81
RHBDD3-203ENST00000413137 SLC38A11Q08AI6 406 aa20.14■□□□□ 0.81
RHBDD3-203ENST00000413137 OR5C1Q8NGR4 320 aa20.14■□□□□ 0.81
RHBDD3-203ENST00000413137 SLA2Q9H6Q3 261 aa20.14■□□□□ 0.81
RHBDD3-203ENST00000413137 WFDC1Q9HC57 220 aa20.14■□□□□ 0.81
RHBDD3-203ENST00000413137 CORTO00230 105 aa20.13■□□□□ 0.81
RHBDD3-203ENST00000413137 CYB5BO43169 146 aa20.13■□□□□ 0.81
RHBDD3-203ENST00000413137 NUP62P37198 522 aaPredicted RBP20.13■□□□□ 0.81
RHBDD3-203ENST00000413137 BAXQ07812 192 aa20.13■□□□□ 0.81
RHBDD3-203ENST00000413137 EXOSC2Q13868 293 aaKnown RBP20.13■□□□□ 0.81
RHBDD3-203ENST00000413137 CLINT1Q14677 625 aa20.13■□□□□ 0.81
RHBDD3-203ENST00000413137 LGALSLQ3ZCW2 172 aaPredicted RBP20.13■□□□□ 0.81
RHBDD3-203ENST00000413137 SLC16A13Q7RTY0 426 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms