RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 SERPINB11Q96P15 392 aa-0.98□□□□□ -2.57
RNU2-55P-201ENST00000411146 TIPINQ9BVW5 301 aa-0.98□□□□□ -2.57
RNU2-55P-201ENST00000411146 COMMD5Q9GZQ3 224 aa-0.98□□□□□ -2.57
RNU2-55P-201ENST00000411146 METTL9Q9H1A3 318 aa-0.98□□□□□ -2.57
RNU2-55P-201ENST00000411146 EURLQ9NYK6 297 aa-0.98□□□□□ -2.57
RNU2-55P-201ENST00000411146 BZW2Q9Y6E2 419 aaKnown RBP-0.98□□□□□ -2.57
RNU2-55P-201ENST00000411146 MAP1AP78559 2803 aaPredicted RBP-0.98□□□□□ -2.57
RNU2-55P-201ENST00000411146 RBBP6Q7Z6E9 1792 aaKnown RBP-0.98□□□□□ -2.57
RNU2-55P-201ENST00000411146 ALMS1Q8TCU4 4167 aa-0.99□□□□□ -2.57
RNU2-55P-201ENST00000411146 IGHV1-58A0A0C4DH39 117 aa-0.99□□□□□ -2.57
RNU2-55P-201ENST00000411146 TRBV30A0A0K0K1B3 111 aa-0.99□□□□□ -2.57
RNU2-55P-201ENST00000411146 C5orf49A4QMS7 147 aa-0.99□□□□□ -2.57
RNU2-55P-201ENST00000411146 H0YIV9 168 aa-0.99□□□□□ -2.57
RNU2-55P-201ENST00000411146 SRP19P09132 144 aaKnown RBP-0.99□□□□□ -2.57
RNU2-55P-201ENST00000411146 LCN1P31025 176 aa-0.99□□□□□ -2.57
RNU2-55P-201ENST00000411146 CLDN12P56749 244 aa-0.99□□□□□ -2.57
RNU2-55P-201ENST00000411146 STK38Q15208 465 aa-0.99□□□□□ -2.57
RNU2-55P-201ENST00000411146 CLEC12BQ2HXU8 276 aa-0.99□□□□□ -2.57
RNU2-55P-201ENST00000411146 HLA-DRB5Q30154 266 aa-0.99□□□□□ -2.57
RNU2-55P-201ENST00000411146 C1orf194Q5T5A4 169 aa-0.99□□□□□ -2.57
RNU2-55P-201ENST00000411146 BPIFA4PQ86YQ2 179 aa-0.99□□□□□ -2.57
RNU2-55P-201ENST00000411146 CLVS1Q8IUQ0 354 aaPredicted RBP-0.99□□□□□ -2.57
RNU2-55P-201ENST00000411146 PRR15Q8IV56 129 aa-0.99□□□□□ -2.57
RNU2-55P-201ENST00000411146 OR4E2Q8NGC2 313 aa-0.99□□□□□ -2.57
RNU2-55P-201ENST00000411146 OR5A1Q8NGJ0 315 aa-0.99□□□□□ -2.57
RNU2-55P-201ENST00000411146 STOML3Q8TAV4 291 aa-0.99□□□□□ -2.57
RNU2-55P-201ENST00000411146 RASSF5Q8WWW0 418 aa-0.99□□□□□ -2.57
RNU2-55P-201ENST00000411146 BCL7BQ9BQE9 202 aa-0.99□□□□□ -2.57
RNU2-55P-201ENST00000411146 EFCAB1Q9HAE3 211 aa-0.99□□□□□ -2.57
RNU2-55P-201ENST00000411146 RSL24D1Q9UHA3 163 aaKnown RBP-0.99□□□□□ -2.57
RNU2-55P-201ENST00000411146 EPDR1Q9UM22 224 aa-0.99□□□□□ -2.57
RNU2-55P-201ENST00000411146 PIK3R4Q99570 1358 aa-0.99□□□□□ -2.57
RNU2-55P-201ENST00000411146 DOCK5Q9H7D0 1870 aa-0.99□□□□□ -2.57
RNU2-55P-201ENST00000411146 RIC1Q4ADV7 1423 aa-0.99□□□□□ -2.57
RNU2-55P-201ENST00000411146 FAAHO00519 579 aa-1□□□□□ -2.57
RNU2-55P-201ENST00000411146 KRT75O95678 551 aa-1□□□□□ -2.57
RNU2-55P-201ENST00000411146 LY6G6CO95867 125 aa-1□□□□□ -2.57
RNU2-55P-201ENST00000411146 CSTAP01040 98 aa-1□□□□□ -2.57
RNU2-55P-201ENST00000411146 IGKV1-5P01602 117 aa-1□□□□□ -2.57
RNU2-55P-201ENST00000411146 PRM2P04554 102 aa-1□□□□□ -2.57
RNU2-55P-201ENST00000411146 BAALC-AS2P0C853 105 aa-1□□□□□ -2.57
RNU2-55P-201ENST00000411146 PVALBP20472 110 aaPredicted RBP-1□□□□□ -2.57
RNU2-55P-201ENST00000411146 MAP3K7CLP57077 242 aa-1□□□□□ -2.57
RNU2-55P-201ENST00000411146 STX3Q13277 289 aa-1□□□□□ -2.57
RNU2-55P-201ENST00000411146 RHEBQ15382 184 aa-1□□□□□ -2.57
RNU2-55P-201ENST00000411146 LINC01554Q52M75 96 aa-1□□□□□ -2.57
RNU2-55P-201ENST00000411146 KHDC3LQ587J8 217 aa-1□□□□□ -2.57
RNU2-55P-201ENST00000411146 AADACL3Q5VUY0 350 aa-1□□□□□ -2.57
RNU2-55P-201ENST00000411146 OR52E4Q8NGH9 312 aa-1□□□□□ -2.57
RNU2-55P-201ENST00000411146 OR10J5Q8NHC4 309 aa-1□□□□□ -2.57
RNU2-55P-201ENST00000411146 DERL1Q9BUN8 251 aa-1□□□□□ -2.57
RNU2-55P-201ENST00000411146 PROK2Q9HC23 129 aa-1□□□□□ -2.57
RNU2-55P-201ENST00000411146 ASCL3Q9NQ33 180 aa-1□□□□□ -2.57
RNU2-55P-201ENST00000411146 TNFSF18Q9UNG2 199 aa-1□□□□□ -2.57
RNU2-55P-201ENST00000411146 PXMP4Q9Y6I8 212 aa-1□□□□□ -2.57
RNU2-55P-201ENST00000411146 SCN8AQ9UQD0 1980 aa-1□□□□□ -2.57
RNU2-55P-201ENST00000411146 CECR2Q9BXF3 1484 aa-1□□□□□ -2.57
RNU2-55P-201ENST00000411146 CADP27708 2225 aa-1.01□□□□□ -2.57
RNU2-55P-201ENST00000411146 ACOX3O15254 700 aa-1.01□□□□□ -2.57
RNU2-55P-201ENST00000411146 NUPR1O60356 82 aa-1.01□□□□□ -2.57
RNU2-55P-201ENST00000411146 CCL4P13236 92 aa-1.01□□□□□ -2.57
RNU2-55P-201ENST00000411146 CXCR4P61073 352 aa-1.01□□□□□ -2.57
RNU2-55P-201ENST00000411146 TNNC1P63316 161 aa-1.01□□□□□ -2.57
RNU2-55P-201ENST00000411146 HAGHLQ6PII5 290 aaPredicted RBP-1.01□□□□□ -2.57
RNU2-55P-201ENST00000411146 Q86TA4 180 aa-1.01□□□□□ -2.57
RNU2-55P-201ENST00000411146 PSMF1Q92530 271 aa-1.01□□□□□ -2.57
RNU2-55P-201ENST00000411146 SCGB3A1Q96QR1 104 aa-1.01□□□□□ -2.57
RNU2-55P-201ENST00000411146 MS4A6AQ9H2W1 248 aa-1.01□□□□□ -2.57
RNU2-55P-201ENST00000411146 XPNPEP1Q9NQW7 623 aa-1.01□□□□□ -2.57
RNU2-55P-201ENST00000411146 CHCHD2Q9Y6H1 151 aaPredicted RBP-1.01□□□□□ -2.57
RNU2-55P-201ENST00000411146 BSNQ9UPA5 3926 aa-1.01□□□□□ -2.57
RNU2-55P-201ENST00000411146 CSMD3Q7Z407 3707 aa-1.01□□□□□ -2.57
RNU2-55P-201ENST00000411146 PTPRDP23468 1912 aa-1.01□□□□□ -2.57
RNU2-55P-201ENST00000411146 APC2O95996 2303 aa-1.01□□□□□ -2.57
RNU2-55P-201ENST00000411146 IGHV1-69-2A0A0G2JMI3 117 aa-1.02□□□□□ -2.57
RNU2-55P-201ENST00000411146 A0A0J9YY10 115 aa-1.02□□□□□ -2.57
RNU2-55P-201ENST00000411146 A0A1B0GX78 115 aa-1.02□□□□□ -2.57
RNU2-55P-201ENST00000411146 OR4C45A6NMZ5 311 aa-1.02□□□□□ -2.57
RNU2-55P-201ENST00000411146 MGAMO43451 1857 aa-1.02□□□□□ -2.57
RNU2-55P-201ENST00000411146 RD3LP0DJH9 198 aa-1.02□□□□□ -2.57
RNU2-55P-201ENST00000411146 LRPPRCP42704 1394 aaKnown RBP-1.02□□□□□ -2.57
RNU2-55P-201ENST00000411146 POLR2GP62487 172 aaKnown RBP eCLIP-1.02□□□□□ -2.57
RNU2-55P-201ENST00000411146 EBPQ15125 230 aaKnown RBP-1.02□□□□□ -2.57
RNU2-55P-201ENST00000411146 GUK1Q16774 197 aa-1.02□□□□□ -2.57
RNU2-55P-201ENST00000411146 CDKL4Q5MAI5 379 aa-1.02□□□□□ -2.57
RNU2-55P-201ENST00000411146 ITFG2Q969R8 447 aa-1.02□□□□□ -2.57
RNU2-55P-201ENST00000411146 IMP4Q96G21 291 aaKnown RBP-1.02□□□□□ -2.57
RNU2-55P-201ENST00000411146 GINS4Q9BRT9 223 aa-1.02□□□□□ -2.57
RNU2-55P-201ENST00000411146 DERL2Q9GZP9 239 aa-1.02□□□□□ -2.57
RNU2-55P-201ENST00000411146 MIXL1Q9H2W2 232 aa-1.02□□□□□ -2.57
RNU2-55P-201ENST00000411146 C14orf105Q9NVL8 296 aa-1.02□□□□□ -2.57
RNU2-55P-201ENST00000411146 AK3Q9UIJ7 227 aa-1.02□□□□□ -2.57
RNU2-55P-201ENST00000411146 MAP1BP46821 2468 aaKnown RBP-1.03□□□□□ -2.57
RNU2-55P-201ENST00000411146 COL6A3P12111 3177 aa-1.03□□□□□ -2.57
RNU2-55P-201ENST00000411146 TEX50A0A1B0GTY4 177 aa-1.03□□□□□ -2.57
RNU2-55P-201ENST00000411146 ATP6V1G2O95670 118 aa-1.03□□□□□ -2.57
RNU2-55P-201ENST00000411146 CD14P08571 375 aa-1.03□□□□□ -2.57
RNU2-55P-201ENST00000411146 CCL2P13500 99 aa-1.03□□□□□ -2.57
RNU2-55P-201ENST00000411146 MAP2K4P45985 399 aa-1.03□□□□□ -2.57
RNU2-55P-201ENST00000411146 FXYD6P3P58550 94 aa-1.03□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms