RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 ZNF430Q9H8G1 570 aaPredicted RBP10.97□□□□□ -0.65
LIMS1-205ENST00000410093 NOTCH2Q04721 2471 aa10.96□□□□□ -0.65
LIMS1-205ENST00000410093 TRBV24-1A0A075B6N3 115 aa10.96□□□□□ -0.65
LIMS1-205ENST00000410093 ACTL6BO94805 426 aa10.96□□□□□ -0.65
LIMS1-205ENST00000410093 AREGP15514 252 aa10.96□□□□□ -0.65
LIMS1-205ENST00000410093 REG1BP48304 166 aa10.96□□□□□ -0.65
LIMS1-205ENST00000410093 GAMTQ14353 236 aa10.96□□□□□ -0.65
LIMS1-205ENST00000410093 ELOBQ15370 118 aa10.96□□□□□ -0.65
LIMS1-205ENST00000410093 LCE2DQ5TA82 110 aaPredicted RBP10.96□□□□□ -0.65
LIMS1-205ENST00000410093 SLC16A13Q7RTY0 426 aa10.96□□□□□ -0.65
LIMS1-205ENST00000410093 KIR3DL3Q8N743 410 aa10.96□□□□□ -0.65
LIMS1-205ENST00000410093 OR11H6Q8NGC7 330 aa10.96□□□□□ -0.65
LIMS1-205ENST00000410093 GATAD1Q8WUU5 269 aa10.96□□□□□ -0.65
LIMS1-205ENST00000410093 PFDN5Q99471 154 aa10.96□□□□□ -0.65
LIMS1-205ENST00000410093 TMPRSS5Q9H3S3 457 aa10.96□□□□□ -0.65
LIMS1-205ENST00000410093 TECRQ9NZ01 308 aaKnown RBP10.96□□□□□ -0.65
LIMS1-205ENST00000410093 ZNRD1Q9P1U0 126 aa10.96□□□□□ -0.65
LIMS1-205ENST00000410093 FUT9Q9Y231 359 aa10.96□□□□□ -0.65
LIMS1-205ENST00000410093 ANKHD1Q8IWZ3 2542 aaKnown RBP10.96□□□□□ -0.66
LIMS1-205ENST00000410093 IGHV1-3A0A0C4DH29 117 aa10.95□□□□□ -0.66
LIMS1-205ENST00000410093 PPP1R2P9O14990 202 aa10.95□□□□□ -0.66
LIMS1-205ENST00000410093 CRYGBP07316 175 aa10.95□□□□□ -0.66
LIMS1-205ENST00000410093 LINC00869P0C866 280 aa10.95□□□□□ -0.66
LIMS1-205ENST00000410093 ARL14EPLP0DKL9 152 aa10.95□□□□□ -0.66
LIMS1-205ENST00000410093 S100PP25815 95 aa10.95□□□□□ -0.66
LIMS1-205ENST00000410093 GCHFRP30047 84 aa10.95□□□□□ -0.66
LIMS1-205ENST00000410093 C22orf15Q8WYQ4 148 aa10.95□□□□□ -0.66
LIMS1-205ENST00000410093 RPEQ96AT9 228 aa10.95□□□□□ -0.66
LIMS1-205ENST00000410093 UHRF2Q96PU4 802 aa10.95□□□□□ -0.66
LIMS1-205ENST00000410093 UNC79Q9P2D8 2635 aa10.95□□□□□ -0.66
LIMS1-205ENST00000410093 OOSP1A8MZH6 123 aa10.94□□□□□ -0.66
LIMS1-205ENST00000410093 LY6LH3BQJ8 138 aa10.94□□□□□ -0.66
LIMS1-205ENST00000410093 HMGB3O15347 200 aaKnown RBP10.94□□□□□ -0.66
LIMS1-205ENST00000410093 OR5G3P0C626 314 aa10.94□□□□□ -0.66
LIMS1-205ENST00000410093 IGFBP2P18065 325 aa10.94□□□□□ -0.66
LIMS1-205ENST00000410093 CDSNQ15517 529 aa10.94□□□□□ -0.66
LIMS1-205ENST00000410093 PRSS8Q16651 343 aa10.94□□□□□ -0.66
LIMS1-205ENST00000410093 THAP8Q8NA92 274 aa10.94□□□□□ -0.66
LIMS1-205ENST00000410093 OR1L4Q8NGR5 311 aa10.94□□□□□ -0.66
LIMS1-205ENST00000410093 ABHD5Q8WTS1 349 aa10.94□□□□□ -0.66
LIMS1-205ENST00000410093 SSMEM1Q8WWF3 244 aa10.94□□□□□ -0.66
LIMS1-205ENST00000410093 TMEM190Q8WZ59 177 aa10.94□□□□□ -0.66
LIMS1-205ENST00000410093 RPUSD4Q96CM3 377 aaKnown RBP10.94□□□□□ -0.66
LIMS1-205ENST00000410093 OR5B12Q96R08 314 aa10.94□□□□□ -0.66
LIMS1-205ENST00000410093 IMMP2LQ96T52 175 aa10.94□□□□□ -0.66
LIMS1-205ENST00000410093 SPOCK3Q9BQ16 436 aa10.94□□□□□ -0.66
LIMS1-205ENST00000410093 TCEAL7Q9BRU2 100 aa10.94□□□□□ -0.66
LIMS1-205ENST00000410093 SAV1Q9H4B6 383 aaPredicted RBP10.94□□□□□ -0.66
LIMS1-205ENST00000410093 LY96Q9Y6Y9 160 aa10.94□□□□□ -0.66
LIMS1-205ENST00000410093 CRYBG3Q68DQ2 2970 aa10.94□□□□□ -0.66
LIMS1-205ENST00000410093 ENSAO43768 121 aaKnown RBP10.94□□□□□ -0.66
LIMS1-205ENST00000410093 SLC25A17O43808 307 aa10.94□□□□□ -0.66
LIMS1-205ENST00000410093 RPL27AP46776 148 aaKnown RBP10.94□□□□□ -0.66
LIMS1-205ENST00000410093 RPL23P62829 140 aaKnown RBP10.94□□□□□ -0.66
LIMS1-205ENST00000410093 ADIRFQ15847 76 aa10.94□□□□□ -0.66
LIMS1-205ENST00000410093 CST9LP1Q5W188 147 aa10.94□□□□□ -0.66
LIMS1-205ENST00000410093 OR1L6Q8NGR2 347 aa10.94□□□□□ -0.66
LIMS1-205ENST00000410093 SSBP3Q9BWW4 388 aaPredicted RBP10.94□□□□□ -0.66
LIMS1-205ENST00000410093 METTL1Q9UBP6 276 aaKnown RBP10.94□□□□□ -0.66
LIMS1-205ENST00000410093 SIGLEC9Q9Y336 463 aa10.94□□□□□ -0.66
LIMS1-205ENST00000410093 ROS1P08922 2347 aa10.93□□□□□ -0.66
LIMS1-205ENST00000410093 PKDREJQ9NTG1 2253 aa10.93□□□□□ -0.66
LIMS1-205ENST00000410093 LOC105371242A0A075B767 164 aa10.93□□□□□ -0.66
LIMS1-205ENST00000410093 C5orf52A6NGY3 159 aa10.93□□□□□ -0.66
LIMS1-205ENST00000410093 LYNX1G3V0Z9 82 aa10.93□□□□□ -0.66
LIMS1-205ENST00000410093 C19orf84I3L1E1 186 aa10.93□□□□□ -0.66
LIMS1-205ENST00000410093 S100A8P05109 93 aa10.93□□□□□ -0.66
LIMS1-205ENST00000410093 LYNX1P0DP58 116 aa10.93□□□□□ -0.66
LIMS1-205ENST00000410093 MYOD1P15172 320 aa10.93□□□□□ -0.66
LIMS1-205ENST00000410093 PRTN3P24158 256 aa10.93□□□□□ -0.66
LIMS1-205ENST00000410093 HTR1DP28221 377 aa10.93□□□□□ -0.66
LIMS1-205ENST00000410093 OR10J1P30954 320 aa10.93□□□□□ -0.66
LIMS1-205ENST00000410093 SRP14P37108 136 aaKnown RBP10.93□□□□□ -0.66
LIMS1-205ENST00000410093 BPIFB3P59826 476 aa10.93□□□□□ -0.66
LIMS1-205ENST00000410093 PSG5Q15238 335 aa10.93□□□□□ -0.66
LIMS1-205ENST00000410093 ZNF674Q2M3X9 581 aa10.93□□□□□ -0.66
LIMS1-205ENST00000410093 GCSAMLQ5JQS6 135 aa10.93□□□□□ -0.66
LIMS1-205ENST00000410093 FAM78BQ5VT40 261 aa10.93□□□□□ -0.66
LIMS1-205ENST00000410093 MOB3BQ86TA1 216 aa10.93□□□□□ -0.66
LIMS1-205ENST00000410093 OR10W1Q8NGF6 305 aa10.93□□□□□ -0.66
LIMS1-205ENST00000410093 Q8WTZ3 238 aa10.93□□□□□ -0.66
LIMS1-205ENST00000410093 C11orf52Q96A22 123 aa10.93□□□□□ -0.66
LIMS1-205ENST00000410093 DPM3Q9P2X0 92 aa10.93□□□□□ -0.66
LIMS1-205ENST00000410093 TNCP24821 2201 aa10.92□□□□□ -0.66
LIMS1-205ENST00000410093 H7BYZ3 331 aa10.92□□□□□ -0.66
LIMS1-205ENST00000410093 UBE2CO00762 179 aa10.92□□□□□ -0.66
LIMS1-205ENST00000410093 GPR6P46095 362 aaPredicted RBP10.92□□□□□ -0.66
LIMS1-205ENST00000410093 RPS10P46783 165 aaKnown RBP10.92□□□□□ -0.66
LIMS1-205ENST00000410093 WT1-ASQ06250 92 aa10.92□□□□□ -0.66
LIMS1-205ENST00000410093 DIAPH2-AS1Q14236 149 aa10.92□□□□□ -0.66
LIMS1-205ENST00000410093 TPTE2P1Q5T6R2 138 aa10.92□□□□□ -0.66
LIMS1-205ENST00000410093 CCDC144NLQ6NUI1 221 aa10.92□□□□□ -0.66
LIMS1-205ENST00000410093 PPP1R27Q86WC6 154 aa10.92□□□□□ -0.66
LIMS1-205ENST00000410093 STXBP6Q8NFX7 210 aa10.92□□□□□ -0.66
LIMS1-205ENST00000410093 OR1P1Q8NH06 330 aa10.92□□□□□ -0.66
LIMS1-205ENST00000410093 FAM210BQ96KR6 192 aa10.92□□□□□ -0.66
LIMS1-205ENST00000410093 PYGO2Q9BRQ0 406 aa10.92□□□□□ -0.66
LIMS1-205ENST00000410093 ONECUT1Q9UBC0 465 aa10.92□□□□□ -0.66
LIMS1-205ENST00000410093 CELSR2Q9HCU4 2923 aa10.92□□□□□ -0.66
LIMS1-205ENST00000410093 CENPEQ02224 2701 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms