RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 APOFQ13790 326 aa3.13□□□□□ -1.91
LSM5-206ENST00000409987 GRK1Q15835 563 aa3.13□□□□□ -1.91
LSM5-206ENST00000409987 TNFAIP8L3Q5GJ75 292 aa3.13□□□□□ -1.91
LSM5-206ENST00000409987 GLT8D1Q68CQ7 371 aa3.13□□□□□ -1.91
LSM5-206ENST00000409987 SCXQ7RTU7 201 aa3.13□□□□□ -1.91
LSM5-206ENST00000409987 TMEM35BQ8NCS4 154 aa3.13□□□□□ -1.91
LSM5-206ENST00000409987 UBALD1Q8TB05 177 aa3.13□□□□□ -1.91
LSM5-206ENST00000409987 ZNF721Q8TF20 911 aa3.13□□□□□ -1.91
LSM5-206ENST00000409987 NMNAT3Q96T66 252 aa3.13□□□□□ -1.91
LSM5-206ENST00000409987 VCXQ9H320 206 aa3.13□□□□□ -1.91
LSM5-206ENST00000409987 SS18L2Q9UHA2 77 aa3.13□□□□□ -1.91
LSM5-206ENST00000409987 PRNDQ9UKY0 176 aa3.13□□□□□ -1.91
LSM5-206ENST00000409987 TJP1Q07157 1748 aa3.13□□□□□ -1.91
LSM5-206ENST00000409987 LRP4O75096 1905 aa3.13□□□□□ -1.91
LSM5-206ENST00000409987 VPS37CA5D8V6 355 aaPredicted RBP3.12□□□□□ -1.91
LSM5-206ENST00000409987 A8MWP4 228 aa3.12□□□□□ -1.91
LSM5-206ENST00000409987 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.12□□□□□ -1.91
LSM5-206ENST00000409987 PIRO00625 290 aa3.12□□□□□ -1.91
LSM5-206ENST00000409987 HMGB3O15347 200 aaKnown RBP3.12□□□□□ -1.91
LSM5-206ENST00000409987 MFSD11O43934 449 aa3.12□□□□□ -1.91
LSM5-206ENST00000409987 IGKV1D-33P01593 117 aa3.12□□□□□ -1.91
LSM5-206ENST00000409987 IGKV1-33P01594 117 aa3.12□□□□□ -1.91
LSM5-206ENST00000409987 TRGV3P03979 118 aa3.12□□□□□ -1.91
LSM5-206ENST00000409987 HMGN1P05114 100 aa3.12□□□□□ -1.91
LSM5-206ENST00000409987 C8GP07360 202 aa3.12□□□□□ -1.91
LSM5-206ENST00000409987 ERP29P30040 261 aaKnown RBP3.12□□□□□ -1.91
LSM5-206ENST00000409987 ZNF816Q0VGE8 651 aaPredicted RBP3.12□□□□□ -1.91
LSM5-206ENST00000409987 CST6Q15828 149 aa3.12□□□□□ -1.91
LSM5-206ENST00000409987 IBA57Q5T440 356 aaKnown RBP3.12□□□□□ -1.91
LSM5-206ENST00000409987 GPHB5Q86YW7 130 aa3.12□□□□□ -1.91
LSM5-206ENST00000409987 SAXO1Q8IYX7 474 aa3.12□□□□□ -1.91
LSM5-206ENST00000409987 TMEM105Q8N8V8 129 aa3.12□□□□□ -1.91
LSM5-206ENST00000409987 ZNF439Q8NDP4 499 aa3.12□□□□□ -1.91
LSM5-206ENST00000409987 OR10J5Q8NHC4 309 aa3.12□□□□□ -1.91
LSM5-206ENST00000409987 GPER1Q99527 375 aa3.12□□□□□ -1.91
LSM5-206ENST00000409987 C1orf50Q9BV19 199 aa3.12□□□□□ -1.91
LSM5-206ENST00000409987 TMEM222Q9H0R3 208 aa3.12□□□□□ -1.91
LSM5-206ENST00000409987 SH3BGRL3Q9H299 93 aa3.12□□□□□ -1.91
LSM5-206ENST00000409987 TRAPPC1Q9Y5R8 145 aa3.12□□□□□ -1.91
LSM5-206ENST00000409987 TMEM56-RWDD3S4R434 201 aa3.12□□□□□ -1.91
LSM5-206ENST00000409987 OBSCNQ5VST9 7968 aa3.12□□□□□ -1.91
LSM5-206ENST00000409987 ROBO3Q96MS0 1386 aa3.12□□□□□ -1.91
LSM5-206ENST00000409987 CACNA1HO95180 2353 aa3.11□□□□□ -1.91
LSM5-206ENST00000409987 RIC1Q4ADV7 1423 aa3.11□□□□□ -1.91
LSM5-206ENST00000409987 hCG_1818297A0A087WSY0 165 aa3.11□□□□□ -1.91
LSM5-206ENST00000409987 A0A1W2PQ67 120 aa3.11□□□□□ -1.91
LSM5-206ENST00000409987 A6NED7 52 aa3.11□□□□□ -1.91
LSM5-206ENST00000409987 ZNF729A6NN14 1252 aaPredicted RBP3.11□□□□□ -1.91
LSM5-206ENST00000409987 A8MT66 165 aa3.11□□□□□ -1.91
LSM5-206ENST00000409987 G3V2T6 193 aa3.11□□□□□ -1.91
LSM5-206ENST00000409987 ZNF682O95780 498 aa3.11□□□□□ -1.91
LSM5-206ENST00000409987 SPI1P17947 270 aa3.11□□□□□ -1.91
LSM5-206ENST00000409987 PHBP35232 272 aa3.11□□□□□ -1.91
LSM5-206ENST00000409987 OR8G1Q15617 311 aa3.11□□□□□ -1.91
LSM5-206ENST00000409987 Q6ZS49 121 aa3.11□□□□□ -1.91
LSM5-206ENST00000409987 H1FOOQ8IZA3 346 aaPredicted RBP3.11□□□□□ -1.91
LSM5-206ENST00000409987 ZFAND2AQ8N6M9 145 aa3.11□□□□□ -1.91
LSM5-206ENST00000409987 OR13C8Q8NGS7 320 aa3.11□□□□□ -1.91
LSM5-206ENST00000409987 GPR146Q96CH1 333 aa3.11□□□□□ -1.91
LSM5-206ENST00000409987 ERMAPQ96PL5 475 aaPredicted RBP3.11□□□□□ -1.91
LSM5-206ENST00000409987 CCDC90BQ9GZT6 254 aa3.11□□□□□ -1.91
LSM5-206ENST00000409987 LYRM2Q9NU23 88 aaPredicted RBP3.11□□□□□ -1.91
LSM5-206ENST00000409987 LINC00588Q9Y4M8 146 aa3.11□□□□□ -1.91
LSM5-206ENST00000409987 RTL9Q8NET4 1388 aa3.11□□□□□ -1.91
LSM5-206ENST00000409987 LOC400499M0QZD8 3231 aa3.1□□□□□ -1.91
LSM5-206ENST00000409987 GCN1Q92616 2671 aaKnown RBP3.1□□□□□ -1.91
LSM5-206ENST00000409987 NAV2Q8IVL1 2488 aa3.1□□□□□ -1.91
LSM5-206ENST00000409987 A0A1B0GW54 56 aa3.1□□□□□ -1.91
LSM5-206ENST00000409987 A0A1W2PNU3 283 aaPredicted RBP3.1□□□□□ -1.91
LSM5-206ENST00000409987 C9JCJ5 164 aa3.1□□□□□ -1.91
LSM5-206ENST00000409987 SH2D1AO60880 128 aa3.1□□□□□ -1.91
LSM5-206ENST00000409987 CPMP14384 443 aa3.1□□□□□ -1.91
LSM5-206ENST00000409987 TBPL1P62380 186 aa3.1□□□□□ -1.91
LSM5-206ENST00000409987 FKBP1AP62942 108 aaKnown RBP3.1□□□□□ -1.91
LSM5-206ENST00000409987 GNG5P63218 68 aa3.1□□□□□ -1.91
LSM5-206ENST00000409987 EIF4EBP2Q13542 120 aaPredicted RBP3.1□□□□□ -1.91
LSM5-206ENST00000409987 EBI3Q14213 229 aa3.1□□□□□ -1.91
LSM5-206ENST00000409987 C10orf91Q5T1B1 145 aa3.1□□□□□ -1.91
LSM5-206ENST00000409987 ADM2Q7Z4H4 148 aa3.1□□□□□ -1.91
LSM5-206ENST00000409987 C12orf45Q8N5I9 185 aaPredicted RBP3.1□□□□□ -1.91
LSM5-206ENST00000409987 ZNF283Q8N7M2 679 aa3.1□□□□□ -1.91
LSM5-206ENST00000409987 OR13D1Q8NGV5 346 aa3.1□□□□□ -1.91
LSM5-206ENST00000409987 OR4K13Q8NH42 304 aa3.1□□□□□ -1.91
LSM5-206ENST00000409987 GPR119Q8TDV5 335 aa3.1□□□□□ -1.91
LSM5-206ENST00000409987 LMX1AQ8TE12 382 aa3.1□□□□□ -1.91
LSM5-206ENST00000409987 HIST1H2BAQ96A08 127 aa3.1□□□□□ -1.91
LSM5-206ENST00000409987 FOPNLQ96NB1 174 aa3.1□□□□□ -1.91
LSM5-206ENST00000409987 C20orf27Q9GZN8 174 aa3.1□□□□□ -1.91
LSM5-206ENST00000409987 WDR61Q9GZS3 305 aaKnown RBP3.1□□□□□ -1.91
LSM5-206ENST00000409987 C6orf62Q9GZU0 229 aaPredicted RBP3.1□□□□□ -1.91
LSM5-206ENST00000409987 FBXL12Q9NXK8 326 aa3.1□□□□□ -1.91
LSM5-206ENST00000409987 SLC23A2Q9UGH3 650 aa3.1□□□□□ -1.91
LSM5-206ENST00000409987 ICOSQ9Y6W8 199 aa3.1□□□□□ -1.91
LSM5-206ENST00000409987 WDFY3Q8IZQ1 3526 aa3.1□□□□□ -1.91
LSM5-206ENST00000409987 LAMA5O15230 3695 aa3.1□□□□□ -1.91
LSM5-206ENST00000409987 FAM208BQ5VWN6 2430 aa3.1□□□□□ -1.91
LSM5-206ENST00000409987 GVINP1Q7Z2Y8 2422 aa3.1□□□□□ -1.91
LSM5-206ENST00000409987 NBEAQ8NFP9 2946 aa3.09□□□□□ -1.91
LSM5-206ENST00000409987 USP24Q9UPU5 2620 aa3.09□□□□□ -1.91
LSM5-206ENST00000409987 TRBV20OR9-2A0A075B6H5 130 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms