RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 PSG5Q15238 335 aa16.17■□□□□ 0.18
USP39-204ENST00000409766 MMD2Q8IY49 270 aa16.17■□□□□ 0.18
USP39-204ENST00000409766 OR2T6Q8NHC8 308 aa16.17■□□□□ 0.18
USP39-204ENST00000409766 FNDC4Q9H6D8 234 aaPredicted RBP16.17■□□□□ 0.18
USP39-204ENST00000409766 TGIF2-C20orf24A0A0A6YYL0 155 aa16.16■□□□□ 0.18
USP39-204ENST00000409766 FOXH1O75593 365 aa16.16■□□□□ 0.18
USP39-204ENST00000409766 GATA2P23769 480 aaPredicted RBP16.16■□□□□ 0.18
USP39-204ENST00000409766 FAM78BQ5VT40 261 aa16.16■□□□□ 0.18
USP39-204ENST00000409766 SSBP3Q9BWW4 388 aaPredicted RBP16.16■□□□□ 0.18
USP39-204ENST00000409766 PRELID1Q9Y255 219 aa16.16■□□□□ 0.18
USP39-204ENST00000409766 SIGLEC9Q9Y336 463 aa16.16■□□□□ 0.18
USP39-204ENST00000409766 IGLC7A0M8Q6 106 aa16.16■□□□□ 0.18
USP39-204ENST00000409766 GNLYP22749 145 aa16.16■□□□□ 0.18
USP39-204ENST00000409766 ARF6P62330 175 aa16.16■□□□□ 0.18
USP39-204ENST00000409766 LDLRAD2Q5SZI1 272 aa16.16■□□□□ 0.18
USP39-204ENST00000409766 MIR17HGQ75NE6 70 aa16.16■□□□□ 0.18
USP39-204ENST00000409766 SSX3Q99909 188 aa16.16■□□□□ 0.18
USP39-204ENST00000409766 FUT9Q9Y231 359 aa16.16■□□□□ 0.18
USP39-204ENST00000409766 F6UZH7 168 aa16.15■□□□□ 0.18
USP39-204ENST00000409766 RPS10P46783 165 aaKnown RBP16.15■□□□□ 0.18
USP39-204ENST00000409766 OR11H6Q8NGC7 330 aa16.15■□□□□ 0.18
USP39-204ENST00000409766 ACY3Q96HD9 319 aa16.15■□□□□ 0.18
USP39-204ENST00000409766 LOC105371242A0A075B767 164 aa16.14■□□□□ 0.17
USP39-204ENST00000409766 CLN5O75503 358 aa16.14■□□□□ 0.17
USP39-204ENST00000409766 ACTL6BO94805 426 aa16.14■□□□□ 0.17
USP39-204ENST00000409766 VENTXO95231 258 aa16.14■□□□□ 0.17
USP39-204ENST00000409766 KIAA0141Q14154 515 aaPredicted RBP16.14■□□□□ 0.17
USP39-204ENST00000409766 C19orf24Q9BVV8 132 aa16.14■□□□□ 0.17
USP39-204ENST00000409766 YTHDF2Q9Y5A9 579 aaKnown RBP16.14■□□□□ 0.17
USP39-204ENST00000409766 M0R1W7 72 aa16.14■□□□□ 0.17
USP39-204ENST00000409766 NDUFB4O95168 129 aa16.14■□□□□ 0.17
USP39-204ENST00000409766 MT-CO2P00403 227 aa16.14■□□□□ 0.17
USP39-204ENST00000409766 REG1AP05451 166 aa16.14■□□□□ 0.17
USP39-204ENST00000409766 TNXAQ16473 311 aa16.14■□□□□ 0.17
USP39-204ENST00000409766 PVRIGQ6DKI7 326 aa16.14■□□□□ 0.17
USP39-204ENST00000409766 C5orf52A6NGY3 159 aa16.13■□□□□ 0.17
USP39-204ENST00000409766 CDKN1AP38936 164 aa16.13■□□□□ 0.17
USP39-204ENST00000409766 RPL27AP46776 148 aaKnown RBP16.13■□□□□ 0.17
USP39-204ENST00000409766 COMPP49747 757 aaPredicted RBP16.13■□□□□ 0.17
USP39-204ENST00000409766 SNRPEP62304 92 aaKnown RBP16.13■□□□□ 0.17
USP39-204ENST00000409766 PPP1R27Q86WC6 154 aa16.13■□□□□ 0.17
USP39-204ENST00000409766 DOK5Q9P104 306 aa16.13■□□□□ 0.17
USP39-204ENST00000409766 METTL1Q9UBP6 276 aaKnown RBP16.13■□□□□ 0.17
USP39-204ENST00000409766 OR5G3P0C626 314 aa16.12■□□□□ 0.17
USP39-204ENST00000409766 TPTE2P1Q5T6R2 138 aa16.12■□□□□ 0.17
USP39-204ENST00000409766 MRPL41Q8IXM3 137 aaKnown RBP16.12■□□□□ 0.17
USP39-204ENST00000409766 ZNF114Q8NC26 417 aa16.12■□□□□ 0.17
USP39-204ENST00000409766 RNF5Q99942 180 aa16.12■□□□□ 0.17
USP39-204ENST00000409766 DERL1Q9BUN8 251 aa16.12■□□□□ 0.17
USP39-204ENST00000409766 HTR1DP28221 377 aa16.12■□□□□ 0.17
USP39-204ENST00000409766 SSBP2P81877 361 aaPredicted RBP16.12■□□□□ 0.17
USP39-204ENST00000409766 C16orf82Q7Z2V1 217 aa16.12■□□□□ 0.17
USP39-204ENST00000409766 TMEM37Q8WXS4 190 aa16.12■□□□□ 0.17
USP39-204ENST00000409766 NPIPB3Q92617 1050 aa16.12■□□□□ 0.17
USP39-204ENST00000409766 PSMB11A5LHX3 300 aa16.11■□□□□ 0.17
USP39-204ENST00000409766 A6NNC1 897 aa16.11■□□□□ 0.17
USP39-204ENST00000409766 C19orf84I3L1E1 186 aa16.11■□□□□ 0.17
USP39-204ENST00000409766 NDUFS7O75251 213 aa16.11■□□□□ 0.17
USP39-204ENST00000409766 S100A6P06703 90 aa16.11■□□□□ 0.17
USP39-204ENST00000409766 AREGP15514 252 aa16.11■□□□□ 0.17
USP39-204ENST00000409766 PRTN3P24158 256 aa16.11■□□□□ 0.17
USP39-204ENST00000409766 HCP5Q6MZN7 132 aa16.11■□□□□ 0.17
USP39-204ENST00000409766 UBTD1Q9HAC8 227 aa16.11■□□□□ 0.17
USP39-204ENST00000409766 TECRQ9NZ01 308 aaKnown RBP16.11■□□□□ 0.17
USP39-204ENST00000409766 MRPL36Q9P0J6 103 aaKnown RBP16.11■□□□□ 0.17
USP39-204ENST00000409766 DPM3Q9P2X0 92 aa16.11■□□□□ 0.17
USP39-204ENST00000409766 TIMM23O14925 209 aa16.11■□□□□ 0.17
USP39-204ENST00000409766 IGHV3-48P01763 117 aa16.11■□□□□ 0.17
USP39-204ENST00000409766 GPR6P46095 362 aaPredicted RBP16.11■□□□□ 0.17
USP39-204ENST00000409766 MFAP2P55001 183 aa16.11■□□□□ 0.17
USP39-204ENST00000409766 THAP8Q8NA92 274 aa16.11■□□□□ 0.17
USP39-204ENST00000409766 ZNF503Q96F45 646 aa16.11■□□□□ 0.17
USP39-204ENST00000409766 FBXL15Q9H469 300 aa16.11■□□□□ 0.17
USP39-204ENST00000409766 ACACBO00763 2458 aa16.1■□□□□ 0.17
USP39-204ENST00000409766 TRBV24-1A0A075B6N3 115 aa16.1■□□□□ 0.17
USP39-204ENST00000409766 IGKV1D-37A0A075B6S9 117 aa16.1■□□□□ 0.17
USP39-204ENST00000409766 LINC01551Q86U37 167 aa16.1■□□□□ 0.17
USP39-204ENST00000409766 FAM210BQ96KR6 192 aa16.1■□□□□ 0.17
USP39-204ENST00000409766 SCO2A0A1W2PP80 73 aa16.09■□□□□ 0.17
USP39-204ENST00000409766 ODF3BA8MYP8 253 aa16.09■□□□□ 0.17
USP39-204ENST00000409766 IGHV2-5P01817 119 aa16.09■□□□□ 0.17
USP39-204ENST00000409766 CRYGCP07315 174 aa16.09■□□□□ 0.17
USP39-204ENST00000409766 KLRD1Q13241 179 aa16.09■□□□□ 0.17
USP39-204ENST00000409766 PQLC2Q6ZP29 291 aa16.09■□□□□ 0.17
USP39-204ENST00000409766 SLC25A33Q9BSK2 321 aa16.09■□□□□ 0.17
USP39-204ENST00000409766 TMEM167BQ9NRX6 74 aa16.09■□□□□ 0.17
USP39-204ENST00000409766 ARL2-SNX15V9GYD0 113 aa16.09■□□□□ 0.17
USP39-204ENST00000409766 TCRBV4S1A1TA0A5B7 111 aa16.09■□□□□ 0.17
USP39-204ENST00000409766 TEX22C9J3V5 150 aa16.09■□□□□ 0.17
USP39-204ENST00000409766 PFN1P07737 140 aaKnown RBP16.09■□□□□ 0.17
USP39-204ENST00000409766 RPL35P42766 123 aaKnown RBP16.09■□□□□ 0.17
USP39-204ENST00000409766 AKR1D1P51857 326 aa16.09■□□□□ 0.17
USP39-204ENST00000409766 C1orf122Q6ZSJ8 110 aa16.09■□□□□ 0.17
USP39-204ENST00000409766 LINC00518Q8N0U6 118 aa16.09■□□□□ 0.17
USP39-204ENST00000409766 ANAPC16Q96DE5 110 aa16.09■□□□□ 0.17
USP39-204ENST00000409766 TRBV20OR9-2A0A075B6H5 130 aa16.08■□□□□ 0.16
USP39-204ENST00000409766 H7BYZ3 331 aa16.08■□□□□ 0.16
USP39-204ENST00000409766 FCN1O00602 326 aa16.08■□□□□ 0.16
USP39-204ENST00000409766 UBE2CO00762 179 aa16.08■□□□□ 0.16
USP39-204ENST00000409766 APELAP0DMC3 54 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms