RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 SSX2Q16385 188 aa11.26□□□□□ -0.61
LIMS2-206ENST00000409754 LCN15Q6UWW0 184 aa11.26□□□□□ -0.61
LIMS2-206ENST00000409754 SSX7Q7RTT5 188 aa11.26□□□□□ -0.61
LIMS2-206ENST00000409754 RNASEH2CQ8TDP1 164 aaKnown RBP11.26□□□□□ -0.61
LIMS2-206ENST00000409754 CACNG8Q8WXS5 425 aa11.26□□□□□ -0.61
LIMS2-206ENST00000409754 ACTR3CQ9C0K3 210 aaPredicted RBP11.26□□□□□ -0.61
LIMS2-206ENST00000409754 FBXL15Q9H469 300 aa11.26□□□□□ -0.61
LIMS2-206ENST00000409754 LPAR2Q9HBW0 351 aa11.26□□□□□ -0.61
LIMS2-206ENST00000409754 SLC39A9Q9NUM3 307 aa11.26□□□□□ -0.61
LIMS2-206ENST00000409754 SVEP1Q4LDE5 3571 aa11.26□□□□□ -0.61
LIMS2-206ENST00000409754 IGLC7A0M8Q6 106 aa11.25□□□□□ -0.61
LIMS2-206ENST00000409754 MAP1LC3B2A6NCE7 125 aa11.25□□□□□ -0.61
LIMS2-206ENST00000409754 NBR2O15453 112 aa11.25□□□□□ -0.61
LIMS2-206ENST00000409754 NDUFA3O95167 84 aa11.25□□□□□ -0.61
LIMS2-206ENST00000409754 DEFA5Q01523 94 aa11.25□□□□□ -0.61
LIMS2-206ENST00000409754 PAX8Q06710 450 aa11.25□□□□□ -0.61
LIMS2-206ENST00000409754 MMDQ15546 238 aa11.25□□□□□ -0.61
LIMS2-206ENST00000409754 ZNF506Q5JVG8 444 aa11.25□□□□□ -0.61
LIMS2-206ENST00000409754 TMEM144Q7Z5S9 345 aa11.25□□□□□ -0.61
LIMS2-206ENST00000409754 SVBPQ8N300 66 aa11.25□□□□□ -0.61
LIMS2-206ENST00000409754 ZNF114Q8NC26 417 aa11.25□□□□□ -0.61
LIMS2-206ENST00000409754 MAPK1IP1LQ8NDC0 245 aa11.25□□□□□ -0.61
LIMS2-206ENST00000409754 OR2T10Q8NGZ9 312 aa11.25□□□□□ -0.61
LIMS2-206ENST00000409754 MALSU1Q96EH3 234 aa11.25□□□□□ -0.61
LIMS2-206ENST00000409754 EAF1Q96JC9 268 aaPredicted RBP11.25□□□□□ -0.61
LIMS2-206ENST00000409754 P2RX4Q99571 388 aa11.25□□□□□ -0.61
LIMS2-206ENST00000409754 MAP1LC3BQ9GZQ8 125 aa11.25□□□□□ -0.61
LIMS2-206ENST00000409754 NSD1Q96L73 2696 aaPredicted RBP11.25□□□□□ -0.61
LIMS2-206ENST00000409754 CYB5BO43169 146 aa11.24□□□□□ -0.61
LIMS2-206ENST00000409754 SNRNP70P08621 437 aaKnown RBP11.24□□□□□ -0.61
LIMS2-206ENST00000409754 PPT1P50897 306 aa11.24□□□□□ -0.61
LIMS2-206ENST00000409754 KRTAP1-1Q07627 177 aa11.24□□□□□ -0.61
LIMS2-206ENST00000409754 PMS2P11Q13670 270 aa11.24□□□□□ -0.61
LIMS2-206ENST00000409754 EBI3Q14213 229 aa11.24□□□□□ -0.61
LIMS2-206ENST00000409754 PLGLAQ15195 96 aa11.24□□□□□ -0.61
LIMS2-206ENST00000409754 PVRIGQ6DKI7 326 aa11.24□□□□□ -0.61
LIMS2-206ENST00000409754 DYNAPQ8N1N2 210 aa11.24□□□□□ -0.61
LIMS2-206ENST00000409754 SRSF8Q9BRL6 282 aaKnown RBP11.24□□□□□ -0.61
LIMS2-206ENST00000409754 PXMP4Q9Y6I8 212 aa11.24□□□□□ -0.61
LIMS2-206ENST00000409754 SEC14L6B5MCN3 397 aa11.24□□□□□ -0.61
LIMS2-206ENST00000409754 RNF223E7ERA6 249 aa11.24□□□□□ -0.61
LIMS2-206ENST00000409754 RPL29P47914 159 aaKnown RBP11.24□□□□□ -0.61
LIMS2-206ENST00000409754 GNB1P62873 340 aa11.24□□□□□ -0.61
LIMS2-206ENST00000409754 GAMTQ14353 236 aa11.24□□□□□ -0.61
LIMS2-206ENST00000409754 MIC13Q5XKP0 118 aa11.24□□□□□ -0.61
LIMS2-206ENST00000409754 FAM122CQ6P4D5 195 aa11.24□□□□□ -0.61
LIMS2-206ENST00000409754 SLC16A13Q7RTY0 426 aa11.24□□□□□ -0.61
LIMS2-206ENST00000409754 Q8N6K4 173 aa11.24□□□□□ -0.61
LIMS2-206ENST00000409754 C17orf50Q8WW18 174 aa11.24□□□□□ -0.61
LIMS2-206ENST00000409754 RARRES2Q99969 163 aa11.24□□□□□ -0.61
LIMS2-206ENST00000409754 TMUB1Q9BVT8 246 aa11.24□□□□□ -0.61
LIMS2-206ENST00000409754 SLC35B3Q9H1N7 401 aa11.24□□□□□ -0.61
LIMS2-206ENST00000409754 LOC102723971A0A1B0GUV8 181 aa11.23□□□□□ -0.61
LIMS2-206ENST00000409754 TEX22C9J3V5 150 aa11.23□□□□□ -0.61
LIMS2-206ENST00000409754 YIF1AO95070 293 aa11.23□□□□□ -0.61
LIMS2-206ENST00000409754 CDC34P49427 236 aaPredicted RBP11.23□□□□□ -0.61
LIMS2-206ENST00000409754 FGF8P55075 233 aaPredicted RBP11.23□□□□□ -0.61
LIMS2-206ENST00000409754 SSBP2P81877 361 aaPredicted RBP11.23□□□□□ -0.61
LIMS2-206ENST00000409754 HES1Q14469 280 aa11.23□□□□□ -0.61
LIMS2-206ENST00000409754 GUCA2BQ16661 112 aa11.23□□□□□ -0.61
LIMS2-206ENST00000409754 HAGHQ16775 308 aa11.23□□□□□ -0.61
LIMS2-206ENST00000409754 KHDC3LQ587J8 217 aa11.23□□□□□ -0.61
LIMS2-206ENST00000409754 SRSF12Q8WXF0 261 aaKnown RBP11.23□□□□□ -0.61
LIMS2-206ENST00000409754 RAB24Q969Q5 203 aa11.23□□□□□ -0.61
LIMS2-206ENST00000409754 AJUBAQ96IF1 538 aa11.23□□□□□ -0.61
LIMS2-206ENST00000409754 SLC35E1Q96K37 410 aa11.23□□□□□ -0.61
LIMS2-206ENST00000409754 SLC25A22Q9H936 323 aa11.23□□□□□ -0.61
LIMS2-206ENST00000409754 ABCA1O95477 2261 aa11.22□□□□□ -0.61
LIMS2-206ENST00000409754 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.22□□□□□ -0.61
LIMS2-206ENST00000409754 FCN1O00602 326 aa11.22□□□□□ -0.61
LIMS2-206ENST00000409754 IFNA1P01562 189 aa11.22□□□□□ -0.61
LIMS2-206ENST00000409754 HSPB1P04792 205 aaKnown RBP11.22□□□□□ -0.61
LIMS2-206ENST00000409754 PAX6P26367 422 aa11.22□□□□□ -0.61
LIMS2-206ENST00000409754 B2MP61769 119 aa11.22□□□□□ -0.61
LIMS2-206ENST00000409754 PRR20EP86478 221 aa11.22□□□□□ -0.61
LIMS2-206ENST00000409754 PRR20CP86479 221 aa11.22□□□□□ -0.61
LIMS2-206ENST00000409754 PRR20DP86480 221 aa11.22□□□□□ -0.61
LIMS2-206ENST00000409754 PRR20BP86481 221 aa11.22□□□□□ -0.61
LIMS2-206ENST00000409754 PRR20AP86496 221 aa11.22□□□□□ -0.61
LIMS2-206ENST00000409754 ICAM4Q14773 271 aa11.22□□□□□ -0.61
LIMS2-206ENST00000409754 C5orf64Q2M2E5 130 aa11.22□□□□□ -0.61
LIMS2-206ENST00000409754 ATRAIDQ6UW56 229 aa11.22□□□□□ -0.61
LIMS2-206ENST00000409754 STPG3Q8N7X2 389 aa11.22□□□□□ -0.61
LIMS2-206ENST00000409754 OR1P1Q8NH06 330 aa11.22□□□□□ -0.61
LIMS2-206ENST00000409754 GNG13Q9P2W3 67 aa11.22□□□□□ -0.61
LIMS2-206ENST00000409754 SLC45A2Q9UMX9 530 aa11.22□□□□□ -0.61
LIMS2-206ENST00000409754 NPFFO15130 113 aa11.21□□□□□ -0.61
LIMS2-206ENST00000409754 SNAPINO95295 136 aa11.21□□□□□ -0.61
LIMS2-206ENST00000409754 REG1AP05451 166 aa11.21□□□□□ -0.61
LIMS2-206ENST00000409754 BCL2P10415 239 aa11.21□□□□□ -0.61
LIMS2-206ENST00000409754 AREGP15514 252 aa11.21□□□□□ -0.61
LIMS2-206ENST00000409754 SLC25A16P16260 332 aa11.21□□□□□ -0.61
LIMS2-206ENST00000409754 CD24P25063 80 aa11.21□□□□□ -0.61
LIMS2-206ENST00000409754 SAA4P35542 130 aa11.21□□□□□ -0.61
LIMS2-206ENST00000409754 MLANAQ16655 118 aa11.21□□□□□ -0.61
LIMS2-206ENST00000409754 TMEM249Q2WGJ8 235 aa11.21□□□□□ -0.61
LIMS2-206ENST00000409754 ETFRF1Q6IPR1 90 aa11.21□□□□□ -0.61
LIMS2-206ENST00000409754 SSMEM1Q8WWF3 244 aa11.21□□□□□ -0.61
LIMS2-206ENST00000409754 SMR3AQ99954 134 aa11.21□□□□□ -0.61
LIMS2-206ENST00000409754 NKX6-2Q9C056 277 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms