RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 TRAV1-1A0A0B4J248 108 aa0.18□□□□□ -2.38
PMS1-203ENST00000409593 A0A1W2PPM0 123 aa0.18□□□□□ -2.38
PMS1-203ENST00000409593 ACOX3O15254 700 aa0.18□□□□□ -2.38
PMS1-203ENST00000409593 IGKV1-5P01602 117 aa0.18□□□□□ -2.38
PMS1-203ENST00000409593 MARCKSL1P49006 195 aa0.18□□□□□ -2.38
PMS1-203ENST00000409593 NAA20P61599 178 aa0.18□□□□□ -2.38
PMS1-203ENST00000409593 CLVS2Q5SYC1 327 aa0.18□□□□□ -2.38
PMS1-203ENST00000409593 IQCF2Q8IXL9 164 aa0.18□□□□□ -2.38
PMS1-203ENST00000409593 PFN4Q8NHR9 129 aa0.18□□□□□ -2.38
PMS1-203ENST00000409593 PATE1Q8WXA2 126 aa0.18□□□□□ -2.38
PMS1-203ENST00000409593 OPTNQ96CV9 577 aa0.18□□□□□ -2.38
PMS1-203ENST00000409593 SMR3AQ99954 134 aa0.18□□□□□ -2.38
PMS1-203ENST00000409593 LLPHQ9BRT6 129 aaKnown RBP0.18□□□□□ -2.38
PMS1-203ENST00000409593 TMEM70Q9BUB7 260 aa0.18□□□□□ -2.38
PMS1-203ENST00000409593 ULBP3Q9BZM4 244 aa0.18□□□□□ -2.38
PMS1-203ENST00000409593 C10orf95Q9H7T3 257 aa0.18□□□□□ -2.38
PMS1-203ENST00000409593 C3orf18Q9UK00 162 aa0.18□□□□□ -2.38
PMS1-203ENST00000409593 DCCP43146 1447 aa0.18□□□□□ -2.38
PMS1-203ENST00000409593 CEP192Q8TEP8 1941 aa0.18□□□□□ -2.38
PMS1-203ENST00000409593 A0A0D9SG52 128 aa0.18□□□□□ -2.38
PMS1-203ENST00000409593 H0Y980 276 aa0.18□□□□□ -2.38
PMS1-203ENST00000409593 ZNF25P17030 456 aaPredicted RBP0.18□□□□□ -2.38
PMS1-203ENST00000409593 RPS12P25398 132 aaKnown RBP0.18□□□□□ -2.38
PMS1-203ENST00000409593 MAGEA2P43356 314 aa0.18□□□□□ -2.38
PMS1-203ENST00000409593 TMED1Q13445 227 aa0.18□□□□□ -2.38
PMS1-203ENST00000409593 MED21Q13503 144 aa0.18□□□□□ -2.38
PMS1-203ENST00000409593 LRRN1Q6UXK5 716 aa0.18□□□□□ -2.38
PMS1-203ENST00000409593 RAB8BQ92930 207 aa0.18□□□□□ -2.38
PMS1-203ENST00000409593 CMTM6Q9NX76 183 aa0.18□□□□□ -2.38
PMS1-203ENST00000409593 SCN3AQ9NY46 2000 aa0.17□□□□□ -2.38
PMS1-203ENST00000409593 M0QZ92 97 aa0.17□□□□□ -2.38
PMS1-203ENST00000409593 INE1O15225 51 aa0.17□□□□□ -2.38
PMS1-203ENST00000409593 SSR2P43308 183 aa0.17□□□□□ -2.38
PMS1-203ENST00000409593 RAB5BP61020 215 aa0.17□□□□□ -2.38
PMS1-203ENST00000409593 PDPK2PQ6A1A2 396 aa0.17□□□□□ -2.38
PMS1-203ENST00000409593 CLVS1Q8IUQ0 354 aaPredicted RBP0.17□□□□□ -2.38
PMS1-203ENST00000409593 TMEM86BQ8N661 226 aa0.17□□□□□ -2.38
PMS1-203ENST00000409593 OR51D1Q8NGF3 324 aa0.17□□□□□ -2.38
PMS1-203ENST00000409593 WDR61Q9GZS3 305 aaKnown RBP0.17□□□□□ -2.38
PMS1-203ENST00000409593 HECW1Q76N89 1606 aa0.17□□□□□ -2.38
PMS1-203ENST00000409593 DENND4CQ5VZ89 1909 aa0.16□□□□□ -2.38
PMS1-203ENST00000409593 EVC2Q86UK5 1308 aa0.16□□□□□ -2.38
PMS1-203ENST00000409593 ADGRB2O60241 1585 aa0.16□□□□□ -2.38
PMS1-203ENST00000409593 HECW2Q9P2P5 1572 aa0.16□□□□□ -2.38
PMS1-203ENST00000409593 UBL3O95164 117 aa0.16□□□□□ -2.38
PMS1-203ENST00000409593 HIST1H2BOP23527 126 aa0.16□□□□□ -2.38
PMS1-203ENST00000409593 HIST1H2BBP33778 126 aa0.16□□□□□ -2.38
PMS1-203ENST00000409593 HIST1H2BDP58876 126 aa0.16□□□□□ -2.38
PMS1-203ENST00000409593 HIST1H2BCP62807 126 aa0.16□□□□□ -2.38
PMS1-203ENST00000409593 HIST2H2BEQ16778 126 aa0.16□□□□□ -2.38
PMS1-203ENST00000409593 RNASE10Q5GAN6 216 aaKnown RBP0.16□□□□□ -2.38
PMS1-203ENST00000409593 SPANXN3Q5MJ09 141 aa0.16□□□□□ -2.38
PMS1-203ENST00000409593 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.16□□□□□ -2.38
PMS1-203ENST00000409593 RPL22L1Q6P5R6 122 aaKnown RBP0.16□□□□□ -2.38
PMS1-203ENST00000409593 CD200R1LQ6Q8B3 271 aa0.16□□□□□ -2.38
PMS1-203ENST00000409593 FAM151BQ6UXP7 276 aa0.16□□□□□ -2.38
PMS1-203ENST00000409593 Q6ZS49 121 aa0.16□□□□□ -2.38
PMS1-203ENST00000409593 OR5A1Q8NGJ0 315 aa0.16□□□□□ -2.38
PMS1-203ENST00000409593 PIGXQ8TBF5 258 aa0.16□□□□□ -2.38
PMS1-203ENST00000409593 MRPL30Q8TCC3 161 aaKnown RBP0.16□□□□□ -2.38
PMS1-203ENST00000409593 SFT2D1Q8WV19 159 aa0.16□□□□□ -2.38
PMS1-203ENST00000409593 HIST1H2BHQ93079 126 aa0.16□□□□□ -2.38
PMS1-203ENST00000409593 HIST1H2BNQ99877 126 aa0.16□□□□□ -2.38
PMS1-203ENST00000409593 HIST1H2BMQ99879 126 aa0.16□□□□□ -2.38
PMS1-203ENST00000409593 CDC42SE1Q9NRR8 79 aa0.16□□□□□ -2.38
PMS1-203ENST00000409593 TOPBP1Q92547 1522 aa0.16□□□□□ -2.38
PMS1-203ENST00000409593 MIFP14174 115 aa0.15□□□□□ -2.39
PMS1-203ENST00000409593 UCHL3P15374 230 aa0.15□□□□□ -2.39
PMS1-203ENST00000409593 MYL12AP19105 171 aa0.15□□□□□ -2.39
PMS1-203ENST00000409593 RHOGP84095 191 aa0.15□□□□□ -2.39
PMS1-203ENST00000409593 PMAIP1Q13794 54 aa0.15□□□□□ -2.39
PMS1-203ENST00000409593 KHDC3LQ587J8 217 aa0.15□□□□□ -2.39
PMS1-203ENST00000409593 FAM9CQ8IZT9 166 aa0.15□□□□□ -2.39
PMS1-203ENST00000409593 TERB2Q8NHR7 220 aa0.15□□□□□ -2.39
PMS1-203ENST00000409593 DNAJC9Q8WXX5 260 aa0.15□□□□□ -2.39
PMS1-203ENST00000409593 TAS2R4Q9NYW5 299 aa0.15□□□□□ -2.39
PMS1-203ENST00000409593 ASH1LQ9NR48 2969 aaKnown RBP0.15□□□□□ -2.39
PMS1-203ENST00000409593 COL1A1P02452 1464 aaPredicted RBP0.14□□□□□ -2.39
PMS1-203ENST00000409593 A0A0A6YYH2 397 aa0.14□□□□□ -2.39
PMS1-203ENST00000409593 A6NJ64 397 aa0.14□□□□□ -2.39
PMS1-203ENST00000409593 EEF1E1-BLOC1S5C9J1V9 151 aa0.14□□□□□ -2.39
PMS1-203ENST00000409593 BUB1B-PAK6H3BSN5 160 aa0.14□□□□□ -2.39
PMS1-203ENST00000409593 RHEBQ15382 184 aa0.14□□□□□ -2.39
PMS1-203ENST00000409593 LPCAT4Q643R3 524 aa0.14□□□□□ -2.39
PMS1-203ENST00000409593 TEX261Q6UWH6 196 aa0.14□□□□□ -2.39
PMS1-203ENST00000409593 OR52R1Q8NGF1 315 aa0.14□□□□□ -2.39
PMS1-203ENST00000409593 SLC35B4Q969S0 331 aa0.14□□□□□ -2.39
PMS1-203ENST00000409593 CFAP53Q96M91 514 aa0.14□□□□□ -2.39
PMS1-203ENST00000409593 ATP6V1DQ9Y5K8 247 aa0.14□□□□□ -2.39
PMS1-203ENST00000409593 U3KQ87 197 aa0.14□□□□□ -2.39
PMS1-203ENST00000409593 MAST4O15021 2626 aa0.14□□□□□ -2.39
PMS1-203ENST00000409593 MTUS2Q5JR59 1369 aa0.14□□□□□ -2.39
PMS1-203ENST00000409593 ASCC3Q8N3C0 2202 aaKnown RBP0.14□□□□□ -2.39
PMS1-203ENST00000409593 MCM3APO60318 1980 aa0.14□□□□□ -2.39
PMS1-203ENST00000409593 TGIF2-C20orf24A0A0A6YYL0 155 aa0.14□□□□□ -2.39
PMS1-203ENST00000409593 LRRN3E7EW58 273 aa0.14□□□□□ -2.39
PMS1-203ENST00000409593 KCNK1O00180 336 aa0.14□□□□□ -2.39
PMS1-203ENST00000409593 SULT1B1O43704 296 aa0.14□□□□□ -2.39
PMS1-203ENST00000409593 LYZL6O75951 148 aa0.14□□□□□ -2.39
PMS1-203ENST00000409593 DEXIO95424 95 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms