RNA–Protein interactions for RNA: ENST00000409080.5

ITGA6-202, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 5,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-202ENST00000409080 PRTN3P24158 256 aa11.72□□□□□ -0.53
ITGA6-202ENST00000409080 TNFRSF18Q9Y5U5 241 aa11.72□□□□□ -0.53
ITGA6-202ENST00000409080 C2orf83Q53S99 150 aa11.72□□□□□ -0.53
ITGA6-202ENST00000409080 RNF125Q96EQ8 232 aa11.72□□□□□ -0.53
ITGA6-202ENST00000409080 USMG5Q96IX5 58 aa11.72□□□□□ -0.53
ITGA6-202ENST00000409080 TSC2P49815 1807 aa11.72□□□□□ -0.53
ITGA6-202ENST00000409080 AGAP20933 346 aa11.72□□□□□ -0.53
ITGA6-202ENST00000409080 FAM3BP58499 235 aaPredicted RBP11.72□□□□□ -0.53
ITGA6-202ENST00000409080 FAM71F2Q6NXP2 309 aa11.72□□□□□ -0.53
ITGA6-202ENST00000409080 TMEM190Q8WZ59 177 aa11.72□□□□□ -0.53
ITGA6-202ENST00000409080 C9JCJ5 164 aa11.71□□□□□ -0.53
ITGA6-202ENST00000409080 ETV2O00321 342 aaPredicted RBP11.71□□□□□ -0.53
ITGA6-202ENST00000409080 WISP1O95388 367 aa11.71□□□□□ -0.53
ITGA6-202ENST00000409080 KLRD1Q13241 179 aa11.71□□□□□ -0.53
ITGA6-202ENST00000409080 PLXNA4Q9HCM2 1894 aa11.71□□□□□ -0.53
ITGA6-202ENST00000409080 HTN3P15516 51 aa11.71□□□□□ -0.54
ITGA6-202ENST00000409080 SLC25A48Q6ZT89 311 aaKnown RBP11.71□□□□□ -0.54
ITGA6-202ENST00000409080 CD177Q8N6Q3 437 aa11.71□□□□□ -0.54
ITGA6-202ENST00000409080 OR8A1Q8NGG7 326 aa11.71□□□□□ -0.54
ITGA6-202ENST00000409080 COPS9Q8WXC6 57 aa11.71□□□□□ -0.54
ITGA6-202ENST00000409080 CACNA1HO95180 2353 aa11.71□□□□□ -0.54
ITGA6-202ENST00000409080 RNF224P0DH78 156 aa11.71□□□□□ -0.54
ITGA6-202ENST00000409080 BTF3P20290 206 aaKnown RBP11.71□□□□□ -0.54
ITGA6-202ENST00000409080 NEUROG1Q92886 237 aa11.71□□□□□ -0.54
ITGA6-202ENST00000409080 EFNB3Q15768 340 aa11.7□□□□□ -0.54
ITGA6-202ENST00000409080 ZNF324BQ6AW86 544 aaPredicted RBP11.7□□□□□ -0.54
ITGA6-202ENST00000409080 TMEM219Q86XT9 240 aa11.7□□□□□ -0.54
ITGA6-202ENST00000409080 LOC389332A0A1B0GUA5 103 aa11.7□□□□□ -0.54
ITGA6-202ENST00000409080 M0R3E3 92 aa11.7□□□□□ -0.54
ITGA6-202ENST00000409080 ZNF324O75467 553 aaPredicted RBP11.7□□□□□ -0.54
ITGA6-202ENST00000409080 NUDT3O95989 172 aa11.7□□□□□ -0.54
ITGA6-202ENST00000409080 TFF1P04155 84 aa11.7□□□□□ -0.54
ITGA6-202ENST00000409080 PRSS8Q16651 343 aa11.7□□□□□ -0.54
ITGA6-202ENST00000409080 C2orf68Q2NKX9 166 aa11.7□□□□□ -0.54
ITGA6-202ENST00000409080 OR1N2Q8NGR9 330 aa11.7□□□□□ -0.54
ITGA6-202ENST00000409080 TRAF4Q9BUZ4 470 aaPredicted RBP11.7□□□□□ -0.54
ITGA6-202ENST00000409080 J3QRE1 110 aa11.7□□□□□ -0.54
ITGA6-202ENST00000409080 OR1P1Q8NH06 330 aa11.7□□□□□ -0.54
ITGA6-202ENST00000409080 FMC1Q96HJ9 113 aa11.7□□□□□ -0.54
ITGA6-202ENST00000409080 PGLYRP4Q96LB8 373 aa11.7□□□□□ -0.54
ITGA6-202ENST00000409080 BUB1B-PAK6H3BSN5 160 aa11.69□□□□□ -0.54
ITGA6-202ENST00000409080 HGFACQ04756 655 aa11.69□□□□□ -0.54
ITGA6-202ENST00000409080 DEFB121Q5J5C9 76 aa11.69□□□□□ -0.54
ITGA6-202ENST00000409080 RTBDNQ9BSG5 229 aaPredicted RBP11.69□□□□□ -0.54
ITGA6-202ENST00000409080 PNRC2Q9NPJ4 139 aaKnown RBP11.69□□□□□ -0.54
ITGA6-202ENST00000409080 C1QL1O75973 258 aa11.69□□□□□ -0.54
ITGA6-202ENST00000409080 TDGF1P13385 188 aa11.69□□□□□ -0.54
ITGA6-202ENST00000409080 SRSF9Q13242 221 aaKnown RBP eCLIP11.69□□□□□ -0.54
ITGA6-202ENST00000409080 TMEM42Q69YG0 159 aa11.69□□□□□ -0.54
ITGA6-202ENST00000409080 ESPL1Q14674 2120 aa11.69□□□□□ -0.54
ITGA6-202ENST00000409080 DTX2Q86UW9 622 aa11.69□□□□□ -0.54
ITGA6-202ENST00000409080 KLF2Q9Y5W3 355 aaPredicted RBP11.69□□□□□ -0.54
ITGA6-202ENST00000409080 NUP210Q8TEM1 1887 aaPredicted RBP11.69□□□□□ -0.54
ITGA6-202ENST00000409080 TNFSF13O75888 250 aa11.69□□□□□ -0.54
ITGA6-202ENST00000409080 CXCL2P19875 107 aa11.69□□□□□ -0.54
ITGA6-202ENST00000409080 CD81P60033 236 aa11.69□□□□□ -0.54
ITGA6-202ENST00000409080 C5orf64Q2M2E5 130 aa11.69□□□□□ -0.54
ITGA6-202ENST00000409080 ZNF585BQ52M93 769 aa11.69□□□□□ -0.54
ITGA6-202ENST00000409080 CD8AP01732 235 aa11.68□□□□□ -0.54
ITGA6-202ENST00000409080 EGR1P18146 543 aa11.68□□□□□ -0.54
ITGA6-202ENST00000409080 UBE2E1P51965 193 aa11.68□□□□□ -0.54
ITGA6-202ENST00000409080 EMP1P54849 157 aa11.68□□□□□ -0.54
ITGA6-202ENST00000409080 SLX1AQ9BQ83 275 aa11.68□□□□□ -0.54
ITGA6-202ENST00000409080 OTORQ9NRC9 128 aa11.68□□□□□ -0.54
ITGA6-202ENST00000409080 ZFP30Q9Y2G7 519 aa11.68□□□□□ -0.54
ITGA6-202ENST00000409080 TRBV7-1A0A0A6YYK4 115 aa11.68□□□□□ -0.54
ITGA6-202ENST00000409080 CIARTQ8N365 385 aaPredicted RBP11.68□□□□□ -0.54
ITGA6-202ENST00000409080 IGKV1-12A0A0C4DH73 117 aa11.68□□□□□ -0.54
ITGA6-202ENST00000409080 SHISA3A0PJX4 238 aa11.68□□□□□ -0.54
ITGA6-202ENST00000409080 PHOX2AO14813 284 aa11.68□□□□□ -0.54
ITGA6-202ENST00000409080 IGKV1D-12P01611 117 aa11.68□□□□□ -0.54
ITGA6-202ENST00000409080 SELLP14151 372 aa11.68□□□□□ -0.54
ITGA6-202ENST00000409080 Q8TCH9 128 aa11.68□□□□□ -0.54
ITGA6-202ENST00000409080 IGKV1D-13A0A0B4J2D9 117 aa11.68□□□□□ -0.54
ITGA6-202ENST00000409080 FAM223BA6NKX1 122 aa11.68□□□□□ -0.54
ITGA6-202ENST00000409080 OVOL1O14753 267 aa11.68□□□□□ -0.54
ITGA6-202ENST00000409080 DANCRP0C864 163 aa11.68□□□□□ -0.54
ITGA6-202ENST00000409080 IGKV1-13P0DP09 117 aa11.68□□□□□ -0.54
ITGA6-202ENST00000409080 FAM223AQ8IWN6 122 aa11.68□□□□□ -0.54
ITGA6-202ENST00000409080 SGK494Q96LW2 274 aa11.67□□□□□ -0.54
ITGA6-202ENST00000409080 FOSL1P15407 271 aa11.67□□□□□ -0.54
ITGA6-202ENST00000409080 PSMB2P49721 201 aa11.67□□□□□ -0.54
ITGA6-202ENST00000409080 OR11H4Q8NGC9 324 aa11.67□□□□□ -0.54
ITGA6-202ENST00000409080 ASCL2Q99929 193 aa11.67□□□□□ -0.54
ITGA6-202ENST00000409080 NLRC5Q86WI3 1866 aa11.67□□□□□ -0.54
ITGA6-202ENST00000409080 MPZP25189 248 aa11.67□□□□□ -0.54
ITGA6-202ENST00000409080 RNASE4P34096 147 aaKnown RBP11.67□□□□□ -0.54
ITGA6-202ENST00000409080 CR1LQ2VPA4 569 aa11.67□□□□□ -0.54
ITGA6-202ENST00000409080 KLHL30-AS1Q8NEE0 82 aa11.67□□□□□ -0.54
ITGA6-202ENST00000409080 MBNL3Q9NUK0 354 aaKnown RBP11.67□□□□□ -0.54
ITGA6-202ENST00000409080 MYO7BQ6PIF6 2116 aa11.67□□□□□ -0.54
ITGA6-202ENST00000409080 IGHV3OR16-8A0A075B7F1 116 aa11.67□□□□□ -0.54
ITGA6-202ENST00000409080 PRR32B1ATL7 298 aa11.67□□□□□ -0.54
ITGA6-202ENST00000409080 TMEM250H0YL14 139 aa11.67□□□□□ -0.54
ITGA6-202ENST00000409080 MLNRO43193 412 aa11.67□□□□□ -0.54
ITGA6-202ENST00000409080 OTX1P32242 354 aaPredicted RBP11.67□□□□□ -0.54
ITGA6-202ENST00000409080 SAA4P35542 130 aa11.67□□□□□ -0.54
ITGA6-202ENST00000409080 GEMIN7Q9H840 131 aaKnown RBP11.67□□□□□ -0.54
ITGA6-202ENST00000409080 TRGV11A0A075B6L2 103 aa11.67□□□□□ -0.54
ITGA6-202ENST00000409080 GATA4P43694 442 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms