RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 SLC35E4Q6ICL7 350 aa7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 SUMF2Q8NBJ7 301 aa7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 OR1N2Q8NGR9 330 aa7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 PP6455Q8WZ26 134 aa7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 FAM46BQ96A09 425 aa7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 YPEL2Q96QA6 119 aa7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 PDCD1LG2Q9BQ51 273 aa7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 ABHD14AQ9BUJ0 271 aa7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 FAM234AQ9H0X4 552 aa7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 ZNF586Q9NXT0 402 aa7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 TRAV1-2A0A0B4J238 106 aa7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 A0A1B0GUS0 222 aa7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 IGSF23A1L1A6 192 aa7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 C17orf98A8MV24 154 aa7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 RAB27BO00194 218 aa7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 SIRPB1O00241 398 aa7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 CHRM2P08172 466 aa7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 LIMS3P0CW19 117 aa7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 LIMS4P0CW20 117 aa7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 LYL1P12980 280 aa7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 SNRPBP14678 240 aaKnown RBP7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 RPL15P61313 204 aaKnown RBP7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 RPL23AP62750 156 aaKnown RBP7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 UTF1Q5T230 341 aa7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 UNQ5815/PRO19632Q6UWF5 114 aa7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 TMEM182Q6ZP80 229 aaPredicted RBP7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 NR2C2APQ86WQ0 139 aa7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 ZNF676Q8N7Q3 588 aa7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 OR10X1Q8NGY0 326 aa7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 TMEM170AQ8WVE7 144 aa7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 C10orf35Q96D05 121 aa7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 TVP23CQ96ET8 276 aa7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 MS4A10Q96PG2 267 aa7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 PSMG3Q9BT73 122 aaPredicted RBP7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 CTDSP1Q9GZU7 261 aa7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 C16orf95Q9H693 158 aa7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 SPANXA1Q9NS26 97 aa7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 HHLA2Q9UM44 414 aa7.79□□□□□ -1.16
NIF3L1-202ENST00000409020 TRBV2A0A0J9YWF9 115 aa7.78□□□□□ -1.16
NIF3L1-202ENST00000409020 A0A1B0GU03 582 aa7.78□□□□□ -1.16
NIF3L1-202ENST00000409020 ODF3BA8MYP8 253 aa7.78□□□□□ -1.16
NIF3L1-202ENST00000409020 K7EQM0 130 aa7.78□□□□□ -1.16
NIF3L1-202ENST00000409020 SLC17A3O00476 420 aa7.78□□□□□ -1.16
NIF3L1-202ENST00000409020 SIVA1O15304 175 aa7.78□□□□□ -1.16
NIF3L1-202ENST00000409020 CTSDP07339 412 aaPredicted RBP7.78□□□□□ -1.16
NIF3L1-202ENST00000409020 ZNF728P0DKX0 622 aa7.78□□□□□ -1.16
NIF3L1-202ENST00000409020 IGHV1-8P0DP01 117 aa7.78□□□□□ -1.16
NIF3L1-202ENST00000409020 ID1P41134 155 aa7.78□□□□□ -1.16
NIF3L1-202ENST00000409020 ATP1B3P54709 279 aa7.78□□□□□ -1.16
NIF3L1-202ENST00000409020 PAFAH1B2P68402 229 aa7.78□□□□□ -1.16
NIF3L1-202ENST00000409020 SSBP1Q04837 148 aaKnown RBP7.78□□□□□ -1.16
NIF3L1-202ENST00000409020 DHRS2Q13268 280 aa7.78□□□□□ -1.16
NIF3L1-202ENST00000409020 ZNF146Q15072 292 aa7.78□□□□□ -1.16
NIF3L1-202ENST00000409020 LRRC75BQ2VPJ9 315 aa7.78□□□□□ -1.16
NIF3L1-202ENST00000409020 TDRG1Q3Y452 100 aa7.78□□□□□ -1.16
NIF3L1-202ENST00000409020 RNASE12Q5GAN4 147 aaKnown RBP7.78□□□□□ -1.16
NIF3L1-202ENST00000409020 Q6ZRG5 221 aa7.78□□□□□ -1.16
NIF3L1-202ENST00000409020 KLHDC1Q8N7A1 406 aa7.78□□□□□ -1.16
NIF3L1-202ENST00000409020 PPP1R1CQ8WVI7 109 aa7.78□□□□□ -1.16
NIF3L1-202ENST00000409020 OR5B12Q96R08 314 aa7.78□□□□□ -1.16
NIF3L1-202ENST00000409020 PYGO2Q9BRQ0 406 aa7.78□□□□□ -1.16
NIF3L1-202ENST00000409020 STRAPQ9Y3F4 350 aaKnown RBP7.78□□□□□ -1.16
NIF3L1-202ENST00000409020 DNAH9Q9NYC9 4486 aa7.78□□□□□ -1.16
NIF3L1-202ENST00000409020 FAM90A8PA6NJQ4 464 aa7.77□□□□□ -1.17
NIF3L1-202ENST00000409020 H3BQ15 152 aa7.77□□□□□ -1.17
NIF3L1-202ENST00000409020 H7BYZ3 331 aa7.77□□□□□ -1.17
NIF3L1-202ENST00000409020 OR2H2O95918 312 aa7.77□□□□□ -1.17
NIF3L1-202ENST00000409020 GAPDHP04406 335 aaKnown RBP7.77□□□□□ -1.17
NIF3L1-202ENST00000409020 F2RP25116 425 aa7.77□□□□□ -1.17
NIF3L1-202ENST00000409020 PLP1P60201 277 aa7.77□□□□□ -1.17
NIF3L1-202ENST00000409020 TMEM219Q86XT9 240 aa7.77□□□□□ -1.17
NIF3L1-202ENST00000409020 LGI3Q8N145 548 aa7.77□□□□□ -1.17
NIF3L1-202ENST00000409020 SYS1Q8N2H4 156 aa7.77□□□□□ -1.17
NIF3L1-202ENST00000409020 C11orf44Q8N8P7 122 aa7.77□□□□□ -1.17
NIF3L1-202ENST00000409020 OR51A2Q8NGJ7 313 aa7.77□□□□□ -1.17
NIF3L1-202ENST00000409020 ZNF714Q96N38 554 aa7.77□□□□□ -1.17
NIF3L1-202ENST00000409020 AQP10Q96PS8 301 aa7.77□□□□□ -1.17
NIF3L1-202ENST00000409020 EIF5A2Q9GZV4 153 aaKnown RBP7.77□□□□□ -1.17
NIF3L1-202ENST00000409020 OR2S2Q9NQN1 319 aa7.77□□□□□ -1.17
NIF3L1-202ENST00000409020 INPP5EQ9NRR6 644 aa7.77□□□□□ -1.17
NIF3L1-202ENST00000409020 ZNF581Q9P0T4 197 aa7.77□□□□□ -1.17
NIF3L1-202ENST00000409020 AK6Q9Y3D8 172 aaKnown RBP7.77□□□□□ -1.17
NIF3L1-202ENST00000409020 SIRT4Q9Y6E7 314 aaPredicted RBP7.77□□□□□ -1.17
NIF3L1-202ENST00000409020 DSCAML1Q8TD84 2053 aa7.77□□□□□ -1.17
NIF3L1-202ENST00000409020 LMO1P25800 156 aa7.76□□□□□ -1.17
NIF3L1-202ENST00000409020 SOX2P48431 317 aa7.76□□□□□ -1.17
NIF3L1-202ENST00000409020 PNRC1Q12796 327 aaPredicted RBP7.76□□□□□ -1.17
NIF3L1-202ENST00000409020 LTC4SQ16873 150 aa7.76□□□□□ -1.17
NIF3L1-202ENST00000409020 ZNF343Q6P1L6 599 aa7.76□□□□□ -1.17
NIF3L1-202ENST00000409020 Q6P435 159 aa7.76□□□□□ -1.17
NIF3L1-202ENST00000409020 NEGR1Q7Z3B1 354 aa7.76□□□□□ -1.17
NIF3L1-202ENST00000409020 OR2C3Q8N628 320 aa7.76□□□□□ -1.17
NIF3L1-202ENST00000409020 NHLRC2Q8NBF2 726 aa7.76□□□□□ -1.17
NIF3L1-202ENST00000409020 DAZAP1Q96EP5 407 aaKnown RBP7.76□□□□□ -1.17
NIF3L1-202ENST00000409020 RFNGQ9Y644 331 aa7.76□□□□□ -1.17
NIF3L1-202ENST00000409020 IGHV2-26A0A0B4J1V2 119 aa7.76□□□□□ -1.17
NIF3L1-202ENST00000409020 ZNF727A8MUV8 499 aa7.76□□□□□ -1.17
NIF3L1-202ENST00000409020 F8WDY8 70 aa7.76□□□□□ -1.17
NIF3L1-202ENST00000409020 CSTBP04080 98 aaKnown RBP7.76□□□□□ -1.17
NIF3L1-202ENST00000409020 CD34P28906 385 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms