RNA–Protein interactions for RNA: ENST00000407595.2

CCDC85A-201, Transcript of coiled-coil domain containing 85A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC85A, Length 3,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85A-201ENST00000407595 FREM2Q5SZK8 3169 aa13.04□□□□□ -0.32
CCDC85A-201ENST00000407595 J3QR06 171 aa13.04□□□□□ -0.32
CCDC85A-201ENST00000407595 MLNRO43193 412 aa13.04□□□□□ -0.32
CCDC85A-201ENST00000407595 SLC25A5P05141 298 aaKnown RBP13.04□□□□□ -0.32
CCDC85A-201ENST00000407595 TCTAP57738 103 aa13.04□□□□□ -0.32
CCDC85A-201ENST00000407595 PIP4P1Q86T03 277 aa13.04□□□□□ -0.32
CCDC85A-201ENST00000407595 RNASEH2CQ8TDP1 164 aaKnown RBP13.04□□□□□ -0.32
CCDC85A-201ENST00000407595 NEUROG1Q92886 237 aa13.04□□□□□ -0.32
CCDC85A-201ENST00000407595 ST6GALNAC6Q969X2 333 aa13.04□□□□□ -0.32
CCDC85A-201ENST00000407595 NRN1Q9NPD7 142 aa13.04□□□□□ -0.32
CCDC85A-201ENST00000407595 TNFRSF19Q9NS68 423 aa13.04□□□□□ -0.32
CCDC85A-201ENST00000407595 POLQO75417 2590 aa13.03□□□□□ -0.32
CCDC85A-201ENST00000407595 IQCF6A8MYZ5 107 aa13.03□□□□□ -0.32
CCDC85A-201ENST00000407595 NPSP0C0P6 89 aa13.03□□□□□ -0.32
CCDC85A-201ENST00000407595 ARF6P62330 175 aa13.03□□□□□ -0.32
CCDC85A-201ENST00000407595 ADH4P08319 380 aa13.03□□□□□ -0.32
CCDC85A-201ENST00000407595 TNXAQ16473 311 aa13.03□□□□□ -0.32
CCDC85A-201ENST00000407595 SPSB4Q96A44 273 aa13.03□□□□□ -0.32
CCDC85A-201ENST00000407595 IL6RP08887 468 aaPredicted RBP13.03□□□□□ -0.32
CCDC85A-201ENST00000407595 ZNF738Q8NE65 137 aa13.03□□□□□ -0.32
CCDC85A-201ENST00000407595 RNF2Q99496 336 aa13.03□□□□□ -0.32
CCDC85A-201ENST00000407595 CD99P14209 185 aa13.02□□□□□ -0.32
CCDC85A-201ENST00000407595 ZNF497Q6ZNH5 498 aa13.02□□□□□ -0.32
CCDC85A-201ENST00000407595 MUC15Q8N387 334 aa13.02□□□□□ -0.32
CCDC85A-201ENST00000407595 ELOVL5Q9NYP7 299 aa13.02□□□□□ -0.32
CCDC85A-201ENST00000407595 CA1P00915 261 aaPredicted RBP13.02□□□□□ -0.33
CCDC85A-201ENST00000407595 TIMP3P35625 211 aa13.02□□□□□ -0.33
CCDC85A-201ENST00000407595 TBR1Q16650 682 aa13.02□□□□□ -0.33
CCDC85A-201ENST00000407595 ZNF114Q8NC26 417 aa13.02□□□□□ -0.33
CCDC85A-201ENST00000407595 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.02□□□□□ -0.33
CCDC85A-201ENST00000407595 DNLZQ5SXM8 178 aa13.02□□□□□ -0.33
CCDC85A-201ENST00000407595 Q6ZS92 163 aa13.02□□□□□ -0.33
CCDC85A-201ENST00000407595 TXNDC17Q9BRA2 123 aa13.02□□□□□ -0.33
CCDC85A-201ENST00000407595 RAB1BQ9H0U4 201 aa13.02□□□□□ -0.33
CCDC85A-201ENST00000407595 FASNP49327 2511 aaKnown RBP13.02□□□□□ -0.33
CCDC85A-201ENST00000407595 IGFBP2P18065 325 aa13.01□□□□□ -0.33
CCDC85A-201ENST00000407595 CDKN1AP38936 164 aa13.01□□□□□ -0.33
CCDC85A-201ENST00000407595 HCP5Q6MZN7 132 aa13.01□□□□□ -0.33
CCDC85A-201ENST00000407595 FAM122AQ96E09 287 aa13.01□□□□□ -0.33
CCDC85A-201ENST00000407595 AGMATQ9BSE5 352 aa13.01□□□□□ -0.33
CCDC85A-201ENST00000407595 SPATA31B1PQ5VZV4 182 aa13.01□□□□□ -0.33
CCDC85A-201ENST00000407595 WDR31Q8NA23 367 aa13.01□□□□□ -0.33
CCDC85A-201ENST00000407595 RNF138Q8WVD3 245 aa13.01□□□□□ -0.33
CCDC85A-201ENST00000407595 TNFSF13O75888 250 aa13.01□□□□□ -0.33
CCDC85A-201ENST00000407595 MT-ND6P03923 174 aa13.01□□□□□ -0.33
CCDC85A-201ENST00000407595 OR9G9P0C7N8 305 aa13.01□□□□□ -0.33
CCDC85A-201ENST00000407595 Q6ZPA2 131 aa13.01□□□□□ -0.33
CCDC85A-201ENST00000407595 MIR17HGQ75NE6 70 aa13.01□□□□□ -0.33
CCDC85A-201ENST00000407595 PLSCR4Q9NRQ2 329 aa13.01□□□□□ -0.33
CCDC85A-201ENST00000407595 WDR83OSQ9Y284 106 aa13.01□□□□□ -0.33
CCDC85A-201ENST00000407595 INSIG2Q9Y5U4 225 aa13.01□□□□□ -0.33
CCDC85A-201ENST00000407595 A0A0G2JNJ9 132 aa13□□□□□ -0.33
CCDC85A-201ENST00000407595 REG1AP05451 166 aa13□□□□□ -0.33
CCDC85A-201ENST00000407595 FOXA3P55318 350 aaPredicted RBP13□□□□□ -0.33
CCDC85A-201ENST00000407595 RAB1CQ92928 201 aa13□□□□□ -0.33
CCDC85A-201ENST00000407595 NABP2Q9BQ15 211 aa13□□□□□ -0.33
CCDC85A-201ENST00000407595 GNB4Q9HAV0 340 aa13□□□□□ -0.33
CCDC85A-201ENST00000407595 Q9UFV3 132 aa13□□□□□ -0.33
CCDC85A-201ENST00000407595 OR2T6Q8NHC8 308 aa13□□□□□ -0.33
CCDC85A-201ENST00000407595 ZNF714Q96N38 554 aa13□□□□□ -0.33
CCDC85A-201ENST00000407595 DIRC2Q96SL1 478 aa13□□□□□ -0.33
CCDC85A-201ENST00000407595 SPRY4Q9C004 299 aa13□□□□□ -0.33
CCDC85A-201ENST00000407595 NUPR1O60356 82 aa13□□□□□ -0.33
CCDC85A-201ENST00000407595 OR51B2Q9Y5P1 312 aa13□□□□□ -0.33
CCDC85A-201ENST00000407595 RBFOX2O43251 390 aaKnown RBP eCLIP12.99□□□□□ -0.33
CCDC85A-201ENST00000407595 GPR6P46095 362 aaPredicted RBP12.99□□□□□ -0.33
CCDC85A-201ENST00000407595 UCNP55089 124 aa12.99□□□□□ -0.33
CCDC85A-201ENST00000407595 HES4Q9HCC6 221 aa12.99□□□□□ -0.33
CCDC85A-201ENST00000407595 LAMTOR2Q9Y2Q5 125 aa12.99□□□□□ -0.33
CCDC85A-201ENST00000407595 SERTM2A0A1B0GWG4 89 aa12.99□□□□□ -0.33
CCDC85A-201ENST00000407595 CA2P00918 260 aa12.99□□□□□ -0.33
CCDC85A-201ENST00000407595 IGHG3P01860 377 aa12.99□□□□□ -0.33
CCDC85A-201ENST00000407595 HLA-DQA1P01909 254 aa12.99□□□□□ -0.33
CCDC85A-201ENST00000407595 DLX1P56177 255 aa12.99□□□□□ -0.33
CCDC85A-201ENST00000407595 FOXL1Q12952 345 aa12.99□□□□□ -0.33
CCDC85A-201ENST00000407595 SEPSECSQ9HD40 501 aaKnown RBP12.99□□□□□ -0.33
CCDC85A-201ENST00000407595 A1L4Q6 167 aa12.99□□□□□ -0.33
CCDC85A-201ENST00000407595 H3BTX0 84 aa12.99□□□□□ -0.33
CCDC85A-201ENST00000407595 SLC25A17O43808 307 aa12.99□□□□□ -0.33
CCDC85A-201ENST00000407595 RBP4P02753 201 aa12.99□□□□□ -0.33
CCDC85A-201ENST00000407595 CD24P25063 80 aa12.99□□□□□ -0.33
CCDC85A-201ENST00000407595 TDRG1Q3Y452 100 aa12.99□□□□□ -0.33
CCDC85A-201ENST00000407595 Q6ZS49 121 aa12.99□□□□□ -0.33
CCDC85A-201ENST00000407595 ZNRD1Q9P1U0 126 aa12.99□□□□□ -0.33
CCDC85A-201ENST00000407595 SLC25A15Q9Y619 301 aa12.99□□□□□ -0.33
CCDC85A-201ENST00000407595 IGHV3OR16-10A0A075B7F0 116 aa12.98□□□□□ -0.33
CCDC85A-201ENST00000407595 BPIFB3P59826 476 aa12.98□□□□□ -0.33
CCDC85A-201ENST00000407595 VMA21Q3ZAQ7 101 aa12.98□□□□□ -0.33
CCDC85A-201ENST00000407595 LEMD1Q68G75 181 aa12.98□□□□□ -0.33
CCDC85A-201ENST00000407595 LCN12Q6JVE5 192 aa12.98□□□□□ -0.33
CCDC85A-201ENST00000407595 TREML4Q6UXN2 200 aa12.98□□□□□ -0.33
CCDC85A-201ENST00000407595 FLYWCH2Q96CP2 140 aaKnown RBP12.98□□□□□ -0.33
CCDC85A-201ENST00000407595 YPEL4Q96NS1 127 aa12.98□□□□□ -0.33
CCDC85A-201ENST00000407595 SUB1P53999 127 aaKnown RBP eCLIP12.98□□□□□ -0.33
CCDC85A-201ENST00000407595 SRSF7Q16629 238 aaKnown RBP eCLIP12.98□□□□□ -0.33
CCDC85A-201ENST00000407595 ODF3L1Q8IXM7 274 aa12.98□□□□□ -0.33
CCDC85A-201ENST00000407595 C1orf162Q8NEQ5 155 aaPredicted RBP12.98□□□□□ -0.33
CCDC85A-201ENST00000407595 EAF1Q96JC9 268 aaPredicted RBP12.98□□□□□ -0.33
CCDC85A-201ENST00000407595 LINC00473A8K010 186 aa12.97□□□□□ -0.33
CCDC85A-201ENST00000407595 FOXH1O75593 365 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms