RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 MISP3Q96FF7 219 aa22.68■■□□□ 1.22
USP42-202ENST00000404008 RAX2Q96IS3 184 aa22.68■■□□□ 1.22
USP42-202ENST00000404008 U3KQ87 197 aa22.68■■□□□ 1.22
USP42-202ENST00000404008 MFSD2BA6NFX1 497 aa22.67■■□□□ 1.22
USP42-202ENST00000404008 SIX6O95475 246 aa22.67■■□□□ 1.22
USP42-202ENST00000404008 MBPP02686 304 aaPredicted RBP22.67■■□□□ 1.22
USP42-202ENST00000404008 ETV3LQ6ZN32 361 aa22.67■■□□□ 1.22
USP42-202ENST00000404008 TMEM170AQ8WVE7 144 aa22.67■■□□□ 1.22
USP42-202ENST00000404008 CXorf58Q96LI9 332 aa22.67■■□□□ 1.22
USP42-202ENST00000404008 CIB3Q96Q77 187 aaPredicted RBP22.67■■□□□ 1.22
USP42-202ENST00000404008 K7EIM0 57 aa22.66■■□□□ 1.22
USP42-202ENST00000404008 NPY1RP25929 384 aa22.66■■□□□ 1.22
USP42-202ENST00000404008 IL15RAQ13261 267 aa22.66■■□□□ 1.22
USP42-202ENST00000404008 VN1R17PQ8TDU5 208 aa22.66■■□□□ 1.22
USP42-202ENST00000404008 EEF1AKMT3Q96AZ1 226 aa22.66■■□□□ 1.22
USP42-202ENST00000404008 DUX3Q96PT4 197 aa22.66■■□□□ 1.22
USP42-202ENST00000404008 MGAT4CQ9UBM8 478 aa22.66■■□□□ 1.22
USP42-202ENST00000404008 S4R3C0 116 aa22.66■■□□□ 1.22
USP42-202ENST00000404008 CCL24O00175 119 aa22.65■■□□□ 1.22
USP42-202ENST00000404008 WRBO00258 174 aa22.65■■□□□ 1.22
USP42-202ENST00000404008 SSSCA1O60232 199 aa22.65■■□□□ 1.22
USP42-202ENST00000404008 IFNA10P01566 189 aa22.65■■□□□ 1.22
USP42-202ENST00000404008 H2BFSP57053 126 aa22.65■■□□□ 1.22
USP42-202ENST00000404008 OR11H1Q8NG94 326 aa22.65■■□□□ 1.22
USP42-202ENST00000404008 RCL1Q9Y2P8 373 aaKnown RBP22.65■■□□□ 1.22
USP42-202ENST00000404008 I3L2K1 104 aa22.64■■□□□ 1.22
USP42-202ENST00000404008 CORTO00230 105 aa22.64■■□□□ 1.22
USP42-202ENST00000404008 LY86O95711 162 aa22.64■■□□□ 1.22
USP42-202ENST00000404008 CCDC140Q96MF4 163 aa22.64■■□□□ 1.22
USP42-202ENST00000404008 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP22.63■■□□□ 1.21
USP42-202ENST00000404008 TRBV7-1A0A0A6YYK4 115 aa22.63■■□□□ 1.21
USP42-202ENST00000404008 ANKRD34BA5PLL1 514 aa22.63■■□□□ 1.21
USP42-202ENST00000404008 IGHV3-23P01764 117 aa22.63■■□□□ 1.21
USP42-202ENST00000404008 ATP5IP56385 69 aaPredicted RBP22.63■■□□□ 1.21
USP42-202ENST00000404008 FHL3Q13643 280 aa22.63■■□□□ 1.21
USP42-202ENST00000404008 NOXA1Q86UR1 476 aa22.63■■□□□ 1.21
USP42-202ENST00000404008 OR1N2Q8NGR9 330 aa22.63■■□□□ 1.21
USP42-202ENST00000404008 SCARB1Q8WTV0 552 aa22.63■■□□□ 1.21
USP42-202ENST00000404008 PINX1Q96BK5 328 aaKnown RBP22.63■■□□□ 1.21
USP42-202ENST00000404008 NMES1Q9C002 83 aa22.63■■□□□ 1.21
USP42-202ENST00000404008 PEF1Q9UBV8 284 aaKnown RBP22.63■■□□□ 1.21
USP42-202ENST00000404008 CMYA5Q8N3K9 4069 aa22.63■■□□□ 1.21
USP42-202ENST00000404008 IGHV4OR15-8A0A075B7B6 117 aa22.63■■□□□ 1.21
USP42-202ENST00000404008 A0A087WW49 117 aa22.63■■□□□ 1.21
USP42-202ENST00000404008 IGHV3-21A0A0B4J1V1 117 aa22.63■■□□□ 1.21
USP42-202ENST00000404008 MT-CO2P00403 227 aa22.63■■□□□ 1.21
USP42-202ENST00000404008 TRBV12-3P01733 135 aa22.63■■□□□ 1.21
USP42-202ENST00000404008 HSPB1P04792 205 aaKnown RBP22.63■■□□□ 1.21
USP42-202ENST00000404008 MYCNOSP40205 109 aa22.63■■□□□ 1.21
USP42-202ENST00000404008 ZNF502Q8TBZ5 544 aa22.63■■□□□ 1.21
USP42-202ENST00000404008 MED28Q9H204 178 aa22.63■■□□□ 1.21
USP42-202ENST00000404008 K7EPK0 472 aa22.62■■□□□ 1.21
USP42-202ENST00000404008 PF4P02776 101 aa22.62■■□□□ 1.21
USP42-202ENST00000404008 ZNF616Q08AN1 781 aa22.62■■□□□ 1.21
USP42-202ENST00000404008 FAM209BQ5JX69 171 aa22.62■■□□□ 1.21
USP42-202ENST00000404008 RNASEH2CQ8TDP1 164 aaKnown RBP22.62■■□□□ 1.21
USP42-202ENST00000404008 RAB40CQ96S21 281 aa22.62■■□□□ 1.21
USP42-202ENST00000404008 RANGRFQ9HD47 186 aaPredicted RBP22.62■■□□□ 1.21
USP42-202ENST00000404008 C15orf62A8K5M9 175 aa22.61■■□□□ 1.21
USP42-202ENST00000404008 TMEM50AO95807 157 aa22.61■■□□□ 1.21
USP42-202ENST00000404008 PAX9P55771 341 aa22.61■■□□□ 1.21
USP42-202ENST00000404008 PRR31Q5SQ13 230 aa22.61■■□□□ 1.21
USP42-202ENST00000404008 SMIM8Q96KF7 97 aa22.61■■□□□ 1.21
USP42-202ENST00000404008 C21orf62Q9NYP8 219 aa22.61■■□□□ 1.21
USP42-202ENST00000404008 LSM5Q9Y4Y9 91 aaKnown RBP22.61■■□□□ 1.21
USP42-202ENST00000404008 LINC01619G3V211 115 aa22.6■■□□□ 1.21
USP42-202ENST00000404008 CXCL3P19876 107 aa22.6■■□□□ 1.21
USP42-202ENST00000404008 RPP30P78346 268 aaKnown RBP22.6■■□□□ 1.21
USP42-202ENST00000404008 CYCSP99999 105 aaKnown RBP22.6■■□□□ 1.21
USP42-202ENST00000404008 RAB32Q13637 225 aa22.6■■□□□ 1.21
USP42-202ENST00000404008 FCN2Q15485 313 aa22.6■■□□□ 1.21
USP42-202ENST00000404008 CLEC19AQ6UXS0 136 aa22.6■■□□□ 1.21
USP42-202ENST00000404008 DPF1Q92782 380 aa22.6■■□□□ 1.21
USP42-202ENST00000404008 OR4C12Q96R67 309 aa22.6■■□□□ 1.21
USP42-202ENST00000404008 FNDC4Q9H6D8 234 aaPredicted RBP22.6■■□□□ 1.21
USP42-202ENST00000404008 H3BP45 60 aa22.59■■□□□ 1.21
USP42-202ENST00000404008 OPRK1P41145 380 aa22.59■■□□□ 1.21
USP42-202ENST00000404008 S100A10P60903 97 aa22.59■■□□□ 1.21
USP42-202ENST00000404008 OR11H7Q8NGC8 314 aa22.59■■□□□ 1.21
USP42-202ENST00000404008 WDR89Q96FK6 387 aaPredicted RBP22.59■■□□□ 1.21
USP42-202ENST00000404008 PSENENQ9NZ42 101 aa22.59■■□□□ 1.21
USP42-202ENST00000404008 WNK1Q9H4A3 2382 aa22.59■■□□□ 1.21
USP42-202ENST00000404008 F8W735 103 aaPredicted RBP22.58■■□□□ 1.21
USP42-202ENST00000404008 IGHV3-48P01763 117 aa22.58■■□□□ 1.21
USP42-202ENST00000404008 OR8U8P0C7N1 319 aa22.58■■□□□ 1.21
USP42-202ENST00000404008 TAS2R30P59541 319 aa22.58■■□□□ 1.21
USP42-202ENST00000404008 RRAS2P62070 204 aaPredicted RBP22.58■■□□□ 1.21
USP42-202ENST00000404008 SPANXN5Q5MJ07 72 aa22.58■■□□□ 1.21
USP42-202ENST00000404008 ATP6V0BQ99437 205 aa22.58■■□□□ 1.21
USP42-202ENST00000404008 STRAPQ9Y3F4 350 aaKnown RBP22.58■■□□□ 1.21
USP42-202ENST00000404008 PPP5D1E7EU14 171 aa22.57■■□□□ 1.2
USP42-202ENST00000404008 BMPR1BO00238 502 aa22.57■■□□□ 1.2
USP42-202ENST00000404008 CLEC3BP05452 202 aa22.57■■□□□ 1.2
USP42-202ENST00000404008 RAB11AP62491 216 aa22.57■■□□□ 1.2
USP42-202ENST00000404008 LINC00482Q8N8I6 264 aa22.57■■□□□ 1.2
USP42-202ENST00000404008 C11orf1Q9H5F2 150 aa22.57■■□□□ 1.2
USP42-202ENST00000404008 IFNA4P05014 189 aa22.56■■□□□ 1.2
USP42-202ENST00000404008 FCGR2BP31994 310 aaPredicted RBP22.56■■□□□ 1.2
USP42-202ENST00000404008 GPR183P32249 361 aa22.56■■□□□ 1.2
USP42-202ENST00000404008 MLANAQ16655 118 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms