RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 TOMM20LQ6UXN7 152 aa8.67□□□□□ -1.02
LINC00544-201ENST00000400540 TSPAN14Q8NG11 270 aa8.67□□□□□ -1.02
LINC00544-201ENST00000400540 BORCS5Q969J3 196 aa8.67□□□□□ -1.02
LINC00544-201ENST00000400540 PINX1Q96BK5 328 aaKnown RBP8.67□□□□□ -1.02
LINC00544-201ENST00000400540 CMTM3Q96MX0 182 aa8.67□□□□□ -1.02
LINC00544-201ENST00000400540 ZFAND3Q9H8U3 227 aa8.67□□□□□ -1.02
LINC00544-201ENST00000400540 DIABLOQ9NR28 239 aa8.67□□□□□ -1.02
LINC00544-201ENST00000400540 ANAPC10Q9UM13 185 aa8.67□□□□□ -1.02
LINC00544-201ENST00000400540 IGHV4-28A0A0C4DH34 117 aa8.66□□□□□ -1.02
LINC00544-201ENST00000400540 GPR31O00270 319 aa8.66□□□□□ -1.02
LINC00544-201ENST00000400540 ST8SIA3O43173 380 aa8.66□□□□□ -1.02
LINC00544-201ENST00000400540 XRCC3O43542 346 aa8.66□□□□□ -1.02
LINC00544-201ENST00000400540 GNG7O60262 68 aa8.66□□□□□ -1.02
LINC00544-201ENST00000400540 DFFBO76075 338 aa8.66□□□□□ -1.02
LINC00544-201ENST00000400540 IGKV1-39P01597 117 aa8.66□□□□□ -1.02
LINC00544-201ENST00000400540 IGKV1D-39P04432 117 aa8.66□□□□□ -1.02
LINC00544-201ENST00000400540 GIG44P09565 113 aaPredicted RBP8.66□□□□□ -1.02
LINC00544-201ENST00000400540 TGFBR1P36897 503 aa8.66□□□□□ -1.02
LINC00544-201ENST00000400540 SPINK9Q5DT21 86 aa8.66□□□□□ -1.02
LINC00544-201ENST00000400540 CADM3Q8N126 398 aa8.66□□□□□ -1.02
LINC00544-201ENST00000400540 FCGR1BQ92637 280 aa8.66□□□□□ -1.02
LINC00544-201ENST00000400540 VCX3BQ9H321 246 aa8.66□□□□□ -1.02
LINC00544-201ENST00000400540 VSIRQ9H7M9 311 aa8.66□□□□□ -1.02
LINC00544-201ENST00000400540 RAB26Q9ULW5 256 aa8.66□□□□□ -1.02
LINC00544-201ENST00000400540 DNASE2O00115 360 aaPredicted RBP8.65□□□□□ -1.02
LINC00544-201ENST00000400540 EIF4EP06730 217 aaKnown RBP8.65□□□□□ -1.02
LINC00544-201ENST00000400540 C4BPBP20851 252 aa8.65□□□□□ -1.02
LINC00544-201ENST00000400540 TCTAP57738 103 aa8.65□□□□□ -1.02
LINC00544-201ENST00000400540 PAFAH1B2P68402 229 aa8.65□□□□□ -1.02
LINC00544-201ENST00000400540 PRCDQ00LT1 54 aa8.65□□□□□ -1.02
LINC00544-201ENST00000400540 Q6ZTC4 211 aa8.65□□□□□ -1.02
LINC00544-201ENST00000400540 CMTM1Q8IZ96 169 aa8.65□□□□□ -1.02
LINC00544-201ENST00000400540 ZNF114Q8NC26 417 aa8.65□□□□□ -1.02
LINC00544-201ENST00000400540 OR5H2Q8NGV7 314 aa8.65□□□□□ -1.02
LINC00544-201ENST00000400540 SEC22AQ96IW7 307 aa8.65□□□□□ -1.02
LINC00544-201ENST00000400540 TXN2Q99757 166 aa8.65□□□□□ -1.02
LINC00544-201ENST00000400540 FKBP11Q9NYL4 201 aa8.65□□□□□ -1.02
LINC00544-201ENST00000400540 PUS1Q9Y606 427 aaKnown RBP eCLIP8.65□□□□□ -1.02
LINC00544-201ENST00000400540 HSPG2P98160 4391 aa8.64□□□□□ -1.03
LINC00544-201ENST00000400540 IGHV4-4A0A075B6R2 117 aa8.64□□□□□ -1.03
LINC00544-201ENST00000400540 ELOA3CA0A087WX78 387 aaPredicted RBP8.64□□□□□ -1.03
LINC00544-201ENST00000400540 A0A1B0GU03 582 aa8.64□□□□□ -1.03
LINC00544-201ENST00000400540 C11orf94C9JXX5 98 aa8.64□□□□□ -1.03
LINC00544-201ENST00000400540 HLA-DMBP28068 263 aa8.64□□□□□ -1.03
LINC00544-201ENST00000400540 HRH1P35367 487 aa8.64□□□□□ -1.03
LINC00544-201ENST00000400540 TAS2R20P59543 309 aa8.64□□□□□ -1.03
LINC00544-201ENST00000400540 RPL11P62913 178 aaKnown RBP8.64□□□□□ -1.03
LINC00544-201ENST00000400540 IZUMO4Q1ZYL8 232 aa8.64□□□□□ -1.03
LINC00544-201ENST00000400540 TBC1D26Q86UD7 250 aa8.64□□□□□ -1.03
LINC00544-201ENST00000400540 STHQ8IWL8 128 aa8.64□□□□□ -1.03
LINC00544-201ENST00000400540 OR4A16Q8NH70 328 aa8.64□□□□□ -1.03
LINC00544-201ENST00000400540 MRGPRFQ96AM1 343 aa8.64□□□□□ -1.03
LINC00544-201ENST00000400540 TSC22D3Q99576 134 aa8.64□□□□□ -1.03
LINC00544-201ENST00000400540 GINS3Q9BRX5 216 aa8.64□□□□□ -1.03
LINC00544-201ENST00000400540 RABAC1Q9UI14 185 aa8.64□□□□□ -1.03
LINC00544-201ENST00000400540 A0A1B0GVY2 172 aa8.63□□□□□ -1.03
LINC00544-201ENST00000400540 KNCNA6PVL3 124 aa8.63□□□□□ -1.03
LINC00544-201ENST00000400540 NAT1P18440 290 aa8.63□□□□□ -1.03
LINC00544-201ENST00000400540 HLA-DMAP28067 261 aa8.63□□□□□ -1.03
LINC00544-201ENST00000400540 TAS2R46P59540 309 aa8.63□□□□□ -1.03
LINC00544-201ENST00000400540 TMEM69Q5SWH9 247 aa8.63□□□□□ -1.03
LINC00544-201ENST00000400540 ZNF600Q6ZNG1 722 aa8.63□□□□□ -1.03
LINC00544-201ENST00000400540 ZNF767PQ75MW2 155 aa8.63□□□□□ -1.03
LINC00544-201ENST00000400540 H2BFWTQ7Z2G1 175 aa8.63□□□□□ -1.03
LINC00544-201ENST00000400540 TRPT1Q86TN4 253 aaKnown RBP8.63□□□□□ -1.03
LINC00544-201ENST00000400540 LYSMD2Q8IV50 215 aa8.63□□□□□ -1.03
LINC00544-201ENST00000400540 HRH4Q9H3N8 390 aa8.63□□□□□ -1.03
LINC00544-201ENST00000400540 CLEC5AQ9NY25 188 aa8.63□□□□□ -1.03
LINC00544-201ENST00000400540 MRPL36Q9P0J6 103 aaKnown RBP8.63□□□□□ -1.03
LINC00544-201ENST00000400540 CELA1Q9UNI1 258 aa8.63□□□□□ -1.03
LINC00544-201ENST00000400540 X6R8D5 127 aa8.63□□□□□ -1.03
LINC00544-201ENST00000400540 MUC4Q99102 2169 aa8.62□□□□□ -1.03
LINC00544-201ENST00000400540 TRAV2A0A0B4J234 112 aa8.62□□□□□ -1.03
LINC00544-201ENST00000400540 ZNF688P0C7X2 276 aa8.62□□□□□ -1.03
LINC00544-201ENST00000400540 NEDD8Q15843 81 aa8.62□□□□□ -1.03
LINC00544-201ENST00000400540 UBE2NLQ5JXB2 153 aa8.62□□□□□ -1.03
LINC00544-201ENST00000400540 STXBP6Q8NFX7 210 aa8.62□□□□□ -1.03
LINC00544-201ENST00000400540 OR6F1Q8NGZ6 308 aa8.62□□□□□ -1.03
LINC00544-201ENST00000400540 S100A16Q96FQ6 103 aaKnown RBP8.62□□□□□ -1.03
LINC00544-201ENST00000400540 SCRT1Q9BWW7 348 aa8.62□□□□□ -1.03
LINC00544-201ENST00000400540 TRAV10A0A0B4J240 114 aa8.61□□□□□ -1.03
LINC00544-201ENST00000400540 ZNF705EA8MWA4 302 aaPredicted RBP8.61□□□□□ -1.03
LINC00544-201ENST00000400540 K7EQG2 157 aa8.61□□□□□ -1.03
LINC00544-201ENST00000400540 TMEM50AO95807 157 aa8.61□□□□□ -1.03
LINC00544-201ENST00000400540 CD5P06127 495 aa8.61□□□□□ -1.03
LINC00544-201ENST00000400540 MIFP14174 115 aa8.61□□□□□ -1.03
LINC00544-201ENST00000400540 NPBWR1P48145 328 aa8.61□□□□□ -1.03
LINC00544-201ENST00000400540 PPP5CP53041 499 aa8.61□□□□□ -1.03
LINC00544-201ENST00000400540 HSPE1P61604 102 aaKnown RBP8.61□□□□□ -1.03
LINC00544-201ENST00000400540 ERHP84090 104 aaKnown RBP8.61□□□□□ -1.03
LINC00544-201ENST00000400540 SAMD12Q8N8I0 201 aa8.61□□□□□ -1.03
LINC00544-201ENST00000400540 DUSP18Q8NEJ0 188 aa8.61□□□□□ -1.03
LINC00544-201ENST00000400540 FAM212BQ9NTI7 297 aaPredicted RBP8.61□□□□□ -1.03
LINC00544-201ENST00000400540 IGKV1-5P01602 117 aa8.6□□□□□ -1.03
LINC00544-201ENST00000400540 SPP1P10451 314 aa8.6□□□□□ -1.03
LINC00544-201ENST00000400540 PRSS3P35030 304 aa8.6□□□□□ -1.03
LINC00544-201ENST00000400540 P2RY1P47900 373 aa8.6□□□□□ -1.03
LINC00544-201ENST00000400540 TSPAN5P62079 268 aa8.6□□□□□ -1.03
LINC00544-201ENST00000400540 ACTL10Q5JWF8 245 aa8.6□□□□□ -1.03
LINC00544-201ENST00000400540 LINC00336Q6ZUF6 198 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms