RNA–Protein interactions for RNA: ENST00000399644.5

CACNA1C-218, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-218ENST00000399644 FAM90A14PP0C7W9 464 aa9.38□□□□□ -0.91
CACNA1C-218ENST00000399644 PRR4Q16378 134 aa9.38□□□□□ -0.91
CACNA1C-218ENST00000399644 CLPSL2Q6UWE3 100 aa9.38□□□□□ -0.91
CACNA1C-218ENST00000399644 CYP2G1PQ6ZSU1 146 aa9.38□□□□□ -0.91
CACNA1C-218ENST00000399644 RCHY1Q96PM5 261 aa9.38□□□□□ -0.91
CACNA1C-218ENST00000399644 TIMM17AQ99595 171 aa9.38□□□□□ -0.91
CACNA1C-218ENST00000399644 MRM2Q9UI43 246 aaKnown RBP9.38□□□□□ -0.91
CACNA1C-218ENST00000399644 SEC61GP60059 68 aa9.38□□□□□ -0.91
CACNA1C-218ENST00000399644 LAMA4Q16363 1823 aa9.38□□□□□ -0.91
CACNA1C-218ENST00000399644 NBL1P41271 181 aa9.38□□□□□ -0.91
CACNA1C-218ENST00000399644 PSMG4Q5JS54 123 aa9.38□□□□□ -0.91
CACNA1C-218ENST00000399644 ABHD1Q96SE0 405 aa9.38□□□□□ -0.91
CACNA1C-218ENST00000399644 ST6GALNAC2Q9UJ37 374 aa9.38□□□□□ -0.91
CACNA1C-218ENST00000399644 ERVH48-1M5A8F1 160 aa9.37□□□□□ -0.91
CACNA1C-218ENST00000399644 IL6RP08887 468 aaPredicted RBP9.37□□□□□ -0.91
CACNA1C-218ENST00000399644 PFN2P35080 140 aa9.37□□□□□ -0.91
CACNA1C-218ENST00000399644 TAF15Q92804 592 aaKnown RBP eCLIP9.37□□□□□ -0.91
CACNA1C-218ENST00000399644 ZIC1Q15915 447 aa9.37□□□□□ -0.91
CACNA1C-218ENST00000399644 MORN3Q6PF18 240 aaPredicted RBP9.37□□□□□ -0.91
CACNA1C-218ENST00000399644 KLF14Q8TD94 323 aaPredicted RBP9.37□□□□□ -0.91
CACNA1C-218ENST00000399644 RPRMQ9NS64 109 aa9.37□□□□□ -0.91
CACNA1C-218ENST00000399644 MYOD1P15172 320 aa9.37□□□□□ -0.91
CACNA1C-218ENST00000399644 MPLKIPQ8TAP9 179 aa9.37□□□□□ -0.91
CACNA1C-218ENST00000399644 RNF223E7ERA6 249 aa9.37□□□□□ -0.91
CACNA1C-218ENST00000399644 MMP23AO75900 390 aa9.37□□□□□ -0.91
CACNA1C-218ENST00000399644 EGR2P11161 476 aaPredicted RBP9.37□□□□□ -0.91
CACNA1C-218ENST00000399644 TCF15Q12870 199 aa9.37□□□□□ -0.91
CACNA1C-218ENST00000399644 RNF183Q96D59 192 aa9.37□□□□□ -0.91
CACNA1C-218ENST00000399644 ATG2BQ96BY7 2078 aa9.37□□□□□ -0.91
CACNA1C-218ENST00000399644 NXPH4O95158 308 aa9.37□□□□□ -0.91
CACNA1C-218ENST00000399644 DEFB130BP0DP73 79 aa9.37□□□□□ -0.91
CACNA1C-218ENST00000399644 DEFB130AP0DP74 79 aa9.37□□□□□ -0.91
CACNA1C-218ENST00000399644 TFF3Q07654 80 aa9.37□□□□□ -0.91
CACNA1C-218ENST00000399644 CACNG8Q8WXS5 425 aa9.37□□□□□ -0.91
CACNA1C-218ENST00000399644 C10orf35Q96D05 121 aa9.37□□□□□ -0.91
CACNA1C-218ENST00000399644 C1orf159Q96HA4 380 aa9.37□□□□□ -0.91
CACNA1C-218ENST00000399644 ASCL2Q99929 193 aa9.37□□□□□ -0.91
CACNA1C-218ENST00000399644 SIGLEC7Q9Y286 467 aa9.37□□□□□ -0.91
CACNA1C-218ENST00000399644 TCRBV5S2A0A599 114 aa9.36□□□□□ -0.91
CACNA1C-218ENST00000399644 GCHFRP30047 84 aa9.36□□□□□ -0.91
CACNA1C-218ENST00000399644 PSG4Q00888 419 aa9.36□□□□□ -0.91
CACNA1C-218ENST00000399644 ZNF638Q14966 1978 aaKnown RBP9.36□□□□□ -0.91
CACNA1C-218ENST00000399644 SRSF1Q07955 248 aaKnown RBP eCLIP9.36□□□□□ -0.91
CACNA1C-218ENST00000399644 MPV17L2Q567V2 206 aa9.36□□□□□ -0.91
CACNA1C-218ENST00000399644 NRTNQ99748 197 aa9.36□□□□□ -0.91
CACNA1C-218ENST00000399644 SMIM2Q9BVW6 85 aa9.36□□□□□ -0.91
CACNA1C-218ENST00000399644 PLAC1Q9HBJ0 212 aa9.36□□□□□ -0.91
CACNA1C-218ENST00000399644 DPM3Q9P2X0 92 aa9.36□□□□□ -0.91
CACNA1C-218ENST00000399644 ZNF561-AS1K7EIQ3 104 aa9.36□□□□□ -0.91
CACNA1C-218ENST00000399644 EFEMP2O95967 443 aa9.36□□□□□ -0.91
CACNA1C-218ENST00000399644 ID3Q02535 119 aa9.36□□□□□ -0.91
CACNA1C-218ENST00000399644 ERCC8Q13216 396 aa9.36□□□□□ -0.91
CACNA1C-218ENST00000399644 ZIC4Q8N9L1 334 aa9.36□□□□□ -0.91
CACNA1C-218ENST00000399644 HMSDA8MTL9 139 aa9.36□□□□□ -0.91
CACNA1C-218ENST00000399644 TMEM158Q8WZ71 300 aa9.36□□□□□ -0.91
CACNA1C-218ENST00000399644 RNASE7Q9H1E1 156 aaKnown RBP9.36□□□□□ -0.91
CACNA1C-218ENST00000399644 Q9H3A6 140 aa9.36□□□□□ -0.91
CACNA1C-218ENST00000399644 SHANK3Q9BYB0 1731 aa9.36□□□□□ -0.91
CACNA1C-218ENST00000399644 NHSL1Q5SYE7 1610 aa9.36□□□□□ -0.91
CACNA1C-218ENST00000399644 PAX1P15863 534 aa9.36□□□□□ -0.91
CACNA1C-218ENST00000399644 MYO18AQ92614 2054 aaKnown RBP9.35□□□□□ -0.91
CACNA1C-218ENST00000399644 TAF1P21675 1872 aa9.35□□□□□ -0.91
CACNA1C-218ENST00000399644 B4DSR2 109 aa9.35□□□□□ -0.91
CACNA1C-218ENST00000399644 CA11O75493 328 aa9.35□□□□□ -0.91
CACNA1C-218ENST00000399644 IGFBP2P18065 325 aa9.35□□□□□ -0.91
CACNA1C-218ENST00000399644 C9JAW5 83 aa9.35□□□□□ -0.91
CACNA1C-218ENST00000399644 FAM201AQ5SY85 155 aa9.35□□□□□ -0.91
CACNA1C-218ENST00000399644 TTC3P53804 2025 aa9.35□□□□□ -0.91
CACNA1C-218ENST00000399644 FOXS1O43638 330 aa9.35□□□□□ -0.91
CACNA1C-218ENST00000399644 FGF9P31371 208 aaPredicted RBP9.35□□□□□ -0.91
CACNA1C-218ENST00000399644 SPXQ9BT56 116 aa9.35□□□□□ -0.91
CACNA1C-218ENST00000399644 PGLYRP1O75594 196 aaPredicted RBP9.35□□□□□ -0.91
CACNA1C-218ENST00000399644 UBE2BP63146 152 aa9.35□□□□□ -0.91
CACNA1C-218ENST00000399644 SCARF2Q96GP6 870 aaPredicted RBP9.35□□□□□ -0.91
CACNA1C-218ENST00000399644 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.35□□□□□ -0.91
CACNA1C-218ENST00000399644 CMC4P56277 68 aaPredicted RBP9.35□□□□□ -0.91
CACNA1C-218ENST00000399644 SERF2P84101 59 aa9.35□□□□□ -0.91
CACNA1C-218ENST00000399644 Q6ZT83 130 aa9.35□□□□□ -0.91
CACNA1C-218ENST00000399644 NUP205Q92621 2012 aa9.34□□□□□ -0.91
CACNA1C-218ENST00000399644 PLPP2O43688 288 aa9.34□□□□□ -0.91
CACNA1C-218ENST00000399644 RPL34P49207 117 aaKnown RBP9.34□□□□□ -0.91
CACNA1C-218ENST00000399644 ATP5L2Q7Z4Y8 100 aa9.34□□□□□ -0.91
CACNA1C-218ENST00000399644 FGFRL1Q8N441 504 aa9.34□□□□□ -0.91
CACNA1C-218ENST00000399644 RIPPLY2Q5TAB7 128 aa9.34□□□□□ -0.91
CACNA1C-218ENST00000399644 C9orf62Q8N4C0 152 aa9.34□□□□□ -0.91
CACNA1C-218ENST00000399644 LINC01356Q8N9X3 169 aa9.34□□□□□ -0.91
CACNA1C-218ENST00000399644 OSR1Q8TAX0 266 aaPredicted RBP9.34□□□□□ -0.91
CACNA1C-218ENST00000399644 ACTL10Q5JWF8 245 aa9.34□□□□□ -0.91
CACNA1C-218ENST00000399644 PILRAQ9UKJ1 303 aa9.34□□□□□ -0.91
CACNA1C-218ENST00000399644 ARPC1AQ92747 370 aa9.34□□□□□ -0.91
CACNA1C-218ENST00000399644 GAGE7O76087 117 aa9.34□□□□□ -0.91
CACNA1C-218ENST00000399644 GAGE12FP0CL80 117 aa9.34□□□□□ -0.91
CACNA1C-218ENST00000399644 GAGE12GP0CL81 117 aa9.34□□□□□ -0.91
CACNA1C-218ENST00000399644 GAGE12IP0CL82 117 aa9.34□□□□□ -0.91
CACNA1C-218ENST00000399644 SLC25A16P16260 332 aa9.33□□□□□ -0.92
CACNA1C-218ENST00000399644 GLIPR1P48060 266 aa9.33□□□□□ -0.92
CACNA1C-218ENST00000399644 ATG4DQ86TL0 474 aaPredicted RBP9.33□□□□□ -0.92
CACNA1C-218ENST00000399644 BOD1L2Q8IYS8 172 aa9.33□□□□□ -0.92
CACNA1C-218ENST00000399644 CDK5RAP2Q96SN8 1893 aa9.33□□□□□ -0.92
CACNA1C-218ENST00000399644 HIGD1CA8MV81 97 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms