RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 FAM90A9PA6NNJ1 464 aa9.38□□□□□ -0.91
CACNA1C-217ENST00000399641 FAM90A22PA8MWA6 464 aa9.38□□□□□ -0.91
CACNA1C-217ENST00000399641 FAM90A12PA8MX19 464 aa9.38□□□□□ -0.91
CACNA1C-217ENST00000399641 FAM90A5PA8MXJ8 464 aa9.38□□□□□ -0.91
CACNA1C-217ENST00000399641 FAM90A23PA8MXZ1 464 aa9.38□□□□□ -0.91
CACNA1C-217ENST00000399641 FAM90A15PP0C7V4 464 aa9.38□□□□□ -0.91
CACNA1C-217ENST00000399641 FAM90A14PP0C7W9 464 aa9.38□□□□□ -0.91
CACNA1C-217ENST00000399641 PRR4Q16378 134 aa9.38□□□□□ -0.91
CACNA1C-217ENST00000399641 CLPSL2Q6UWE3 100 aa9.38□□□□□ -0.91
CACNA1C-217ENST00000399641 CYP2G1PQ6ZSU1 146 aa9.38□□□□□ -0.91
CACNA1C-217ENST00000399641 RCHY1Q96PM5 261 aa9.38□□□□□ -0.91
CACNA1C-217ENST00000399641 TIMM17AQ99595 171 aa9.38□□□□□ -0.91
CACNA1C-217ENST00000399641 MRM2Q9UI43 246 aaKnown RBP9.38□□□□□ -0.91
CACNA1C-217ENST00000399641 SEC61GP60059 68 aa9.38□□□□□ -0.91
CACNA1C-217ENST00000399641 NBL1P41271 181 aa9.38□□□□□ -0.91
CACNA1C-217ENST00000399641 PSMG4Q5JS54 123 aa9.38□□□□□ -0.91
CACNA1C-217ENST00000399641 ABHD1Q96SE0 405 aa9.38□□□□□ -0.91
CACNA1C-217ENST00000399641 ST6GALNAC2Q9UJ37 374 aa9.38□□□□□ -0.91
CACNA1C-217ENST00000399641 ERVH48-1M5A8F1 160 aa9.37□□□□□ -0.91
CACNA1C-217ENST00000399641 IL6RP08887 468 aaPredicted RBP9.37□□□□□ -0.91
CACNA1C-217ENST00000399641 PFN2P35080 140 aa9.37□□□□□ -0.91
CACNA1C-217ENST00000399641 TAF15Q92804 592 aaKnown RBP eCLIP9.37□□□□□ -0.91
CACNA1C-217ENST00000399641 ZIC1Q15915 447 aa9.37□□□□□ -0.91
CACNA1C-217ENST00000399641 MORN3Q6PF18 240 aaPredicted RBP9.37□□□□□ -0.91
CACNA1C-217ENST00000399641 KLF14Q8TD94 323 aaPredicted RBP9.37□□□□□ -0.91
CACNA1C-217ENST00000399641 RPRMQ9NS64 109 aa9.37□□□□□ -0.91
CACNA1C-217ENST00000399641 A0A1B0GUL6 1792 aa9.37□□□□□ -0.91
CACNA1C-217ENST00000399641 MYOD1P15172 320 aa9.37□□□□□ -0.91
CACNA1C-217ENST00000399641 MPLKIPQ8TAP9 179 aa9.37□□□□□ -0.91
CACNA1C-217ENST00000399641 SLIRPQ9GZT3 109 aaKnown RBP9.37□□□□□ -0.91
CACNA1C-217ENST00000399641 RNF223E7ERA6 249 aa9.37□□□□□ -0.91
CACNA1C-217ENST00000399641 MMP23AO75900 390 aa9.37□□□□□ -0.91
CACNA1C-217ENST00000399641 EGR2P11161 476 aaPredicted RBP9.37□□□□□ -0.91
CACNA1C-217ENST00000399641 TCF15Q12870 199 aa9.37□□□□□ -0.91
CACNA1C-217ENST00000399641 RNF183Q96D59 192 aa9.37□□□□□ -0.91
CACNA1C-217ENST00000399641 ATG2BQ96BY7 2078 aa9.37□□□□□ -0.91
CACNA1C-217ENST00000399641 NXPH4O95158 308 aa9.37□□□□□ -0.91
CACNA1C-217ENST00000399641 DEFB130BP0DP73 79 aa9.37□□□□□ -0.91
CACNA1C-217ENST00000399641 DEFB130AP0DP74 79 aa9.37□□□□□ -0.91
CACNA1C-217ENST00000399641 TFF3Q07654 80 aa9.37□□□□□ -0.91
CACNA1C-217ENST00000399641 CACNG8Q8WXS5 425 aa9.37□□□□□ -0.91
CACNA1C-217ENST00000399641 C10orf35Q96D05 121 aa9.37□□□□□ -0.91
CACNA1C-217ENST00000399641 C1orf159Q96HA4 380 aa9.37□□□□□ -0.91
CACNA1C-217ENST00000399641 ASCL2Q99929 193 aa9.37□□□□□ -0.91
CACNA1C-217ENST00000399641 SIGLEC7Q9Y286 467 aa9.37□□□□□ -0.91
CACNA1C-217ENST00000399641 GCHFRP30047 84 aa9.36□□□□□ -0.91
CACNA1C-217ENST00000399641 PSG4Q00888 419 aa9.36□□□□□ -0.91
CACNA1C-217ENST00000399641 C1QTNF12Q5T7M4 302 aa9.36□□□□□ -0.91
CACNA1C-217ENST00000399641 ZNF638Q14966 1978 aaKnown RBP9.36□□□□□ -0.91
CACNA1C-217ENST00000399641 SRSF1Q07955 248 aaKnown RBP eCLIP9.36□□□□□ -0.91
CACNA1C-217ENST00000399641 MPV17L2Q567V2 206 aa9.36□□□□□ -0.91
CACNA1C-217ENST00000399641 NRTNQ99748 197 aa9.36□□□□□ -0.91
CACNA1C-217ENST00000399641 SMIM2Q9BVW6 85 aa9.36□□□□□ -0.91
CACNA1C-217ENST00000399641 PLAC1Q9HBJ0 212 aa9.36□□□□□ -0.91
CACNA1C-217ENST00000399641 DPM3Q9P2X0 92 aa9.36□□□□□ -0.91
CACNA1C-217ENST00000399641 ZNF561-AS1K7EIQ3 104 aa9.36□□□□□ -0.91
CACNA1C-217ENST00000399641 EFEMP2O95967 443 aa9.36□□□□□ -0.91
CACNA1C-217ENST00000399641 ID3Q02535 119 aa9.36□□□□□ -0.91
CACNA1C-217ENST00000399641 ERCC8Q13216 396 aa9.36□□□□□ -0.91
CACNA1C-217ENST00000399641 ZIC4Q8N9L1 334 aa9.36□□□□□ -0.91
CACNA1C-217ENST00000399641 HMSDA8MTL9 139 aa9.36□□□□□ -0.91
CACNA1C-217ENST00000399641 XAF1Q6GPH4 301 aa9.36□□□□□ -0.91
CACNA1C-217ENST00000399641 TMEM158Q8WZ71 300 aa9.36□□□□□ -0.91
CACNA1C-217ENST00000399641 RNASE7Q9H1E1 156 aaKnown RBP9.36□□□□□ -0.91
CACNA1C-217ENST00000399641 Q9H3A6 140 aa9.36□□□□□ -0.91
CACNA1C-217ENST00000399641 SHANK3Q9BYB0 1731 aa9.36□□□□□ -0.91
CACNA1C-217ENST00000399641 NHSL1Q5SYE7 1610 aa9.36□□□□□ -0.91
CACNA1C-217ENST00000399641 PAX1P15863 534 aa9.36□□□□□ -0.91
CACNA1C-217ENST00000399641 MYO18AQ92614 2054 aaKnown RBP9.35□□□□□ -0.91
CACNA1C-217ENST00000399641 TAF1P21675 1872 aa9.35□□□□□ -0.91
CACNA1C-217ENST00000399641 B4DSR2 109 aa9.35□□□□□ -0.91
CACNA1C-217ENST00000399641 CA11O75493 328 aa9.35□□□□□ -0.91
CACNA1C-217ENST00000399641 IGFBP2P18065 325 aa9.35□□□□□ -0.91
CACNA1C-217ENST00000399641 C9JAW5 83 aa9.35□□□□□ -0.91
CACNA1C-217ENST00000399641 FAM201AQ5SY85 155 aa9.35□□□□□ -0.91
CACNA1C-217ENST00000399641 TTC3P53804 2025 aa9.35□□□□□ -0.91
CACNA1C-217ENST00000399641 FOXS1O43638 330 aa9.35□□□□□ -0.91
CACNA1C-217ENST00000399641 FGF9P31371 208 aaPredicted RBP9.35□□□□□ -0.91
CACNA1C-217ENST00000399641 SPXQ9BT56 116 aa9.35□□□□□ -0.91
CACNA1C-217ENST00000399641 PGLYRP1O75594 196 aaPredicted RBP9.35□□□□□ -0.91
CACNA1C-217ENST00000399641 UBE2BP63146 152 aa9.35□□□□□ -0.91
CACNA1C-217ENST00000399641 SCARF2Q96GP6 870 aaPredicted RBP9.35□□□□□ -0.91
CACNA1C-217ENST00000399641 RREB1Q92766 1687 aa9.35□□□□□ -0.91
CACNA1C-217ENST00000399641 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.35□□□□□ -0.91
CACNA1C-217ENST00000399641 CMC4P56277 68 aaPredicted RBP9.35□□□□□ -0.91
CACNA1C-217ENST00000399641 SERF2P84101 59 aa9.35□□□□□ -0.91
CACNA1C-217ENST00000399641 Q6ZT83 130 aa9.35□□□□□ -0.91
CACNA1C-217ENST00000399641 NUP205Q92621 2012 aa9.34□□□□□ -0.91
CACNA1C-217ENST00000399641 PLPP2O43688 288 aa9.34□□□□□ -0.91
CACNA1C-217ENST00000399641 ATP5L2Q7Z4Y8 100 aa9.34□□□□□ -0.91
CACNA1C-217ENST00000399641 FGFRL1Q8N441 504 aa9.34□□□□□ -0.91
CACNA1C-217ENST00000399641 RIPPLY2Q5TAB7 128 aa9.34□□□□□ -0.91
CACNA1C-217ENST00000399641 C9orf62Q8N4C0 152 aa9.34□□□□□ -0.91
CACNA1C-217ENST00000399641 LINC01356Q8N9X3 169 aa9.34□□□□□ -0.91
CACNA1C-217ENST00000399641 OSR1Q8TAX0 266 aaPredicted RBP9.34□□□□□ -0.91
CACNA1C-217ENST00000399641 ACTL10Q5JWF8 245 aa9.34□□□□□ -0.91
CACNA1C-217ENST00000399641 PILRAQ9UKJ1 303 aa9.34□□□□□ -0.91
CACNA1C-217ENST00000399641 ARPC1AQ92747 370 aa9.34□□□□□ -0.91
CACNA1C-217ENST00000399641 GAGE7O76087 117 aa9.34□□□□□ -0.91
CACNA1C-217ENST00000399641 GAGE12FP0CL80 117 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms