RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 SIGLEC5O15389 551 aa9.32□□□□□ -0.92
CACNA1C-215ENST00000399637 CD24P25063 80 aa9.32□□□□□ -0.92
CACNA1C-215ENST00000399637 CMC4P56277 68 aaPredicted RBP9.32□□□□□ -0.92
CACNA1C-215ENST00000399637 BAALCQ8WXS3 180 aa9.32□□□□□ -0.92
CACNA1C-215ENST00000399637 SLC25A2Q9BXI2 301 aa9.32□□□□□ -0.92
CACNA1C-215ENST00000399637 PEF1Q9UBV8 284 aaKnown RBP9.32□□□□□ -0.92
CACNA1C-215ENST00000399637 SPCS1Q9Y6A9 102 aa9.32□□□□□ -0.92
CACNA1C-215ENST00000399637 B4DSR2 109 aa9.31□□□□□ -0.92
CACNA1C-215ENST00000399637 APOHP02749 345 aaPredicted RBP9.31□□□□□ -0.92
CACNA1C-215ENST00000399637 SRSF6Q13247 344 aaKnown RBP9.31□□□□□ -0.92
CACNA1C-215ENST00000399637 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.31□□□□□ -0.92
CACNA1C-215ENST00000399637 IFI27L2Q9H2X8 130 aa9.31□□□□□ -0.92
CACNA1C-215ENST00000399637 Q5BKY6 102 aa9.31□□□□□ -0.92
CACNA1C-215ENST00000399637 ZNRF1Q8ND25 227 aa9.31□□□□□ -0.92
CACNA1C-215ENST00000399637 NPDC1Q9NQX5 325 aaPredicted RBP9.31□□□□□ -0.92
CACNA1C-215ENST00000399637 PRRC2BQ5JSZ5 2229 aaKnown RBP9.31□□□□□ -0.92
CACNA1C-215ENST00000399637 GRIFINA4D1Z8 144 aa9.31□□□□□ -0.92
CACNA1C-215ENST00000399637 RND3P61587 244 aa9.31□□□□□ -0.92
CACNA1C-215ENST00000399637 PRTN3P24158 256 aa9.31□□□□□ -0.92
CACNA1C-215ENST00000399637 TRBV5-7A0A0A0MS05 114 aa9.31□□□□□ -0.92
CACNA1C-215ENST00000399637 IFI6P09912 130 aa9.31□□□□□ -0.92
CACNA1C-215ENST00000399637 TMEM219Q86XT9 240 aa9.31□□□□□ -0.92
CACNA1C-215ENST00000399637 TIAF1O95411 115 aa9.3□□□□□ -0.92
CACNA1C-215ENST00000399637 C1orf100Q5SVJ3 147 aa9.3□□□□□ -0.92
CACNA1C-215ENST00000399637 ZP1P60852 638 aa9.3□□□□□ -0.92
CACNA1C-215ENST00000399637 GATAD1Q8WUU5 269 aa9.3□□□□□ -0.92
CACNA1C-215ENST00000399637 ORAOV1Q8WV07 137 aa9.3□□□□□ -0.92
CACNA1C-215ENST00000399637 AMELYQ99218 206 aa9.3□□□□□ -0.92
CACNA1C-215ENST00000399637 ZFC3H1O60293 1989 aaKnown RBP9.3□□□□□ -0.92
CACNA1C-215ENST00000399637 SPAG17Q6Q759 2223 aa9.3□□□□□ -0.92
CACNA1C-215ENST00000399637 UCP3P55916 312 aa9.3□□□□□ -0.92
CACNA1C-215ENST00000399637 RIPPLY2Q5TAB7 128 aa9.3□□□□□ -0.92
CACNA1C-215ENST00000399637 ZNF660Q6AZW8 331 aaPredicted RBP9.3□□□□□ -0.92
CACNA1C-215ENST00000399637 C21orf62Q9NYP8 219 aa9.3□□□□□ -0.92
CACNA1C-215ENST00000399637 VWC2LB2RUY7 222 aa9.3□□□□□ -0.92
CACNA1C-215ENST00000399637 VENTXO95231 258 aa9.3□□□□□ -0.92
CACNA1C-215ENST00000399637 CARHSP1Q9Y2V2 147 aaKnown RBP9.3□□□□□ -0.92
CACNA1C-215ENST00000399637 STRCP1A6NGW2 1772 aa9.3□□□□□ -0.92
CACNA1C-215ENST00000399637 A0A1B0GW15 77 aa9.3□□□□□ -0.92
CACNA1C-215ENST00000399637 CD7P09564 240 aa9.3□□□□□ -0.92
CACNA1C-215ENST00000399637 CA7P43166 264 aa9.3□□□□□ -0.92
CACNA1C-215ENST00000399637 RNF166Q96A37 237 aaPredicted RBP9.3□□□□□ -0.92
CACNA1C-215ENST00000399637 RPP21Q9H633 154 aaKnown RBP9.3□□□□□ -0.92
CACNA1C-215ENST00000399637 IGKV1-8A0A0C4DH67 115 aa9.29□□□□□ -0.92
CACNA1C-215ENST00000399637 OSR1Q8TAX0 266 aaPredicted RBP9.29□□□□□ -0.92
CACNA1C-215ENST00000399637 DLX4Q92988 240 aaPredicted RBP9.29□□□□□ -0.92
CACNA1C-215ENST00000399637 FXYD7P58549 80 aa9.29□□□□□ -0.92
CACNA1C-215ENST00000399637 C9orf106Q8NAJ2 232 aa9.29□□□□□ -0.92
CACNA1C-215ENST00000399637 ZNF600Q6ZNG1 722 aa9.29□□□□□ -0.92
CACNA1C-215ENST00000399637 LRTM2Q8N967 370 aa9.29□□□□□ -0.92
CACNA1C-215ENST00000399637 FER1L6-AS1Q8NA97 138 aa9.29□□□□□ -0.92
CACNA1C-215ENST00000399637 C5orf66Q9H5L9 145 aa9.29□□□□□ -0.92
CACNA1C-215ENST00000399637 FNDC4Q9H6D8 234 aaPredicted RBP9.29□□□□□ -0.92
CACNA1C-215ENST00000399637 IL36BQ9NZH7 164 aa9.29□□□□□ -0.92
CACNA1C-215ENST00000399637 TRPM6Q9BX84 2022 aa9.29□□□□□ -0.92
CACNA1C-215ENST00000399637 TOMM40O96008 361 aa9.29□□□□□ -0.92
CACNA1C-215ENST00000399637 NBEAP1P0C6P0 100 aa9.29□□□□□ -0.92
CACNA1C-215ENST00000399637 CECR9P0C854 216 aa9.29□□□□□ -0.92
CACNA1C-215ENST00000399637 DANCRP0C864 163 aa9.29□□□□□ -0.92
CACNA1C-215ENST00000399637 ASPHD2Q6ICH7 369 aa9.29□□□□□ -0.92
CACNA1C-215ENST00000399637 POC1AQ8NBT0 407 aa9.29□□□□□ -0.92
CACNA1C-215ENST00000399637 GGACTQ9BVM4 153 aa9.29□□□□□ -0.92
CACNA1C-215ENST00000399637 ST20Q9HBF5 79 aa9.29□□□□□ -0.92
CACNA1C-215ENST00000399637 DMRT1Q9Y5R6 373 aa9.29□□□□□ -0.92
CACNA1C-215ENST00000399637 SBF2Q86WG5 1849 aa9.29□□□□□ -0.92
CACNA1C-215ENST00000399637 GPX4P36969 197 aaPredicted RBP9.29□□□□□ -0.92
CACNA1C-215ENST00000399637 BRD3OSQ6XYD6 125 aa9.29□□□□□ -0.92
CACNA1C-215ENST00000399637 KCNS1Q96KK3 526 aa9.29□□□□□ -0.92
CACNA1C-215ENST00000399637 NPCDR1Q9BY65 106 aa9.29□□□□□ -0.92
CACNA1C-215ENST00000399637 MEGF9Q9H1U4 602 aa9.29□□□□□ -0.92
CACNA1C-215ENST00000399637 LSM4Q9Y4Z0 139 aaKnown RBP9.29□□□□□ -0.92
CACNA1C-215ENST00000399637 IGHV3-53P01767 116 aa9.28□□□□□ -0.92
CACNA1C-215ENST00000399637 TPTE2P1Q5T6R2 138 aa9.28□□□□□ -0.92
CACNA1C-215ENST00000399637 SCN9AQ15858 1988 aa9.28□□□□□ -0.92
CACNA1C-215ENST00000399637 H3BMM0 161 aa9.28□□□□□ -0.92
CACNA1C-215ENST00000399637 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.28□□□□□ -0.92
CACNA1C-215ENST00000399637 GCM2O75603 506 aaPredicted RBP9.28□□□□□ -0.92
CACNA1C-215ENST00000399637 CRYBA2P53672 197 aa9.28□□□□□ -0.92
CACNA1C-215ENST00000399637 UBE2WQ96B02 151 aa9.28□□□□□ -0.92
CACNA1C-215ENST00000399637 ADARB2-AS1A8MUL3 147 aa9.28□□□□□ -0.92
CACNA1C-215ENST00000399637 CHKB-CPT1BH3BT56 60 aa9.28□□□□□ -0.92
CACNA1C-215ENST00000399637 IL17RELQ6ZVW7 336 aa9.28□□□□□ -0.92
CACNA1C-215ENST00000399637 ASCC3Q8N3C0 2202 aaKnown RBP9.28□□□□□ -0.92
CACNA1C-215ENST00000399637 RGPD3A6NKT7 1758 aaPredicted RBP9.28□□□□□ -0.92
CACNA1C-215ENST00000399637 PSPNO60542 156 aa9.28□□□□□ -0.92
CACNA1C-215ENST00000399637 IGFBP2P18065 325 aa9.28□□□□□ -0.92
CACNA1C-215ENST00000399637 DDTP30046 118 aa9.28□□□□□ -0.92
CACNA1C-215ENST00000399637 EFNA4P52798 201 aa9.28□□□□□ -0.92
CACNA1C-215ENST00000399637 C2orf68Q2NKX9 166 aa9.28□□□□□ -0.92
CACNA1C-215ENST00000399637 ZNF114Q8NC26 417 aa9.28□□□□□ -0.92
CACNA1C-215ENST00000399637 GTF3AQ92664 365 aaKnown RBP9.28□□□□□ -0.92
CACNA1C-215ENST00000399637 ANAPC10Q9UM13 185 aa9.28□□□□□ -0.92
CACNA1C-215ENST00000399637 DPRXA6NFQ7 191 aa9.28□□□□□ -0.92
CACNA1C-215ENST00000399637 DUSP14O95147 198 aaKnown RBP9.28□□□□□ -0.92
CACNA1C-215ENST00000399637 CGAP01215 116 aa9.28□□□□□ -0.92
CACNA1C-215ENST00000399637 SLC25A16P16260 332 aa9.28□□□□□ -0.92
CACNA1C-215ENST00000399637 NEUROG3Q9Y4Z2 214 aa9.28□□□□□ -0.92
CACNA1C-215ENST00000399637 TRIP12Q14669 1992 aaPredicted RBP9.28□□□□□ -0.92
CACNA1C-215ENST00000399637 PLXNB2O15031 1838 aa9.28□□□□□ -0.92
CACNA1C-215ENST00000399637 LHX2P50458 406 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms