RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 C8orf4Q9NR00 106 aa12.82□□□□□ -0.36
UFD1-202ENST00000399523 TMEM235A6NFC5 223 aa12.81□□□□□ -0.36
UFD1-202ENST00000399523 PDCD5O14737 125 aa12.81□□□□□ -0.36
UFD1-202ENST00000399523 MT-CO2P00403 227 aa12.81□□□□□ -0.36
UFD1-202ENST00000399523 PPYP01298 95 aa12.81□□□□□ -0.36
UFD1-202ENST00000399523 STXBP6Q8NFX7 210 aa12.81□□□□□ -0.36
UFD1-202ENST00000399523 OR51H1Q8NH63 302 aa12.81□□□□□ -0.36
UFD1-202ENST00000399523 DCANP1Q8TF63 244 aa12.81□□□□□ -0.36
UFD1-202ENST00000399523 MISP3Q96FF7 219 aa12.81□□□□□ -0.36
UFD1-202ENST00000399523 NEU1Q99519 415 aa12.81□□□□□ -0.36
UFD1-202ENST00000399523 C1QTNF4Q9BXJ3 329 aa12.81□□□□□ -0.36
UFD1-202ENST00000399523 SLC5A7Q9GZV3 580 aa12.81□□□□□ -0.36
UFD1-202ENST00000399523 ACOT13Q9NPJ3 140 aa12.81□□□□□ -0.36
UFD1-202ENST00000399523 NSG2Q9Y328 171 aa12.81□□□□□ -0.36
UFD1-202ENST00000399523 TRAV1-2A0A0B4J238 106 aa12.8□□□□□ -0.36
UFD1-202ENST00000399523 IGHV3-48P01763 117 aa12.8□□□□□ -0.36
UFD1-202ENST00000399523 HSMCR30P0CW71 290 aa12.8□□□□□ -0.36
UFD1-202ENST00000399523 ZNF818PQ6ZRF7 136 aa12.8□□□□□ -0.36
UFD1-202ENST00000399523 C6orf223Q8N319 242 aa12.8□□□□□ -0.36
UFD1-202ENST00000399523 RAB40CQ96S21 281 aa12.8□□□□□ -0.36
UFD1-202ENST00000399523 PUS1Q9Y606 427 aaKnown RBP eCLIP12.8□□□□□ -0.36
UFD1-202ENST00000399523 A0A1W2PS18 150 aa12.79□□□□□ -0.36
UFD1-202ENST00000399523 TMEM189A5PLL7 270 aa12.79□□□□□ -0.36
UFD1-202ENST00000399523 SNAPC5O75971 98 aa12.79□□□□□ -0.36
UFD1-202ENST00000399523 PTHLHP12272 177 aa12.79□□□□□ -0.36
UFD1-202ENST00000399523 GNG2P59768 71 aa12.79□□□□□ -0.36
UFD1-202ENST00000399523 ARPC4P59998 168 aa12.79□□□□□ -0.36
UFD1-202ENST00000399523 MLLT11Q13015 90 aaPredicted RBP12.79□□□□□ -0.36
UFD1-202ENST00000399523 AADACL3Q5VUY0 350 aa12.79□□□□□ -0.36
UFD1-202ENST00000399523 ZNF705AQ6ZN79 300 aaPredicted RBP12.79□□□□□ -0.36
UFD1-202ENST00000399523 ZNF600Q6ZNG1 722 aa12.79□□□□□ -0.36
UFD1-202ENST00000399523 XCL2Q9UBD3 114 aa12.79□□□□□ -0.36
UFD1-202ENST00000399523 PRNDQ9UKY0 176 aa12.79□□□□□ -0.36
UFD1-202ENST00000399523 SRRM2Q9UQ35 2752 aaKnown RBP12.79□□□□□ -0.36
UFD1-202ENST00000399523 A0A1B0GU03 582 aa12.78□□□□□ -0.36
UFD1-202ENST00000399523 NPPCP23582 126 aa12.78□□□□□ -0.36
UFD1-202ENST00000399523 FGF9P31371 208 aaPredicted RBP12.78□□□□□ -0.36
UFD1-202ENST00000399523 NUTF2P61970 127 aaKnown RBP12.78□□□□□ -0.36
UFD1-202ENST00000399523 ZNF114Q8NC26 417 aa12.78□□□□□ -0.36
UFD1-202ENST00000399523 CCDC90BQ9GZT6 254 aa12.78□□□□□ -0.36
UFD1-202ENST00000399523 FKBP11Q9NYL4 201 aa12.78□□□□□ -0.36
UFD1-202ENST00000399523 DKK2Q9UBU2 259 aa12.78□□□□□ -0.36
UFD1-202ENST00000399523 NBDYA0A0U1RRE5 68 aa12.77□□□□□ -0.37
UFD1-202ENST00000399523 SMIM9A6NGZ8 99 aa12.77□□□□□ -0.37
UFD1-202ENST00000399523 DBX1A6NMT0 343 aa12.77□□□□□ -0.37
UFD1-202ENST00000399523 ZNF705FA8MVS1 300 aaPredicted RBP12.77□□□□□ -0.37
UFD1-202ENST00000399523 KRASP01116 189 aa12.77□□□□□ -0.37
UFD1-202ENST00000399523 ZNF705DP0CH99 300 aaPredicted RBP12.77□□□□□ -0.37
UFD1-202ENST00000399523 ZNF705BP0CI00 300 aaPredicted RBP12.77□□□□□ -0.37
UFD1-202ENST00000399523 F2RP25116 425 aa12.77□□□□□ -0.37
UFD1-202ENST00000399523 EMP1P54849 157 aa12.77□□□□□ -0.37
UFD1-202ENST00000399523 OXA1LQ15070 435 aa12.77□□□□□ -0.37
UFD1-202ENST00000399523 SPATA12Q7Z6I5 190 aa12.77□□□□□ -0.37
UFD1-202ENST00000399523 BEST4Q8NFU0 473 aa12.77□□□□□ -0.37
UFD1-202ENST00000399523 NIPSNAP3BQ9BS92 247 aa12.77□□□□□ -0.37
UFD1-202ENST00000399523 MYCBP2O75592 4640 aa12.77□□□□□ -0.37
UFD1-202ENST00000399523 TEX48A0A1B0GUV7 120 aa12.76□□□□□ -0.37
UFD1-202ENST00000399523 EPM2AB3EWF7 344 aa12.76□□□□□ -0.37
UFD1-202ENST00000399523 CASQ2O14958 399 aaPredicted RBP12.76□□□□□ -0.37
UFD1-202ENST00000399523 CRYBB3P26998 211 aa12.76□□□□□ -0.37
UFD1-202ENST00000399523 P2RY1P47900 373 aa12.76□□□□□ -0.37
UFD1-202ENST00000399523 NPBWR1P48145 328 aa12.76□□□□□ -0.37
UFD1-202ENST00000399523 FXYD4P59646 89 aa12.76□□□□□ -0.37
UFD1-202ENST00000399523 FCAMRQ8WWV6 532 aa12.76□□□□□ -0.37
UFD1-202ENST00000399523 PINX1Q96BK5 328 aaKnown RBP12.76□□□□□ -0.37
UFD1-202ENST00000399523 MOB3AQ96BX8 217 aa12.76□□□□□ -0.37
UFD1-202ENST00000399523 YTHDF1Q9BYJ9 559 aaKnown RBP12.76□□□□□ -0.37
UFD1-202ENST00000399523 TMED3Q9Y3Q3 217 aa12.76□□□□□ -0.37
UFD1-202ENST00000399523 FLG2Q5D862 2391 aaPredicted RBP12.76□□□□□ -0.37
UFD1-202ENST00000399523 RAB3BP20337 219 aa12.75□□□□□ -0.37
UFD1-202ENST00000399523 GNRHRP30968 328 aa12.75□□□□□ -0.37
UFD1-202ENST00000399523 G6PCP35575 357 aa12.75□□□□□ -0.37
UFD1-202ENST00000399523 LPAR6P43657 344 aa12.75□□□□□ -0.37
UFD1-202ENST00000399523 FAT1Q14517 4588 aa12.75□□□□□ -0.37
UFD1-202ENST00000399523 KCTD21Q4G0X4 260 aa12.75□□□□□ -0.37
UFD1-202ENST00000399523 FAM222AQ5U5X8 452 aa12.75□□□□□ -0.37
UFD1-202ENST00000399523 TMEM88Q6PEY1 159 aa12.75□□□□□ -0.37
UFD1-202ENST00000399523 TPRA1Q86W33 373 aa12.75□□□□□ -0.37
UFD1-202ENST00000399523 SCN3BQ9NY72 215 aa12.75□□□□□ -0.37
UFD1-202ENST00000399523 SCGNO76038 276 aa12.74□□□□□ -0.37
UFD1-202ENST00000399523 TMEM50AO95807 157 aa12.74□□□□□ -0.37
UFD1-202ENST00000399523 INAFM2P0DMQ5 153 aa12.74□□□□□ -0.37
UFD1-202ENST00000399523 PSMG4Q5JS54 123 aa12.74□□□□□ -0.37
UFD1-202ENST00000399523 HOGA1Q86XE5 327 aa12.74□□□□□ -0.37
UFD1-202ENST00000399523 METTL26Q96S19 204 aa12.74□□□□□ -0.37
UFD1-202ENST00000399523 MGLLQ99685 303 aa12.74□□□□□ -0.37
UFD1-202ENST00000399523 HELTA6NFD8 242 aa12.73□□□□□ -0.37
UFD1-202ENST00000399523 H3BMM0 161 aa12.73□□□□□ -0.37
UFD1-202ENST00000399523 PGLYRP1O75594 196 aaPredicted RBP12.73□□□□□ -0.37
UFD1-202ENST00000399523 HTN3P15516 51 aa12.73□□□□□ -0.37
UFD1-202ENST00000399523 MYL9P24844 172 aa12.73□□□□□ -0.37
UFD1-202ENST00000399523 TMEM17Q86X19 198 aa12.73□□□□□ -0.37
UFD1-202ENST00000399523 C15orf53Q8NAA6 179 aa12.73□□□□□ -0.37
UFD1-202ENST00000399523 ZNRF2Q8NHG8 242 aa12.73□□□□□ -0.37
UFD1-202ENST00000399523 BORCS5Q969J3 196 aa12.73□□□□□ -0.37
UFD1-202ENST00000399523 TSC22D3Q99576 134 aa12.73□□□□□ -0.37
UFD1-202ENST00000399523 RFNGQ9Y644 331 aa12.73□□□□□ -0.37
UFD1-202ENST00000399523 RLN1P04808 185 aa12.72□□□□□ -0.37
UFD1-202ENST00000399523 DHRS2Q13268 280 aa12.72□□□□□ -0.37
UFD1-202ENST00000399523 DUSP21Q9H596 190 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms