RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 WDR83OSQ9Y284 106 aa12.21□□□□□ -0.46
RPRD1A-202ENST00000399022 NUP210Q8TEM1 1887 aaPredicted RBP12.2□□□□□ -0.46
RPRD1A-202ENST00000399022 COX7A1P24310 79 aa12.2□□□□□ -0.46
RPRD1A-202ENST00000399022 Q1RN00 199 aa12.2□□□□□ -0.46
RPRD1A-202ENST00000399022 PCDH15Q96QU1 1955 aa12.2□□□□□ -0.46
RPRD1A-202ENST00000399022 TDGF1P13385 188 aa12.2□□□□□ -0.46
RPRD1A-202ENST00000399022 THYN1Q9P016 225 aa12.2□□□□□ -0.46
RPRD1A-202ENST00000399022 HIGD1CA8MV81 97 aa12.2□□□□□ -0.46
RPRD1A-202ENST00000399022 MPV17P39210 176 aa12.2□□□□□ -0.46
RPRD1A-202ENST00000399022 SMAGPQ0VAQ4 97 aa12.2□□□□□ -0.46
RPRD1A-202ENST00000399022 PSG7Q13046 419 aa12.2□□□□□ -0.46
RPRD1A-202ENST00000399022 DCTN5Q9BTE1 182 aa12.2□□□□□ -0.46
RPRD1A-202ENST00000399022 IGHV1-69-2A0A0G2JMI3 117 aa12.19□□□□□ -0.46
RPRD1A-202ENST00000399022 SCGB1D4Q6XE38 83 aa12.19□□□□□ -0.46
RPRD1A-202ENST00000399022 A0A1W2PRD5 423 aa12.19□□□□□ -0.46
RPRD1A-202ENST00000399022 A0A1W2PRF3 423 aa12.19□□□□□ -0.46
RPRD1A-202ENST00000399022 A0A1W2PRM7 423 aa12.19□□□□□ -0.46
RPRD1A-202ENST00000399022 IGLC2P0DOY2 106 aa12.19□□□□□ -0.46
RPRD1A-202ENST00000399022 IGLC3P0DOY3 106 aa12.19□□□□□ -0.46
RPRD1A-202ENST00000399022 OR1L8Q8NGR8 309 aa12.19□□□□□ -0.46
RPRD1A-202ENST00000399022 GAGE12BA1L429 117 aa12.19□□□□□ -0.46
RPRD1A-202ENST00000399022 CST9LQ9H4G1 147 aa12.19□□□□□ -0.46
RPRD1A-202ENST00000399022 OSTCQ9NRP0 149 aa12.19□□□□□ -0.46
RPRD1A-202ENST00000399022 MGST3O14880 152 aa12.19□□□□□ -0.46
RPRD1A-202ENST00000399022 RBFOX2O43251 390 aaKnown RBP eCLIP12.19□□□□□ -0.46
RPRD1A-202ENST00000399022 PAX9P55771 341 aa12.19□□□□□ -0.46
RPRD1A-202ENST00000399022 OCIAD2Q56VL3 154 aa12.19□□□□□ -0.46
RPRD1A-202ENST00000399022 ZNRF1Q8ND25 227 aa12.19□□□□□ -0.46
RPRD1A-202ENST00000399022 OR2K2Q8NGT1 345 aa12.19□□□□□ -0.46
RPRD1A-202ENST00000399022 PLPPR1Q8TBJ4 325 aa12.19□□□□□ -0.46
RPRD1A-202ENST00000399022 PCSK4Q6UW60 755 aa12.18□□□□□ -0.46
RPRD1A-202ENST00000399022 H3BVH4 76 aa12.18□□□□□ -0.46
RPRD1A-202ENST00000399022 TMEM14EPQ6UXP3 125 aa12.18□□□□□ -0.46
RPRD1A-202ENST00000399022 hDV102S1A0JD36 115 aa12.18□□□□□ -0.46
RPRD1A-202ENST00000399022 TYMSP04818 313 aa12.18□□□□□ -0.46
RPRD1A-202ENST00000399022 SRSF9Q13242 221 aaKnown RBP eCLIP12.18□□□□□ -0.46
RPRD1A-202ENST00000399022 FAM201AQ5SY85 155 aa12.18□□□□□ -0.46
RPRD1A-202ENST00000399022 Q6ZT83 130 aa12.18□□□□□ -0.46
RPRD1A-202ENST00000399022 SRSF12Q8WXF0 261 aaKnown RBP12.18□□□□□ -0.46
RPRD1A-202ENST00000399022 TIMD4Q96H15 378 aa12.18□□□□□ -0.46
RPRD1A-202ENST00000399022 GRAMD2BQ96HH9 432 aa12.18□□□□□ -0.46
RPRD1A-202ENST00000399022 JKAMPQ9P055 326 aa12.18□□□□□ -0.46
RPRD1A-202ENST00000399022 TNXAQ16473 311 aa12.17□□□□□ -0.46
RPRD1A-202ENST00000399022 TDRG1Q3Y452 100 aa12.17□□□□□ -0.46
RPRD1A-202ENST00000399022 TMEM136Q6ZRR5 245 aa12.17□□□□□ -0.46
RPRD1A-202ENST00000399022 CLEC7AQ9BXN2 247 aa12.17□□□□□ -0.46
RPRD1A-202ENST00000399022 ALPK3Q96L96 1907 aa12.17□□□□□ -0.46
RPRD1A-202ENST00000399022 KIR2DL5BA0A0G2JN68 375 aa12.17□□□□□ -0.46
RPRD1A-202ENST00000399022 KIR2DL5BA0A0G2JPC4 375 aa12.17□□□□□ -0.46
RPRD1A-202ENST00000399022 CLEC3BP05452 202 aa12.17□□□□□ -0.46
RPRD1A-202ENST00000399022 CECR9P0C854 216 aa12.17□□□□□ -0.46
RPRD1A-202ENST00000399022 SMIM13P0DJ93 91 aa12.17□□□□□ -0.46
RPRD1A-202ENST00000399022 GFRA1P56159 465 aa12.17□□□□□ -0.46
RPRD1A-202ENST00000399022 KIR2DL5AQ8N109 375 aa12.17□□□□□ -0.46
RPRD1A-202ENST00000399022 TRAV24A0A0B4J272 114 aa12.17□□□□□ -0.46
RPRD1A-202ENST00000399022 LOC107984156A0A0G2JMH3 177 aa12.17□□□□□ -0.46
RPRD1A-202ENST00000399022 IGHV1-2P23083 117 aa12.17□□□□□ -0.46
RPRD1A-202ENST00000399022 COA6Q5JTJ3 125 aaKnown RBP12.17□□□□□ -0.46
RPRD1A-202ENST00000399022 ARL17AQ8IVW1 177 aa12.17□□□□□ -0.46
RPRD1A-202ENST00000399022 RNASE8Q8TDE3 154 aaKnown RBP12.17□□□□□ -0.46
RPRD1A-202ENST00000399022 ZNF106Q9H2Y7 1883 aaKnown RBP12.17□□□□□ -0.46
RPRD1A-202ENST00000399022 MUC21A0A0G2JKD1 596 aa12.17□□□□□ -0.46
RPRD1A-202ENST00000399022 MUC21A0A140T8X8 626 aa12.17□□□□□ -0.46
RPRD1A-202ENST00000399022 ZNF883P0CG24 379 aa12.17□□□□□ -0.46
RPRD1A-202ENST00000399022 STAG3L2P0CL84 134 aa12.17□□□□□ -0.46
RPRD1A-202ENST00000399022 STAG3L3P0CL85 134 aa12.17□□□□□ -0.46
RPRD1A-202ENST00000399022 CEACAM8P31997 349 aaPredicted RBP12.17□□□□□ -0.46
RPRD1A-202ENST00000399022 PRSS8Q16651 343 aa12.17□□□□□ -0.46
RPRD1A-202ENST00000399022 RPL39P5Q59GN2 51 aa12.17□□□□□ -0.46
RPRD1A-202ENST00000399022 MUC21Q5SSG8 566 aa12.17□□□□□ -0.46
RPRD1A-202ENST00000399022 TCF24Q7RTU0 167 aa12.17□□□□□ -0.46
RPRD1A-202ENST00000399022 A0A087X0K7 114 aa12.16□□□□□ -0.46
RPRD1A-202ENST00000399022 AHRRA9YTQ3 701 aa12.16□□□□□ -0.46
RPRD1A-202ENST00000399022 EFNB3Q15768 340 aa12.16□□□□□ -0.46
RPRD1A-202ENST00000399022 VSTM2AQ8TAG5 236 aa12.16□□□□□ -0.46
RPRD1A-202ENST00000399022 ST20Q9HBF5 79 aa12.16□□□□□ -0.46
RPRD1A-202ENST00000399022 LY6G6EA0A0G2JKS1 128 aa12.16□□□□□ -0.46
RPRD1A-202ENST00000399022 APOHP02749 345 aaPredicted RBP12.16□□□□□ -0.46
RPRD1A-202ENST00000399022 FAM222BQ8WU58 562 aa12.16□□□□□ -0.46
RPRD1A-202ENST00000399022 U3KQA8 63 aa12.16□□□□□ -0.46
RPRD1A-202ENST00000399022 FAM181BA6NEQ2 426 aa12.16□□□□□ -0.46
RPRD1A-202ENST00000399022 C16orf97H3BN30 126 aa12.16□□□□□ -0.46
RPRD1A-202ENST00000399022 IGKV1D-33P01593 117 aa12.16□□□□□ -0.46
RPRD1A-202ENST00000399022 IGKV1-33P01594 117 aa12.16□□□□□ -0.46
RPRD1A-202ENST00000399022 SFXN3Q9BWM7 321 aa12.16□□□□□ -0.46
RPRD1A-202ENST00000399022 ORM1P02763 201 aa12.15□□□□□ -0.46
RPRD1A-202ENST00000399022 CKS2P33552 79 aa12.15□□□□□ -0.46
RPRD1A-202ENST00000399022 MRPS16Q9Y3D3 137 aaKnown RBP12.15□□□□□ -0.46
RPRD1A-202ENST00000399022 PLCE1Q9P212 2302 aa12.15□□□□□ -0.46
RPRD1A-202ENST00000399022 HIST1H1AQ02539 215 aaPredicted RBP12.15□□□□□ -0.46
RPRD1A-202ENST00000399022 SPATA31B1PQ5VZV4 182 aa12.15□□□□□ -0.46
RPRD1A-202ENST00000399022 ONECUT1Q9UBC0 465 aa12.15□□□□□ -0.46
RPRD1A-202ENST00000399022 FREM1Q5H8C1 2179 aa12.15□□□□□ -0.46
RPRD1A-202ENST00000399022 A0A1W2PS18 150 aa12.15□□□□□ -0.46
RPRD1A-202ENST00000399022 OR2T8A6NH00 312 aa12.15□□□□□ -0.46
RPRD1A-202ENST00000399022 B3GALT5-AS1P59052 145 aa12.15□□□□□ -0.46
RPRD1A-202ENST00000399022 NRN1LQ496H8 165 aa12.15□□□□□ -0.46
RPRD1A-202ENST00000399022 PCNX3Q9H6A9 2034 aa12.15□□□□□ -0.47
RPRD1A-202ENST00000399022 LYRM7Q5U5X0 104 aa12.14□□□□□ -0.47
RPRD1A-202ENST00000399022 NPIPB3Q92617 1050 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms