RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 K7EMT4 169 aa10.04□□□□□ -0.8
VCX3A-202ENST00000398729 NOL3O60936 208 aaKnown RBP10.04□□□□□ -0.8
VCX3A-202ENST00000398729 B3GALNT1O75752 331 aa10.04□□□□□ -0.8
VCX3A-202ENST00000398729 IGKV1-5P01602 117 aa10.04□□□□□ -0.8
VCX3A-202ENST00000398729 CTSDP07339 412 aaPredicted RBP10.04□□□□□ -0.8
VCX3A-202ENST00000398729 CTSGP08311 255 aa10.04□□□□□ -0.8
VCX3A-202ENST00000398729 ADMP35318 185 aa10.04□□□□□ -0.8
VCX3A-202ENST00000398729 RELQ04864 619 aaPredicted RBP10.04□□□□□ -0.8
VCX3A-202ENST00000398729 IL18Q14116 193 aa10.04□□□□□ -0.8
VCX3A-202ENST00000398729 IZUMO4Q1ZYL8 232 aa10.04□□□□□ -0.8
VCX3A-202ENST00000398729 SP6Q3SY56 376 aa10.04□□□□□ -0.8
VCX3A-202ENST00000398729 LAMTOR1Q6IAA8 161 aa10.04□□□□□ -0.8
VCX3A-202ENST00000398729 SLC35G3Q8N808 338 aa10.04□□□□□ -0.8
VCX3A-202ENST00000398729 MARCH1Q8TCQ1 289 aa10.04□□□□□ -0.8
VCX3A-202ENST00000398729 SMIM4Q8WVI0 70 aa10.04□□□□□ -0.8
VCX3A-202ENST00000398729 DIRAS2Q96HU8 199 aa10.04□□□□□ -0.8
VCX3A-202ENST00000398729 TXN2Q99757 166 aa10.04□□□□□ -0.8
VCX3A-202ENST00000398729 SPAG8Q99932 426 aaPredicted RBP10.04□□□□□ -0.8
VCX3A-202ENST00000398729 CCDC59Q9P031 241 aaKnown RBP10.04□□□□□ -0.8
VCX3A-202ENST00000398729 C14orf166Q9Y224 244 aaKnown RBP10.04□□□□□ -0.8
VCX3A-202ENST00000398729 HERC2O95714 4834 aa10.04□□□□□ -0.8
VCX3A-202ENST00000398729 C15orf62A8K5M9 175 aa10.03□□□□□ -0.8
VCX3A-202ENST00000398729 DISC1C4P0D8 188 aa10.03□□□□□ -0.8
VCX3A-202ENST00000398729 CTDSPLO15194 276 aa10.03□□□□□ -0.8
VCX3A-202ENST00000398729 MT-CO2P00403 227 aa10.03□□□□□ -0.8
VCX3A-202ENST00000398729 IFNA17P01571 189 aa10.03□□□□□ -0.8
VCX3A-202ENST00000398729 P0C879 139 aa10.03□□□□□ -0.8
VCX3A-202ENST00000398729 UCP1P25874 307 aa10.03□□□□□ -0.8
VCX3A-202ENST00000398729 FCGR2BP31994 310 aaPredicted RBP10.03□□□□□ -0.8
VCX3A-202ENST00000398729 SNCAP37840 140 aa10.03□□□□□ -0.8
VCX3A-202ENST00000398729 SPINK9Q5DT21 86 aa10.03□□□□□ -0.8
VCX3A-202ENST00000398729 FAAP20Q6NZ36 180 aa10.03□□□□□ -0.8
VCX3A-202ENST00000398729 RNASE11Q8TAA1 199 aaKnown RBP10.03□□□□□ -0.8
VCX3A-202ENST00000398729 DYNC2LI1Q8TCX1 351 aa10.03□□□□□ -0.8
VCX3A-202ENST00000398729 PINX1Q96BK5 328 aaKnown RBP10.03□□□□□ -0.8
VCX3A-202ENST00000398729 RRNAD1Q96FB5 475 aaKnown RBP10.03□□□□□ -0.8
VCX3A-202ENST00000398729 RETNQ9HD89 108 aa10.03□□□□□ -0.8
VCX3A-202ENST00000398729 ALMS1Q8TCU4 4167 aa10.03□□□□□ -0.8
VCX3A-202ENST00000398729 IGHV3OR16-8A0A075B7F1 116 aa10.02□□□□□ -0.81
VCX3A-202ENST00000398729 A0A0B4J293 547 aa10.02□□□□□ -0.81
VCX3A-202ENST00000398729 INS-IGF2F8WCM5 200 aa10.02□□□□□ -0.81
VCX3A-202ENST00000398729 TSPAN4O14817 238 aa10.02□□□□□ -0.81
VCX3A-202ENST00000398729 ST8SIA3O43173 380 aa10.02□□□□□ -0.81
VCX3A-202ENST00000398729 GNG7O60262 68 aa10.02□□□□□ -0.81
VCX3A-202ENST00000398729 AKAIN1P0CW23 69 aa10.02□□□□□ -0.81
VCX3A-202ENST00000398729 RPL5P46777 297 aaKnown RBP10.02□□□□□ -0.81
VCX3A-202ENST00000398729 SURF2Q15527 256 aaPredicted RBP10.02□□□□□ -0.81
VCX3A-202ENST00000398729 FAM110AQ9BQ89 295 aa10.02□□□□□ -0.81
VCX3A-202ENST00000398729 GGTLC1Q9BX51 225 aa10.02□□□□□ -0.81
VCX3A-202ENST00000398729 C6orf62Q9GZU0 229 aaPredicted RBP10.02□□□□□ -0.81
VCX3A-202ENST00000398729 LOC102724200A0A096LPH7 203 aaPredicted RBP10.01□□□□□ -0.81
VCX3A-202ENST00000398729 TEX13DA0A0J9YY54 714 aaPredicted RBP10.01□□□□□ -0.81
VCX3A-202ENST00000398729 ZNF207O43670 478 aaKnown RBP10.01□□□□□ -0.81
VCX3A-202ENST00000398729 YIF1AO95070 293 aa10.01□□□□□ -0.81
VCX3A-202ENST00000398729 IGHV3-48P01763 117 aa10.01□□□□□ -0.81
VCX3A-202ENST00000398729 OR5AC1P0C628 307 aa10.01□□□□□ -0.81
VCX3A-202ENST00000398729 HOXA1P49639 335 aaPredicted RBP10.01□□□□□ -0.81
VCX3A-202ENST00000398729 SUB1P53999 127 aaKnown RBP eCLIP10.01□□□□□ -0.81
VCX3A-202ENST00000398729 FAM219AQ8IW50 185 aa10.01□□□□□ -0.81
VCX3A-202ENST00000398729 DUSP18Q8NEJ0 188 aa10.01□□□□□ -0.81
VCX3A-202ENST00000398729 OR4C16Q8NGL9 310 aa10.01□□□□□ -0.81
VCX3A-202ENST00000398729 PRRT1Q99946 306 aa10.01□□□□□ -0.81
VCX3A-202ENST00000398729 NXF2Q9GZY0 626 aaKnown RBP10.01□□□□□ -0.81
VCX3A-202ENST00000398729 TMEM222Q9H0R3 208 aa10.01□□□□□ -0.81
VCX3A-202ENST00000398729 ENY2Q9NPA8 101 aa10.01□□□□□ -0.81
VCX3A-202ENST00000398729 SMPXQ9UHP9 88 aa10.01□□□□□ -0.81
VCX3A-202ENST00000398729 CORTO00230 105 aa10□□□□□ -0.81
VCX3A-202ENST00000398729 CDS2O95674 445 aa10□□□□□ -0.81
VCX3A-202ENST00000398729 ETV6P41212 452 aa10□□□□□ -0.81
VCX3A-202ENST00000398729 NPBWR1P48145 328 aa10□□□□□ -0.81
VCX3A-202ENST00000398729 OR10C1Q96KK4 312 aa10□□□□□ -0.81
VCX3A-202ENST00000398729 RTBDNQ9BSG5 229 aaPredicted RBP10□□□□□ -0.81
VCX3A-202ENST00000398729 SLIRPQ9GZT3 109 aaKnown RBP10□□□□□ -0.81
VCX3A-202ENST00000398729 NAA60Q9H7X0 242 aa10□□□□□ -0.81
VCX3A-202ENST00000398729 RSL24D1Q9UHA3 163 aaKnown RBP10□□□□□ -0.81
VCX3A-202ENST00000398729 PCLOQ9Y6V0 5065 aa9.99□□□□□ -0.81
VCX3A-202ENST00000398729 A0A0G2JRQ6 117 aa9.99□□□□□ -0.81
VCX3A-202ENST00000398729 IGHV7-4-1A0A0J9YVY3 117 aa9.99□□□□□ -0.81
VCX3A-202ENST00000398729 OR4C46A6NHA9 309 aa9.99□□□□□ -0.81
VCX3A-202ENST00000398729 H3BMQ9 156 aa9.99□□□□□ -0.81
VCX3A-202ENST00000398729 GSTZ1O43708 216 aaPredicted RBP9.99□□□□□ -0.81
VCX3A-202ENST00000398729 DHODHQ02127 395 aa9.99□□□□□ -0.81
VCX3A-202ENST00000398729 TMEM116Q8NCL8 245 aa9.99□□□□□ -0.81
VCX3A-202ENST00000398729 OR51S1Q8NGJ8 323 aa9.99□□□□□ -0.81
VCX3A-202ENST00000398729 IL17DQ8TAD2 202 aa9.99□□□□□ -0.81
VCX3A-202ENST00000398729 GLYATL2Q8WU03 294 aa9.99□□□□□ -0.81
VCX3A-202ENST00000398729 RBPMSQ93062 196 aaKnown RBP9.99□□□□□ -0.81
VCX3A-202ENST00000398729 ZNF414Q96IQ9 312 aa9.99□□□□□ -0.81
VCX3A-202ENST00000398729 GINS3Q9BRX5 216 aa9.99□□□□□ -0.81
VCX3A-202ENST00000398729 RHPN1-AS1Q9BWJ2 59 aa9.99□□□□□ -0.81
VCX3A-202ENST00000398729 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.99□□□□□ -0.81
VCX3A-202ENST00000398729 UBQLN2Q9UHD9 624 aa9.99□□□□□ -0.81
VCX3A-202ENST00000398729 GPR132Q9UNW8 380 aa9.99□□□□□ -0.81
VCX3A-202ENST00000398729 TRAV14DV4A0A0A6YYC5 116 aa9.98□□□□□ -0.81
VCX3A-202ENST00000398729 ANKRD20A5PA0PJZ0 165 aa9.98□□□□□ -0.81
VCX3A-202ENST00000398729 FABP12A6NFH5 140 aa9.98□□□□□ -0.81
VCX3A-202ENST00000398729 CRYM-AS1A6NIL9 109 aa9.98□□□□□ -0.81
VCX3A-202ENST00000398729 CHEK1O14757 476 aa9.98□□□□□ -0.81
VCX3A-202ENST00000398729 RNASE2P10153 161 aaKnown RBP9.98□□□□□ -0.81
VCX3A-202ENST00000398729 TNFSF8P32971 234 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms