RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 GFRALQ6UXV0 394 aa14.97□□□□□ -0.01
CHRFAM7A-202ENST00000397827 PDE6DO43924 150 aa14.96□□□□□ -0.01
CHRFAM7A-202ENST00000397827 TMEM256Q8N2U0 113 aa14.96□□□□□ -0.01
CHRFAM7A-202ENST00000397827 ZNF114Q8NC26 417 aa14.96□□□□□ -0.01
CHRFAM7A-202ENST00000397827 CCL17Q92583 94 aa14.96□□□□□ -0.01
CHRFAM7A-202ENST00000397827 LINC00312Q9Y6C7 94 aa14.96□□□□□ -0.01
CHRFAM7A-202ENST00000397827 TLN1Q9Y490 2541 aaKnown RBP14.96□□□□□ -0.01
CHRFAM7A-202ENST00000397827 REG1BP48304 166 aa14.96□□□□□ -0.01
CHRFAM7A-202ENST00000397827 EFNB3Q15768 340 aa14.96□□□□□ -0.01
CHRFAM7A-202ENST00000397827 LINC01551Q86U37 167 aa14.96□□□□□ -0.01
CHRFAM7A-202ENST00000397827 SAP30LQ9HAJ7 183 aa14.96□□□□□ -0.01
CHRFAM7A-202ENST00000397827 KCNIP2Q9NS61 270 aa14.96□□□□□ -0.01
CHRFAM7A-202ENST00000397827 FAM3BP58499 235 aaPredicted RBP14.96□□□□□ -0.02
CHRFAM7A-202ENST00000397827 POU2AF1Q16633 256 aa14.96□□□□□ -0.02
CHRFAM7A-202ENST00000397827 RTL8BQ17RB0 113 aa14.96□□□□□ -0.02
CHRFAM7A-202ENST00000397827 TMEM249Q2WGJ8 235 aa14.96□□□□□ -0.02
CHRFAM7A-202ENST00000397827 PRR30Q53SZ7 412 aaPredicted RBP14.96□□□□□ -0.02
CHRFAM7A-202ENST00000397827 STPG4Q8N801 248 aa14.96□□□□□ -0.02
CHRFAM7A-202ENST00000397827 NUDT10Q8NFP7 164 aa14.96□□□□□ -0.02
CHRFAM7A-202ENST00000397827 VPS25Q9BRG1 176 aa14.96□□□□□ -0.02
CHRFAM7A-202ENST00000397827 PLEKHA3Q9HB20 300 aa14.96□□□□□ -0.02
CHRFAM7A-202ENST00000397827 A0A1W2PN81 502 aa14.95□□□□□ -0.02
CHRFAM7A-202ENST00000397827 UPK2O00526 184 aa14.95□□□□□ -0.02
CHRFAM7A-202ENST00000397827 NUPR1O60356 82 aa14.95□□□□□ -0.02
CHRFAM7A-202ENST00000397827 FOXH1O75593 365 aa14.95□□□□□ -0.02
CHRFAM7A-202ENST00000397827 VENTXO95231 258 aa14.95□□□□□ -0.02
CHRFAM7A-202ENST00000397827 CNN1P51911 297 aaKnown RBP14.95□□□□□ -0.02
CHRFAM7A-202ENST00000397827 ACTL10Q5JWF8 245 aa14.95□□□□□ -0.02
CHRFAM7A-202ENST00000397827 ANAPC16Q96DE5 110 aa14.95□□□□□ -0.02
CHRFAM7A-202ENST00000397827 PRNDQ9UKY0 176 aa14.95□□□□□ -0.02
CHRFAM7A-202ENST00000397827 CXorf1O96002 111 aa14.95□□□□□ -0.02
CHRFAM7A-202ENST00000397827 C1QTNF9P0C862 333 aa14.95□□□□□ -0.02
CHRFAM7A-202ENST00000397827 SAA1P0DJI8 122 aaPredicted RBP14.95□□□□□ -0.02
CHRFAM7A-202ENST00000397827 LRFN3Q9BTN0 628 aa14.95□□□□□ -0.02
CHRFAM7A-202ENST00000397827 MRPL20Q9BYC9 149 aaKnown RBP14.95□□□□□ -0.02
CHRFAM7A-202ENST00000397827 ELOVL5Q9NYP7 299 aa14.95□□□□□ -0.02
CHRFAM7A-202ENST00000397827 SCO2A0A1W2PP80 73 aa14.94□□□□□ -0.02
CHRFAM7A-202ENST00000397827 H1FXQ92522 213 aaKnown RBP14.94□□□□□ -0.02
CHRFAM7A-202ENST00000397827 YTHDF2Q9Y5A9 579 aaKnown RBP14.94□□□□□ -0.02
CHRFAM7A-202ENST00000397827 TRBV20OR9-2A0A075B6H5 130 aa14.94□□□□□ -0.02
CHRFAM7A-202ENST00000397827 TEX50A0A1B0GTY4 177 aa14.94□□□□□ -0.02
CHRFAM7A-202ENST00000397827 ACTL6BO94805 426 aa14.94□□□□□ -0.02
CHRFAM7A-202ENST00000397827 OR5G3P0C626 314 aa14.94□□□□□ -0.02
CHRFAM7A-202ENST00000397827 PRCDQ00LT1 54 aa14.94□□□□□ -0.02
CHRFAM7A-202ENST00000397827 MLANAQ16655 118 aa14.94□□□□□ -0.02
CHRFAM7A-202ENST00000397827 TMEM183BQ1AE95 376 aa14.94□□□□□ -0.02
CHRFAM7A-202ENST00000397827 TMEM200BQ69YZ2 307 aa14.94□□□□□ -0.02
CHRFAM7A-202ENST00000397827 LYPD2Q6UXB3 125 aa14.94□□□□□ -0.02
CHRFAM7A-202ENST00000397827 Q6ZVH6 145 aa14.94□□□□□ -0.02
CHRFAM7A-202ENST00000397827 OR10W1Q8NGF6 305 aa14.94□□□□□ -0.02
CHRFAM7A-202ENST00000397827 ORAOV1Q8WV07 137 aa14.94□□□□□ -0.02
CHRFAM7A-202ENST00000397827 LOC105371242A0A075B767 164 aa14.93□□□□□ -0.02
CHRFAM7A-202ENST00000397827 CIDEAO60543 219 aa14.93□□□□□ -0.02
CHRFAM7A-202ENST00000397827 ZNF714Q96N38 554 aa14.93□□□□□ -0.02
CHRFAM7A-202ENST00000397827 VAMP8Q9BV40 100 aa14.93□□□□□ -0.02
CHRFAM7A-202ENST00000397827 PPIAL4EA0A075B759 164 aa14.93□□□□□ -0.02
CHRFAM7A-202ENST00000397827 PPIAL4DF5H284 164 aa14.93□□□□□ -0.02
CHRFAM7A-202ENST00000397827 PPIAL4FP0DN26 164 aa14.93□□□□□ -0.02
CHRFAM7A-202ENST00000397827 GATA2P23769 480 aaPredicted RBP14.93□□□□□ -0.02
CHRFAM7A-202ENST00000397827 RANP62826 216 aaKnown RBP14.93□□□□□ -0.02
CHRFAM7A-202ENST00000397827 UBE2V1Q13404 147 aa14.93□□□□□ -0.02
CHRFAM7A-202ENST00000397827 DIAPH2-AS1Q14236 149 aa14.93□□□□□ -0.02
CHRFAM7A-202ENST00000397827 NEUROG1Q92886 237 aa14.93□□□□□ -0.02
CHRFAM7A-202ENST00000397827 RPH3ALQ9UNE2 315 aa14.93□□□□□ -0.02
CHRFAM7A-202ENST00000397827 M0QZ24 198 aa14.92□□□□□ -0.02
CHRFAM7A-202ENST00000397827 GCHFRP30047 84 aa14.92□□□□□ -0.02
CHRFAM7A-202ENST00000397827 NBL1P41271 181 aa14.92□□□□□ -0.02
CHRFAM7A-202ENST00000397827 OR4P4Q8NGL7 312 aa14.92□□□□□ -0.02
CHRFAM7A-202ENST00000397827 IGKV1OR2-108A0A075B7D4 117 aa14.92□□□□□ -0.02
CHRFAM7A-202ENST00000397827 TMEM178BH3BS89 294 aa14.92□□□□□ -0.02
CHRFAM7A-202ENST00000397827 RAB31Q13636 194 aa14.92□□□□□ -0.02
CHRFAM7A-202ENST00000397827 TEX43Q6ZNM6 134 aa14.92□□□□□ -0.02
CHRFAM7A-202ENST00000397827 ZNF833PQ6ZTB9 187 aa14.92□□□□□ -0.02
CHRFAM7A-202ENST00000397827 OR2T10Q8NGZ9 312 aa14.92□□□□□ -0.02
CHRFAM7A-202ENST00000397827 ZNF257Q9Y2Q1 563 aa14.92□□□□□ -0.02
CHRFAM7A-202ENST00000397827 F6UZH7 168 aa14.91□□□□□ -0.02
CHRFAM7A-202ENST00000397827 RHOBP62745 196 aa14.91□□□□□ -0.02
CHRFAM7A-202ENST00000397827 FAM78BQ5VT40 261 aa14.91□□□□□ -0.02
CHRFAM7A-202ENST00000397827 HARBI1Q96MB7 349 aa14.91□□□□□ -0.02
CHRFAM7A-202ENST00000397827 PRR20EP86478 221 aa14.91□□□□□ -0.02
CHRFAM7A-202ENST00000397827 PRR20CP86479 221 aa14.91□□□□□ -0.02
CHRFAM7A-202ENST00000397827 PRR20DP86480 221 aa14.91□□□□□ -0.02
CHRFAM7A-202ENST00000397827 PRR20BP86481 221 aa14.91□□□□□ -0.02
CHRFAM7A-202ENST00000397827 PRR20AP86496 221 aa14.91□□□□□ -0.02
CHRFAM7A-202ENST00000397827 MIR17HGQ75NE6 70 aa14.91□□□□□ -0.02
CHRFAM7A-202ENST00000397827 TMEM106BQ9NUM4 274 aa14.91□□□□□ -0.02
CHRFAM7A-202ENST00000397827 RNF24Q9Y225 148 aa14.91□□□□□ -0.02
CHRFAM7A-202ENST00000397827 PPBPP02775 128 aa14.9□□□□□ -0.02
CHRFAM7A-202ENST00000397827 LINC00869P0C866 280 aa14.9□□□□□ -0.02
CHRFAM7A-202ENST00000397827 TPTE2P1Q5T6R2 138 aa14.9□□□□□ -0.02
CHRFAM7A-202ENST00000397827 VN1R17PQ8TDU5 208 aa14.9□□□□□ -0.02
CHRFAM7A-202ENST00000397827 JKAMPQ9P055 326 aa14.9□□□□□ -0.02
CHRFAM7A-202ENST00000397827 NAV3Q8IVL0 2385 aa14.9□□□□□ -0.02
CHRFAM7A-202ENST00000397827 PLXNB1O43157 2135 aa14.9□□□□□ -0.02
CHRFAM7A-202ENST00000397827 MEF2CQ06413 473 aaPredicted RBP14.9□□□□□ -0.02
CHRFAM7A-202ENST00000397827 TMEM30BQ3MIR4 351 aa14.9□□□□□ -0.02
CHRFAM7A-202ENST00000397827 C16orf54Q6UWD8 224 aa14.9□□□□□ -0.02
CHRFAM7A-202ENST00000397827 E7EUB6 86 aa14.9□□□□□ -0.02
CHRFAM7A-202ENST00000397827 H0YJW9 148 aa14.9□□□□□ -0.02
CHRFAM7A-202ENST00000397827 FOXC1Q12948 553 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms