RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 ANAPC16Q96DE5 110 aa8.53□□□□□ -1.04
CPSF1P1-201ENST00000397477 SFRP2Q96HF1 295 aa8.53□□□□□ -1.04
CPSF1P1-201ENST00000397477 GSX1Q9H4S2 264 aaPredicted RBP8.53□□□□□ -1.04
CPSF1P1-201ENST00000397477 SLC45A2Q9UMX9 530 aa8.53□□□□□ -1.04
CPSF1P1-201ENST00000397477 INSIG2Q9Y5U4 225 aa8.53□□□□□ -1.04
CPSF1P1-201ENST00000397477 SMG1Q96Q15 3661 aaKnown RBP8.53□□□□□ -1.04
CPSF1P1-201ENST00000397477 MYO18BQ8IUG5 2567 aa8.52□□□□□ -1.05
CPSF1P1-201ENST00000397477 CREBBPQ92793 2442 aa8.52□□□□□ -1.05
CPSF1P1-201ENST00000397477 IGHV1-69-2A0A0G2JMI3 117 aa8.52□□□□□ -1.05
CPSF1P1-201ENST00000397477 CEACAM4O75871 244 aa8.52□□□□□ -1.05
CPSF1P1-201ENST00000397477 WNT2P09544 360 aa8.52□□□□□ -1.05
CPSF1P1-201ENST00000397477 VMA21Q3ZAQ7 101 aa8.52□□□□□ -1.05
CPSF1P1-201ENST00000397477 IGFL3Q6UXB1 125 aa8.52□□□□□ -1.05
CPSF1P1-201ENST00000397477 OR8I2Q8N0Y5 310 aa8.52□□□□□ -1.05
CPSF1P1-201ENST00000397477 TMEM170AQ8WVE7 144 aa8.52□□□□□ -1.05
CPSF1P1-201ENST00000397477 RPEQ96AT9 228 aa8.52□□□□□ -1.05
CPSF1P1-201ENST00000397477 RNASE7Q9H1E1 156 aaKnown RBP8.52□□□□□ -1.05
CPSF1P1-201ENST00000397477 TECRQ9NZ01 308 aaKnown RBP8.52□□□□□ -1.05
CPSF1P1-201ENST00000397477 DYSFO75923 2080 aa8.52□□□□□ -1.05
CPSF1P1-201ENST00000397477 FAM208BQ5VWN6 2430 aa8.52□□□□□ -1.05
CPSF1P1-201ENST00000397477 CA1P00915 261 aaPredicted RBP8.52□□□□□ -1.05
CPSF1P1-201ENST00000397477 RBP4P02753 201 aa8.52□□□□□ -1.05
CPSF1P1-201ENST00000397477 IL3RAP26951 378 aa8.52□□□□□ -1.05
CPSF1P1-201ENST00000397477 CEACAM8P31997 349 aaPredicted RBP8.52□□□□□ -1.05
CPSF1P1-201ENST00000397477 TAS2R45P59539 299 aa8.52□□□□□ -1.05
CPSF1P1-201ENST00000397477 ARF6P62330 175 aa8.52□□□□□ -1.05
CPSF1P1-201ENST00000397477 LEMD1Q68G75 181 aa8.52□□□□□ -1.05
CPSF1P1-201ENST00000397477 HIST3H2BBQ8N257 126 aa8.52□□□□□ -1.05
CPSF1P1-201ENST00000397477 SRD5A3Q9H8P0 318 aa8.52□□□□□ -1.05
CPSF1P1-201ENST00000397477 TPSG1Q9NRR2 321 aa8.52□□□□□ -1.05
CPSF1P1-201ENST00000397477 PITPNC1Q9UKF7 332 aa8.52□□□□□ -1.05
CPSF1P1-201ENST00000397477 LINC00312Q9Y6C7 94 aa8.52□□□□□ -1.05
CPSF1P1-201ENST00000397477 TSTD3H0UI37 97 aa8.52□□□□□ -1.05
CPSF1P1-201ENST00000397477 RBFOX2O43251 390 aaKnown RBP eCLIP8.52□□□□□ -1.05
CPSF1P1-201ENST00000397477 LHBP01229 141 aa8.52□□□□□ -1.05
CPSF1P1-201ENST00000397477 EIF4EBP1Q13541 118 aaPredicted RBP8.52□□□□□ -1.05
CPSF1P1-201ENST00000397477 OR1P1Q8NH06 330 aa8.52□□□□□ -1.05
CPSF1P1-201ENST00000397477 C22orf15Q8WYQ4 148 aa8.52□□□□□ -1.05
CPSF1P1-201ENST00000397477 LINC00479Q96M42 142 aa8.52□□□□□ -1.05
CPSF1P1-201ENST00000397477 ZNF835Q9Y2P0 537 aa8.52□□□□□ -1.05
CPSF1P1-201ENST00000397477 STAG3L2P0CL84 134 aa8.51□□□□□ -1.05
CPSF1P1-201ENST00000397477 STAG3L3P0CL85 134 aa8.51□□□□□ -1.05
CPSF1P1-201ENST00000397477 SUB1P53999 127 aaKnown RBP eCLIP8.51□□□□□ -1.05
CPSF1P1-201ENST00000397477 FKBP11Q9NYL4 201 aa8.51□□□□□ -1.05
CPSF1P1-201ENST00000397477 NAT8BQ9UHF3 227 aa8.51□□□□□ -1.05
CPSF1P1-201ENST00000397477 E7EQL1 145 aa8.51□□□□□ -1.05
CPSF1P1-201ENST00000397477 TMEM178BH3BS89 294 aa8.51□□□□□ -1.05
CPSF1P1-201ENST00000397477 PCP4P48539 62 aa8.51□□□□□ -1.05
CPSF1P1-201ENST00000397477 TBR1Q16650 682 aa8.51□□□□□ -1.05
CPSF1P1-201ENST00000397477 CENPWQ5EE01 88 aa8.51□□□□□ -1.05
CPSF1P1-201ENST00000397477 RAXQ9Y2V3 346 aa8.51□□□□□ -1.05
CPSF1P1-201ENST00000397477 TACC2O95359 2948 aa8.51□□□□□ -1.05
CPSF1P1-201ENST00000397477 RELNP78509 3460 aa8.51□□□□□ -1.05
CPSF1P1-201ENST00000397477 SNURFLB1AK76 121 aa8.51□□□□□ -1.05
CPSF1P1-201ENST00000397477 NTF3P20783 257 aa8.51□□□□□ -1.05
CPSF1P1-201ENST00000397477 CNTFRP26992 372 aa8.51□□□□□ -1.05
CPSF1P1-201ENST00000397477 GPX4P36969 197 aaPredicted RBP8.51□□□□□ -1.05
CPSF1P1-201ENST00000397477 HLA-DRB5Q30154 266 aa8.51□□□□□ -1.05
CPSF1P1-201ENST00000397477 SLC25A48Q6ZT89 311 aaKnown RBP8.51□□□□□ -1.05
CPSF1P1-201ENST00000397477 MUC15Q8N387 334 aa8.51□□□□□ -1.05
CPSF1P1-201ENST00000397477 OR4C13Q8NGP0 309 aa8.51□□□□□ -1.05
CPSF1P1-201ENST00000397477 HIST1H2BLQ99880 126 aa8.51□□□□□ -1.05
CPSF1P1-201ENST00000397477 ZNF430Q9H8G1 570 aaPredicted RBP8.51□□□□□ -1.05
CPSF1P1-201ENST00000397477 KALRNO60229 2985 aa8.51□□□□□ -1.05
CPSF1P1-201ENST00000397477 IFITM10A6NMD0 228 aa8.5□□□□□ -1.05
CPSF1P1-201ENST00000397477 E7EUB6 86 aa8.5□□□□□ -1.05
CPSF1P1-201ENST00000397477 THBDP07204 575 aa8.5□□□□□ -1.05
CPSF1P1-201ENST00000397477 PFN1P07737 140 aaKnown RBP8.5□□□□□ -1.05
CPSF1P1-201ENST00000397477 CAMPP49913 170 aa8.5□□□□□ -1.05
CPSF1P1-201ENST00000397477 LYZP61626 148 aa8.5□□□□□ -1.05
CPSF1P1-201ENST00000397477 SSBP2P81877 361 aaPredicted RBP8.5□□□□□ -1.05
CPSF1P1-201ENST00000397477 TPPP3Q9BW30 176 aa8.5□□□□□ -1.05
CPSF1P1-201ENST00000397477 FBXL15Q9H469 300 aa8.5□□□□□ -1.05
CPSF1P1-201ENST00000397477 CNN1P51911 297 aaKnown RBP8.5□□□□□ -1.05
CPSF1P1-201ENST00000397477 NUBP1P53384 320 aa8.5□□□□□ -1.05
CPSF1P1-201ENST00000397477 PRCDQ00LT1 54 aa8.5□□□□□ -1.05
CPSF1P1-201ENST00000397477 BATFQ16520 125 aa8.5□□□□□ -1.05
CPSF1P1-201ENST00000397477 OR1L6Q8NGR2 347 aa8.5□□□□□ -1.05
CPSF1P1-201ENST00000397477 TMEM18Q96B42 140 aa8.5□□□□□ -1.05
CPSF1P1-201ENST00000397477 RITA1Q96K30 269 aa8.5□□□□□ -1.05
CPSF1P1-201ENST00000397477 FOXA2Q9Y261 457 aaPredicted RBP8.5□□□□□ -1.05
CPSF1P1-201ENST00000397477 ACACBO00763 2458 aa8.5□□□□□ -1.05
CPSF1P1-201ENST00000397477 TRBV24-1A0A075B6N3 115 aa8.5□□□□□ -1.05
CPSF1P1-201ENST00000397477 CFHR2P36980 270 aa8.5□□□□□ -1.05
CPSF1P1-201ENST00000397477 C10orf113Q5VZT2 155 aa8.5□□□□□ -1.05
CPSF1P1-201ENST00000397477 TMEM14BQ9NUH8 114 aa8.5□□□□□ -1.05
CPSF1P1-201ENST00000397477 WASHC3Q9Y3C0 194 aa8.5□□□□□ -1.05
CPSF1P1-201ENST00000397477 ELOA3CA0A087WX78 387 aaPredicted RBP8.49□□□□□ -1.05
CPSF1P1-201ENST00000397477 NCBP2LA6PVI3 153 aaKnown RBP8.49□□□□□ -1.05
CPSF1P1-201ENST00000397477 TCAPO15273 167 aa8.49□□□□□ -1.05
CPSF1P1-201ENST00000397477 SLC25A5P05141 298 aaKnown RBP8.49□□□□□ -1.05
CPSF1P1-201ENST00000397477 UBE2G1P62253 170 aa8.49□□□□□ -1.05
CPSF1P1-201ENST00000397477 TMEM256Q8N2U0 113 aa8.49□□□□□ -1.05
CPSF1P1-201ENST00000397477 PNKDQ8N490 385 aa8.49□□□□□ -1.05
CPSF1P1-201ENST00000397477 FAM169BQ8N8A8 192 aa8.49□□□□□ -1.05
CPSF1P1-201ENST00000397477 LPAR2Q9HBW0 351 aa8.49□□□□□ -1.05
CPSF1P1-201ENST00000397477 CTSZQ9UBR2 303 aa8.49□□□□□ -1.05
CPSF1P1-201ENST00000397477 H0YJW9 148 aa8.49□□□□□ -1.05
CPSF1P1-201ENST00000397477 TGOLN2O43493 480 aa8.49□□□□□ -1.05
CPSF1P1-201ENST00000397477 PMCHP20382 165 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms