RNA–Protein interactions for RNA: ENST00000397459.6

CNTN4-201, Transcript of contactin 4, humanhuman

TSL 1 (best) BASIC

Gene CNTN4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-201ENST00000397459 IGFBP2P18065 325 aa6.67□□□□□ -1.34
CNTN4-201ENST00000397459 EGR1P18146 543 aa6.67□□□□□ -1.34
CNTN4-201ENST00000397459 USF1P22415 310 aaPredicted RBP6.67□□□□□ -1.34
CNTN4-201ENST00000397459 KLF5Q13887 457 aaPredicted RBP6.67□□□□□ -1.34
CNTN4-201ENST00000397459 CT83Q5H943 113 aa6.67□□□□□ -1.34
CNTN4-201ENST00000397459 RNFT1Q5M7Z0 435 aa6.67□□□□□ -1.34
CNTN4-201ENST00000397459 SLC25A48Q6ZT89 311 aaKnown RBP6.67□□□□□ -1.34
CNTN4-201ENST00000397459 OR8I2Q8N0Y5 310 aa6.67□□□□□ -1.34
CNTN4-201ENST00000397459 MBD3L2Q8NHZ7 208 aaPredicted RBP6.67□□□□□ -1.34
CNTN4-201ENST00000397459 BORCS7Q96B45 105 aa6.67□□□□□ -1.34
CNTN4-201ENST00000397459 C1orf159Q96HA4 380 aa6.67□□□□□ -1.34
CNTN4-201ENST00000397459 GRAMD2BQ96HH9 432 aa6.67□□□□□ -1.34
CNTN4-201ENST00000397459 COL25A1Q9BXS0 654 aaPredicted RBP6.67□□□□□ -1.34
CNTN4-201ENST00000397459 METRNQ9UJH8 293 aa6.67□□□□□ -1.34
CNTN4-201ENST00000397459 TP53TG3Q9ULZ0 132 aa6.67□□□□□ -1.34
CNTN4-201ENST00000397459 FRYQ5TBA9 3013 aa6.67□□□□□ -1.34
CNTN4-201ENST00000397459 NKX6-3A6NJ46 265 aa6.67□□□□□ -1.34
CNTN4-201ENST00000397459 DIRC3C9JPN6 131 aa6.67□□□□□ -1.34
CNTN4-201ENST00000397459 ZNHIT1O43257 154 aa6.67□□□□□ -1.34
CNTN4-201ENST00000397459 OR7C2O60412 319 aa6.67□□□□□ -1.34
CNTN4-201ENST00000397459 SAA2P0DJI9 122 aaPredicted RBP6.67□□□□□ -1.34
CNTN4-201ENST00000397459 HIST1H1EP10412 219 aaKnown RBP6.67□□□□□ -1.34
CNTN4-201ENST00000397459 AMTP48728 403 aa6.67□□□□□ -1.34
CNTN4-201ENST00000397459 PRRX1P54821 245 aa6.67□□□□□ -1.34
CNTN4-201ENST00000397459 ODF1Q14990 250 aa6.67□□□□□ -1.34
CNTN4-201ENST00000397459 C17orf58Q2M2W7 97 aa6.67□□□□□ -1.34
CNTN4-201ENST00000397459 RPL39P5Q59GN2 51 aa6.67□□□□□ -1.34
CNTN4-201ENST00000397459 CT45A1Q5HYN5 189 aa6.67□□□□□ -1.34
CNTN4-201ENST00000397459 SMIM15Q7Z3B0 74 aa6.67□□□□□ -1.34
CNTN4-201ENST00000397459 FDCSPQ8NFU4 85 aa6.67□□□□□ -1.34
CNTN4-201ENST00000397459 CT45A3Q8NHU0 189 aa6.67□□□□□ -1.34
CNTN4-201ENST00000397459 IGF2BP2-AS1Q96M15 143 aa6.67□□□□□ -1.34
CNTN4-201ENST00000397459 SLC25A33Q9BSK2 321 aa6.67□□□□□ -1.34
CNTN4-201ENST00000397459 MSL2Q9HCI7 577 aa6.67□□□□□ -1.34
CNTN4-201ENST00000397459 C1RLQ9NZP8 487 aa6.67□□□□□ -1.34
CNTN4-201ENST00000397459 RPUSD1Q9UJJ7 312 aaKnown RBP6.67□□□□□ -1.34
CNTN4-201ENST00000397459 LINC00312Q9Y6C7 94 aa6.67□□□□□ -1.34
CNTN4-201ENST00000397459 C22orf46C9J442 243 aa6.66□□□□□ -1.34
CNTN4-201ENST00000397459 TMEM238C9JI98 176 aa6.66□□□□□ -1.34
CNTN4-201ENST00000397459 OR2J3O76001 311 aa6.66□□□□□ -1.34
CNTN4-201ENST00000397459 CGAP01215 116 aa6.66□□□□□ -1.34
CNTN4-201ENST00000397459 APCSP02743 223 aa6.66□□□□□ -1.34
CNTN4-201ENST00000397459 IRF2P14316 349 aa6.66□□□□□ -1.34
CNTN4-201ENST00000397459 CRYBB3P26998 211 aa6.66□□□□□ -1.34
CNTN4-201ENST00000397459 LINC00310P59036 64 aa6.66□□□□□ -1.34
CNTN4-201ENST00000397459 PAX2Q02962 417 aa6.66□□□□□ -1.34
CNTN4-201ENST00000397459 TMEM177Q53S58 311 aa6.66□□□□□ -1.34
CNTN4-201ENST00000397459 STUMQ69YW2 141 aa6.66□□□□□ -1.34
CNTN4-201ENST00000397459 MIR17HGQ75NE6 70 aa6.66□□□□□ -1.34
CNTN4-201ENST00000397459 TCF23Q7RTU1 214 aa6.66□□□□□ -1.34
CNTN4-201ENST00000397459 NUDT10Q8NFP7 164 aa6.66□□□□□ -1.34
CNTN4-201ENST00000397459 TMEM208Q9BTX3 173 aa6.66□□□□□ -1.34
CNTN4-201ENST00000397459 GNB4Q9HAV0 340 aa6.66□□□□□ -1.34
CNTN4-201ENST00000397459 MRPS16Q9Y3D3 137 aaKnown RBP6.66□□□□□ -1.34
CNTN4-201ENST00000397459 USF3Q68DE3 2245 aa6.66□□□□□ -1.34
CNTN4-201ENST00000397459 GRIFINA4D1Z8 144 aa6.66□□□□□ -1.34
CNTN4-201ENST00000397459 FAM231BA6NCW3 169 aa6.66□□□□□ -1.34
CNTN4-201ENST00000397459 PGPEP1LA6NFU8 196 aa6.66□□□□□ -1.34
CNTN4-201ENST00000397459 NPSP0C0P6 89 aa6.66□□□□□ -1.34
CNTN4-201ENST00000397459 RNASE2P10153 161 aaKnown RBP6.66□□□□□ -1.34
CNTN4-201ENST00000397459 PMCHP20382 165 aa6.66□□□□□ -1.34
CNTN4-201ENST00000397459 CTRLP40313 264 aa6.66□□□□□ -1.34
CNTN4-201ENST00000397459 COMPP49747 757 aaPredicted RBP6.66□□□□□ -1.34
CNTN4-201ENST00000397459 RPS16P62249 146 aaKnown RBP6.66□□□□□ -1.34
CNTN4-201ENST00000397459 TEX36Q5VZQ5 186 aa6.66□□□□□ -1.34
CNTN4-201ENST00000397459 VWA1Q6PCB0 445 aa6.66□□□□□ -1.34
CNTN4-201ENST00000397459 VHLLQ6RSH7 139 aa6.66□□□□□ -1.34
CNTN4-201ENST00000397459 ASCL5Q7RTU5 278 aa6.66□□□□□ -1.34
CNTN4-201ENST00000397459 TPRX1Q8N7U7 411 aa6.66□□□□□ -1.34
CNTN4-201ENST00000397459 OR2D3Q8NGH3 330 aa6.66□□□□□ -1.34
CNTN4-201ENST00000397459 VN1R17PQ8TDU5 208 aa6.66□□□□□ -1.34
CNTN4-201ENST00000397459 ZNF430Q9H8G1 570 aaPredicted RBP6.66□□□□□ -1.34
CNTN4-201ENST00000397459 DNAJC4Q9NNZ3 241 aa6.66□□□□□ -1.34
CNTN4-201ENST00000397459 NRN1Q9NPD7 142 aa6.66□□□□□ -1.34
CNTN4-201ENST00000397459 ZFP30Q9Y2G7 519 aa6.66□□□□□ -1.34
CNTN4-201ENST00000397459 AMMECR1Q9Y4X0 333 aaPredicted RBP6.66□□□□□ -1.34
CNTN4-201ENST00000397459 GVINP1Q7Z2Y8 2422 aa6.65□□□□□ -1.34
CNTN4-201ENST00000397459 GTF3C1Q12789 2109 aa6.65□□□□□ -1.34
CNTN4-201ENST00000397459 TRAV3A0A0B4J244 114 aa6.65□□□□□ -1.34
CNTN4-201ENST00000397459 SERTM2A0A1B0GWG4 89 aa6.65□□□□□ -1.34
CNTN4-201ENST00000397459 SLC17A3O00476 420 aa6.65□□□□□ -1.34
CNTN4-201ENST00000397459 NUPR1O60356 82 aa6.65□□□□□ -1.34
CNTN4-201ENST00000397459 DEFA4P12838 97 aa6.65□□□□□ -1.34
CNTN4-201ENST00000397459 SPINK2P20155 84 aa6.65□□□□□ -1.34
CNTN4-201ENST00000397459 BMP5P22003 454 aa6.65□□□□□ -1.34
CNTN4-201ENST00000397459 ZNF134P52741 427 aa6.65□□□□□ -1.34
CNTN4-201ENST00000397459 ZNF833PQ6ZTB9 187 aa6.65□□□□□ -1.34
CNTN4-201ENST00000397459 PDPNQ86YL7 162 aa6.65□□□□□ -1.34
CNTN4-201ENST00000397459 LYG1Q8N1E2 194 aa6.65□□□□□ -1.34
CNTN4-201ENST00000397459 THAP8Q8NA92 274 aa6.65□□□□□ -1.34
CNTN4-201ENST00000397459 C9orf106Q8NAJ2 232 aa6.65□□□□□ -1.34
CNTN4-201ENST00000397459 ST6GALNAC3Q8NDV1 305 aa6.65□□□□□ -1.34
CNTN4-201ENST00000397459 OR10X1Q8NGY0 326 aa6.65□□□□□ -1.34
CNTN4-201ENST00000397459 WFDC12Q8WWY7 111 aa6.65□□□□□ -1.34
CNTN4-201ENST00000397459 STARD4Q96DR4 205 aa6.65□□□□□ -1.34
CNTN4-201ENST00000397459 ATG101Q9BSB4 218 aa6.65□□□□□ -1.34
CNTN4-201ENST00000397459 CORTO00230 105 aa6.65□□□□□ -1.35
CNTN4-201ENST00000397459 AGFG2O95081 481 aa6.65□□□□□ -1.35
CNTN4-201ENST00000397459 UBE2L3P68036 154 aaKnown RBP6.65□□□□□ -1.35
CNTN4-201ENST00000397459 LTC4SQ16873 150 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms