RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 TMEM219Q86XT9 240 aa10.38□□□□□ -0.75
SMU1-201ENST00000397149 SMIM8Q96KF7 97 aa10.38□□□□□ -0.75
SMU1-201ENST00000397149 PILRBQ9UKJ0 227 aa10.38□□□□□ -0.75
SMU1-201ENST00000397149 F8VVB4 439 aa10.38□□□□□ -0.75
SMU1-201ENST00000397149 F8VWA3 439 aa10.38□□□□□ -0.75
SMU1-201ENST00000397149 SERF1AO75920 110 aa10.38□□□□□ -0.75
SMU1-201ENST00000397149 C9orf153Q5TBE3 101 aa10.38□□□□□ -0.75
SMU1-201ENST00000397149 NKAPP1Q8N9T2 125 aa10.38□□□□□ -0.75
SMU1-201ENST00000397149 AMELYQ99218 206 aa10.38□□□□□ -0.75
SMU1-201ENST00000397149 NRN1Q9NPD7 142 aa10.38□□□□□ -0.75
SMU1-201ENST00000397149 IZUMO1RA6ND01 250 aa10.37□□□□□ -0.75
SMU1-201ENST00000397149 THAP8Q8NA92 274 aa10.37□□□□□ -0.75
SMU1-201ENST00000397149 CACNA1GO43497 2377 aa10.37□□□□□ -0.75
SMU1-201ENST00000397149 KDM3BQ7LBC6 1761 aa10.37□□□□□ -0.75
SMU1-201ENST00000397149 TRAV40A0A0B4J280 105 aa10.37□□□□□ -0.75
SMU1-201ENST00000397149 SEC11AP67812 179 aa10.37□□□□□ -0.75
SMU1-201ENST00000397149 TMEM174Q8WUU8 243 aa10.37□□□□□ -0.75
SMU1-201ENST00000397149 ZNF561-AS1K7EIQ3 104 aa10.37□□□□□ -0.75
SMU1-201ENST00000397149 UMODP07911 640 aa10.37□□□□□ -0.75
SMU1-201ENST00000397149 DNAJC30Q96LL9 226 aa10.37□□□□□ -0.75
SMU1-201ENST00000397149 LRP6O75581 1613 aa10.37□□□□□ -0.75
SMU1-201ENST00000397149 TRAV9-2A0A087WT02 112 aa10.36□□□□□ -0.75
SMU1-201ENST00000397149 ASCL2Q99929 193 aa10.36□□□□□ -0.75
SMU1-201ENST00000397149 PRDM13Q9H4Q3 707 aa10.36□□□□□ -0.75
SMU1-201ENST00000397149 LOC102723996A0A087X1L8 192 aa10.36□□□□□ -0.75
SMU1-201ENST00000397149 HMGA2P52926 109 aa10.36□□□□□ -0.75
SMU1-201ENST00000397149 ZIC4Q8N9L1 334 aa10.36□□□□□ -0.75
SMU1-201ENST00000397149 TMEM238C9JI98 176 aa10.36□□□□□ -0.75
SMU1-201ENST00000397149 FAM90A26D6RGX4 464 aa10.36□□□□□ -0.75
SMU1-201ENST00000397149 RSPO3Q9BXY4 272 aaPredicted RBP10.36□□□□□ -0.75
SMU1-201ENST00000397149 PLSCR4Q9NRQ2 329 aa10.36□□□□□ -0.75
SMU1-201ENST00000397149 IGKV2-40A0A087WW87 121 aaPredicted RBP10.36□□□□□ -0.75
SMU1-201ENST00000397149 IGKV2D-40P01614 121 aaPredicted RBP10.36□□□□□ -0.75
SMU1-201ENST00000397149 CCL3L1P16619 93 aa10.36□□□□□ -0.75
SMU1-201ENST00000397149 ZCCHC24Q8N2G6 241 aaKnown RBP10.36□□□□□ -0.75
SMU1-201ENST00000397149 C17orf98A8MV24 154 aa10.36□□□□□ -0.75
SMU1-201ENST00000397149 NMBP08949 121 aa10.36□□□□□ -0.75
SMU1-201ENST00000397149 PYYP10082 97 aa10.36□□□□□ -0.75
SMU1-201ENST00000397149 DEFB105AQ8NG35 78 aa10.36□□□□□ -0.75
SMU1-201ENST00000397149 NDUFAF3Q9BU61 184 aa10.36□□□□□ -0.75
SMU1-201ENST00000397149 C5orf66Q9H5L9 145 aa10.36□□□□□ -0.75
SMU1-201ENST00000397149 RPL36AP83881 106 aaKnown RBP10.35□□□□□ -0.75
SMU1-201ENST00000397149 TEX43Q6ZNM6 134 aa10.35□□□□□ -0.75
SMU1-201ENST00000397149 RPL36ALQ969Q0 106 aaKnown RBP10.35□□□□□ -0.75
SMU1-201ENST00000397149 SPXQ9BT56 116 aa10.35□□□□□ -0.75
SMU1-201ENST00000397149 EREGO14944 169 aa10.35□□□□□ -0.75
SMU1-201ENST00000397149 DUSP15Q9H1R2 295 aaPredicted RBP10.35□□□□□ -0.75
SMU1-201ENST00000397149 TFF1P04155 84 aa10.35□□□□□ -0.75
SMU1-201ENST00000397149 PFN2P35080 140 aa10.35□□□□□ -0.75
SMU1-201ENST00000397149 RASL10AQ92737 203 aa10.35□□□□□ -0.75
SMU1-201ENST00000397149 COX14Q96I36 57 aa10.35□□□□□ -0.75
SMU1-201ENST00000397149 RCC1LQ96I51 464 aaKnown RBP10.35□□□□□ -0.75
SMU1-201ENST00000397149 PKIBQ9C010 78 aa10.35□□□□□ -0.75
SMU1-201ENST00000397149 RS1O15537 224 aa10.35□□□□□ -0.75
SMU1-201ENST00000397149 SS18Q15532 418 aa10.35□□□□□ -0.75
SMU1-201ENST00000397149 DANCRP0C864 163 aa10.35□□□□□ -0.75
SMU1-201ENST00000397149 UCP3P55916 312 aa10.35□□□□□ -0.75
SMU1-201ENST00000397149 TAL2Q16559 108 aa10.35□□□□□ -0.75
SMU1-201ENST00000397149 TPTE2P1Q5T6R2 138 aa10.35□□□□□ -0.75
SMU1-201ENST00000397149 LAMB4A4D0S4 1761 aa10.34□□□□□ -0.75
SMU1-201ENST00000397149 CXCL10P02778 98 aa10.34□□□□□ -0.75
SMU1-201ENST00000397149 NDPQ00604 133 aa10.34□□□□□ -0.75
SMU1-201ENST00000397149 TMEM187Q14656 261 aa10.34□□□□□ -0.75
SMU1-201ENST00000397149 SIGLEC15Q6ZMC9 328 aa10.34□□□□□ -0.75
SMU1-201ENST00000397149 PRIMA1Q86XR5 153 aa10.34□□□□□ -0.75
SMU1-201ENST00000397149 C1QAP02745 245 aa10.34□□□□□ -0.75
SMU1-201ENST00000397149 ARFGEF3Q5TH69 2177 aa10.34□□□□□ -0.75
SMU1-201ENST00000397149 MMP23AO75900 390 aa10.34□□□□□ -0.75
SMU1-201ENST00000397149 IGHG3P01860 377 aa10.34□□□□□ -0.75
SMU1-201ENST00000397149 RPL15P61313 204 aaKnown RBP10.34□□□□□ -0.75
SMU1-201ENST00000397149 F5H768 121 aa10.34□□□□□ -0.75
SMU1-201ENST00000397149 FOXS1O43638 330 aa10.34□□□□□ -0.75
SMU1-201ENST00000397149 LY6DQ14210 128 aa10.34□□□□□ -0.75
SMU1-201ENST00000397149 NEU4Q8WWR8 484 aaPredicted RBP10.33□□□□□ -0.76
SMU1-201ENST00000397149 ABCA4P78363 2273 aa10.33□□□□□ -0.76
SMU1-201ENST00000397149 LAGE3Q14657 143 aa10.33□□□□□ -0.76
SMU1-201ENST00000397149 SLC25A28Q96A46 364 aa10.33□□□□□ -0.76
SMU1-201ENST00000397149 PAX8Q06710 450 aa10.33□□□□□ -0.76
SMU1-201ENST00000397149 IFI27L1Q96BM0 104 aa10.33□□□□□ -0.76
SMU1-201ENST00000397149 OTORQ9NRC9 128 aa10.33□□□□□ -0.76
SMU1-201ENST00000397149 COL16A1Q07092 1604 aaPredicted RBP10.33□□□□□ -0.76
SMU1-201ENST00000397149 IGLV3-16A0A075B6K0 115 aa10.33□□□□□ -0.76
SMU1-201ENST00000397149 ACP7Q6ZNF0 438 aa10.33□□□□□ -0.76
SMU1-201ENST00000397149 CACNA1SQ13698 1873 aa10.33□□□□□ -0.76
SMU1-201ENST00000397149 F5P12259 2224 aa10.33□□□□□ -0.76
SMU1-201ENST00000397149 NBR2O15453 112 aa10.33□□□□□ -0.76
SMU1-201ENST00000397149 NXPH4O95158 308 aa10.33□□□□□ -0.76
SMU1-201ENST00000397149 COLQQ9Y215 455 aaPredicted RBP10.33□□□□□ -0.76
SMU1-201ENST00000397149 C9JAW5 83 aa10.33□□□□□ -0.76
SMU1-201ENST00000397149 FCN3O75636 299 aa10.32□□□□□ -0.76
SMU1-201ENST00000397149 ZNF501Q96CX3 271 aaPredicted RBP10.32□□□□□ -0.76
SMU1-201ENST00000397149 PSG8Q9UQ74 426 aa10.32□□□□□ -0.76
SMU1-201ENST00000397149 LHFPL6Q9Y693 200 aa10.32□□□□□ -0.76
SMU1-201ENST00000397149 CD5P06127 495 aa10.32□□□□□ -0.76
SMU1-201ENST00000397149 LINC00518Q8N0U6 118 aa10.32□□□□□ -0.76
SMU1-201ENST00000397149 RNF125Q96EQ8 232 aa10.32□□□□□ -0.76
SMU1-201ENST00000397149 C22orf46C9J442 243 aa10.32□□□□□ -0.76
SMU1-201ENST00000397149 PEBP1P30086 187 aaKnown RBP10.32□□□□□ -0.76
SMU1-201ENST00000397149 HLA-DQB1P01920 261 aa10.32□□□□□ -0.76
SMU1-201ENST00000397149 GATA4P43694 442 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms