RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 IGLC2P0DOY2 106 aa10.88□□□□□ -0.67
TRIM40-207ENST00000396581 IGLC3P0DOY3 106 aa10.88□□□□□ -0.67
TRIM40-207ENST00000396581 AMTP48728 403 aa10.88□□□□□ -0.67
TRIM40-207ENST00000396581 FABP6P51161 128 aa10.88□□□□□ -0.67
TRIM40-207ENST00000396581 CT45A1Q5HYN5 189 aa10.88□□□□□ -0.67
TRIM40-207ENST00000396581 RASL11AQ6T310 242 aa10.88□□□□□ -0.67
TRIM40-207ENST00000396581 GCSAMQ8N6F7 178 aa10.88□□□□□ -0.67
TRIM40-207ENST00000396581 CT45A3Q8NHU0 189 aa10.88□□□□□ -0.67
TRIM40-207ENST00000396581 WIPF2Q8TF74 440 aaPredicted RBP10.88□□□□□ -0.67
TRIM40-207ENST00000396581 ADTRPQ96IZ2 230 aa10.88□□□□□ -0.67
TRIM40-207ENST00000396581 ENY2Q9NPA8 101 aa10.88□□□□□ -0.67
TRIM40-207ENST00000396581 CACNA1DQ01668 2161 aa10.88□□□□□ -0.67
TRIM40-207ENST00000396581 IGF2RP11717 2491 aa10.88□□□□□ -0.67
TRIM40-207ENST00000396581 ATMQ13315 3056 aa10.88□□□□□ -0.67
TRIM40-207ENST00000396581 IGKV1OR2-108A0A075B7D4 117 aa10.88□□□□□ -0.67
TRIM40-207ENST00000396581 DLL1O00548 723 aa10.88□□□□□ -0.67
TRIM40-207ENST00000396581 SAA2P0DJI9 122 aaPredicted RBP10.88□□□□□ -0.67
TRIM40-207ENST00000396581 HOXC12P31275 282 aa10.88□□□□□ -0.67
TRIM40-207ENST00000396581 KIR2DL2P43627 348 aaPredicted RBP10.88□□□□□ -0.67
TRIM40-207ENST00000396581 SUMO1P63165 101 aaKnown RBP10.88□□□□□ -0.67
TRIM40-207ENST00000396581 PRCDQ00LT1 54 aa10.88□□□□□ -0.67
TRIM40-207ENST00000396581 SPATA45Q537H7 98 aa10.88□□□□□ -0.67
TRIM40-207ENST00000396581 C19orf35Q6ZS72 473 aa10.88□□□□□ -0.67
TRIM40-207ENST00000396581 MRPL27Q9P0M9 148 aaKnown RBP10.88□□□□□ -0.67
TRIM40-207ENST00000396581 PRNDQ9UKY0 176 aa10.88□□□□□ -0.67
TRIM40-207ENST00000396581 FZR1Q9UM11 496 aa10.88□□□□□ -0.67
TRIM40-207ENST00000396581 IGHV2OR16-5A0A0B4J2B6 119 aa10.87□□□□□ -0.67
TRIM40-207ENST00000396581 IZUMO1RA6ND01 250 aa10.87□□□□□ -0.67
TRIM40-207ENST00000396581 TAS2R45P59539 299 aa10.87□□□□□ -0.67
TRIM40-207ENST00000396581 UTF1Q5T230 341 aa10.87□□□□□ -0.67
TRIM40-207ENST00000396581 C9orf106Q8NAJ2 232 aa10.87□□□□□ -0.67
TRIM40-207ENST00000396581 FAM103A1Q9BTL3 118 aaKnown RBP10.87□□□□□ -0.67
TRIM40-207ENST00000396581 COMMD5Q9GZQ3 224 aa10.87□□□□□ -0.67
TRIM40-207ENST00000396581 RAB9BQ9NP90 201 aa10.87□□□□□ -0.67
TRIM40-207ENST00000396581 CDC42EP3Q9UKI2 254 aa10.87□□□□□ -0.67
TRIM40-207ENST00000396581 OR51B2Q9Y5P1 312 aa10.87□□□□□ -0.67
TRIM40-207ENST00000396581 HYPMO75409 117 aa10.86□□□□□ -0.67
TRIM40-207ENST00000396581 ACTL6BO94805 426 aa10.86□□□□□ -0.67
TRIM40-207ENST00000396581 LHBP01229 141 aa10.86□□□□□ -0.67
TRIM40-207ENST00000396581 C3orf79P0CE67 100 aa10.86□□□□□ -0.67
TRIM40-207ENST00000396581 SRIP30626 198 aa10.86□□□□□ -0.67
TRIM40-207ENST00000396581 C2orf83Q53S99 150 aa10.86□□□□□ -0.67
TRIM40-207ENST00000396581 IBA57Q5T440 356 aaKnown RBP10.86□□□□□ -0.67
TRIM40-207ENST00000396581 FAM169BQ8N8A8 192 aa10.86□□□□□ -0.67
TRIM40-207ENST00000396581 ZNF439Q8NDP4 499 aa10.86□□□□□ -0.67
TRIM40-207ENST00000396581 MBD6Q96DN6 1003 aa10.86□□□□□ -0.67
TRIM40-207ENST00000396581 STARD4Q96DR4 205 aa10.86□□□□□ -0.67
TRIM40-207ENST00000396581 IGHV1-18A0A0C4DH31 117 aa10.86□□□□□ -0.67
TRIM40-207ENST00000396581 PSMB11A5LHX3 300 aa10.86□□□□□ -0.67
TRIM40-207ENST00000396581 TBR1Q16650 682 aa10.86□□□□□ -0.67
TRIM40-207ENST00000396581 KIAA1644Q3SXP7 199 aa10.86□□□□□ -0.67
TRIM40-207ENST00000396581 FAM231DQ6ZW35 169 aa10.86□□□□□ -0.67
TRIM40-207ENST00000396581 TSKUQ8WUA8 353 aa10.86□□□□□ -0.67
TRIM40-207ENST00000396581 SLC25A33Q9BSK2 321 aa10.86□□□□□ -0.67
TRIM40-207ENST00000396581 TLN1Q9Y490 2541 aaKnown RBP10.86□□□□□ -0.67
TRIM40-207ENST00000396581 KBTBD11-OT1A0A1B0GTJ5 212 aa10.85□□□□□ -0.67
TRIM40-207ENST00000396581 J3QR06 171 aa10.85□□□□□ -0.67
TRIM40-207ENST00000396581 UPK2O00526 184 aa10.85□□□□□ -0.67
TRIM40-207ENST00000396581 IGHV3-13P01766 116 aa10.85□□□□□ -0.67
TRIM40-207ENST00000396581 IGHV3-7P01780 117 aa10.85□□□□□ -0.67
TRIM40-207ENST00000396581 C8orf88P0DMB2 117 aa10.85□□□□□ -0.67
TRIM40-207ENST00000396581 FXYD3Q14802 87 aa10.85□□□□□ -0.67
TRIM40-207ENST00000396581 MMDQ15546 238 aa10.85□□□□□ -0.67
TRIM40-207ENST00000396581 ZNRF1Q8ND25 227 aa10.85□□□□□ -0.67
TRIM40-207ENST00000396581 OR2Z1Q8NG97 314 aa10.85□□□□□ -0.67
TRIM40-207ENST00000396581 OR1L8Q8NGR8 309 aa10.85□□□□□ -0.67
TRIM40-207ENST00000396581 MRPL32Q9BYC8 188 aaKnown RBP10.85□□□□□ -0.67
TRIM40-207ENST00000396581 PLEKHA3Q9HB20 300 aa10.85□□□□□ -0.67
TRIM40-207ENST00000396581 PLSCR4Q9NRQ2 329 aa10.85□□□□□ -0.67
TRIM40-207ENST00000396581 INTS1Q8N201 2190 aaKnown RBP10.85□□□□□ -0.67
TRIM40-207ENST00000396581 MBD3L4A6NDZ8 208 aaPredicted RBP10.85□□□□□ -0.67
TRIM40-207ENST00000396581 MBD3L3A6NE82 208 aaPredicted RBP10.85□□□□□ -0.67
TRIM40-207ENST00000396581 DPRXA6NFQ7 191 aa10.85□□□□□ -0.67
TRIM40-207ENST00000396581 MBD3L5A6NJ08 208 aaPredicted RBP10.85□□□□□ -0.67
TRIM40-207ENST00000396581 SPINK4O60575 86 aa10.85□□□□□ -0.67
TRIM40-207ENST00000396581 MYOD1P15172 320 aa10.85□□□□□ -0.67
TRIM40-207ENST00000396581 SELENOVP59797 346 aa10.85□□□□□ -0.67
TRIM40-207ENST00000396581 MSMPQ1L6U9 139 aa10.85□□□□□ -0.67
TRIM40-207ENST00000396581 VWA1Q6PCB0 445 aa10.85□□□□□ -0.67
TRIM40-207ENST00000396581 SEM1Q6ZVN7 128 aa10.85□□□□□ -0.67
TRIM40-207ENST00000396581 CNEP1R1Q8N9A8 125 aa10.85□□□□□ -0.67
TRIM40-207ENST00000396581 MBD3L2Q8NHZ7 208 aaPredicted RBP10.85□□□□□ -0.67
TRIM40-207ENST00000396581 FAM167A-AS1Q96KT0 104 aa10.85□□□□□ -0.67
TRIM40-207ENST00000396581 LINC00574Q9H8X3 128 aa10.85□□□□□ -0.67
TRIM40-207ENST00000396581 CBY1Q9Y3M2 126 aa10.85□□□□□ -0.67
TRIM40-207ENST00000396581 OR7C2O60412 319 aa10.84□□□□□ -0.67
TRIM40-207ENST00000396581 NDUFB8O95169 186 aa10.84□□□□□ -0.67
TRIM40-207ENST00000396581 APCSP02743 223 aa10.84□□□□□ -0.67
TRIM40-207ENST00000396581 PMCHP20382 165 aa10.84□□□□□ -0.67
TRIM40-207ENST00000396581 CHRNB4P30926 498 aa10.84□□□□□ -0.67
TRIM40-207ENST00000396581 KLF5Q13887 457 aaPredicted RBP10.84□□□□□ -0.67
TRIM40-207ENST00000396581 BATFQ16520 125 aa10.84□□□□□ -0.67
TRIM40-207ENST00000396581 MOB3BQ86TA1 216 aa10.84□□□□□ -0.67
TRIM40-207ENST00000396581 KLHDC1Q8N7A1 406 aa10.84□□□□□ -0.67
TRIM40-207ENST00000396581 C18orf32Q8TCD1 76 aa10.84□□□□□ -0.67
TRIM40-207ENST00000396581 FAM222BQ8WU58 562 aa10.84□□□□□ -0.67
TRIM40-207ENST00000396581 BSNQ9UPA5 3926 aa10.83□□□□□ -0.68
TRIM40-207ENST00000396581 IGHV3OR15-7A0A075B7D8 119 aa10.83□□□□□ -0.68
TRIM40-207ENST00000396581 TFPI2P48307 235 aa10.83□□□□□ -0.68
TRIM40-207ENST00000396581 SLC35B1P78383 322 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms