RNA–Protein interactions for RNA: ENST00000396542.5

TNFSF13-204, Transcript of TNF superfamily member 13, humanhuman

TSL 3 BASIC

Gene TNFSF13, Length 726 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-204ENST00000396542 RNASE2P10153 161 aaKnown RBP13.59□□□□□ -0.23
TNFSF13-204ENST00000396542 SLC25A6P12236 298 aa13.59□□□□□ -0.23
TNFSF13-204ENST00000396542 ARL3P36405 182 aa13.59□□□□□ -0.23
TNFSF13-204ENST00000396542 SNCAP37840 140 aa13.59□□□□□ -0.23
TNFSF13-204ENST00000396542 SYNJ2BPP57105 145 aa13.59□□□□□ -0.23
TNFSF13-204ENST00000396542 KRTAP10-11P60412 298 aa13.59□□□□□ -0.23
TNFSF13-204ENST00000396542 OR9G4Q8NGQ1 327 aa13.59□□□□□ -0.23
TNFSF13-204ENST00000396542 SCARB1Q8WTV0 552 aa13.59□□□□□ -0.23
TNFSF13-204ENST00000396542 ENY2Q9NPA8 101 aa13.59□□□□□ -0.23
TNFSF13-204ENST00000396542 F8W735 103 aaPredicted RBP13.58□□□□□ -0.24
TNFSF13-204ENST00000396542 C4orf46Q504U0 113 aa13.58□□□□□ -0.24
TNFSF13-204ENST00000396542 MZT2BQ6NZ67 158 aa13.58□□□□□ -0.24
TNFSF13-204ENST00000396542 IL34Q6ZMJ4 242 aa13.58□□□□□ -0.24
TNFSF13-204ENST00000396542 C21orf62Q9NYP8 219 aa13.58□□□□□ -0.24
TNFSF13-204ENST00000396542 SAP30O75446 220 aa13.57□□□□□ -0.24
TNFSF13-204ENST00000396542 FCGR2BP31994 310 aaPredicted RBP13.57□□□□□ -0.24
TNFSF13-204ENST00000396542 GPR183P32249 361 aa13.57□□□□□ -0.24
TNFSF13-204ENST00000396542 TNFRSF9Q07011 255 aa13.57□□□□□ -0.24
TNFSF13-204ENST00000396542 TATDN3Q17R31 274 aa13.57□□□□□ -0.24
TNFSF13-204ENST00000396542 REC114Q7Z4M0 266 aa13.57□□□□□ -0.24
TNFSF13-204ENST00000396542 GPHB5Q86YW7 130 aa13.57□□□□□ -0.24
TNFSF13-204ENST00000396542 COQ8AQ8NI60 647 aa13.57□□□□□ -0.24
TNFSF13-204ENST00000396542 MISP3Q96FF7 219 aa13.57□□□□□ -0.24
TNFSF13-204ENST00000396542 NUDT15Q9NV35 164 aa13.57□□□□□ -0.24
TNFSF13-204ENST00000396542 AURKAIP1Q9NWT8 199 aaPredicted RBP13.57□□□□□ -0.24
TNFSF13-204ENST00000396542 TRAV6A0A075B6T7 132 aa13.56□□□□□ -0.24
TNFSF13-204ENST00000396542 IGHV3-21A0A0B4J1V1 117 aa13.56□□□□□ -0.24
TNFSF13-204ENST00000396542 FAM240BA0A1B0GVZ2 78 aa13.56□□□□□ -0.24
TNFSF13-204ENST00000396542 LGALS9O00182 355 aa13.56□□□□□ -0.24
TNFSF13-204ENST00000396542 CORTO00230 105 aa13.56□□□□□ -0.24
TNFSF13-204ENST00000396542 OR2C1O95371 312 aa13.56□□□□□ -0.24
TNFSF13-204ENST00000396542 MT-CO2P00403 227 aa13.56□□□□□ -0.24
TNFSF13-204ENST00000396542 PRB2P02812 416 aaPredicted RBP13.56□□□□□ -0.24
TNFSF13-204ENST00000396542 HOXB5P09067 269 aa13.56□□□□□ -0.24
TNFSF13-204ENST00000396542 HTR2BP41595 481 aa13.56□□□□□ -0.24
TNFSF13-204ENST00000396542 SUB1P53999 127 aaKnown RBP eCLIP13.56□□□□□ -0.24
TNFSF13-204ENST00000396542 GGNBP1Q5YKI7 109 aa13.56□□□□□ -0.24
TNFSF13-204ENST00000396542 OR1S1Q8NH92 325 aa13.56□□□□□ -0.24
TNFSF13-204ENST00000396542 MITD1Q8WV92 249 aa13.56□□□□□ -0.24
TNFSF13-204ENST00000396542 BSCL2Q96G97 398 aaPredicted RBP13.56□□□□□ -0.24
TNFSF13-204ENST00000396542 ELOVL1Q9BW60 279 aa13.56□□□□□ -0.24
TNFSF13-204ENST00000396542 HEYLQ9NQ87 328 aaPredicted RBP13.56□□□□□ -0.24
TNFSF13-204ENST00000396542 SIGLEC8Q9NYZ4 499 aa13.56□□□□□ -0.24
TNFSF13-204ENST00000396542 ZMAT5Q9UDW3 170 aaKnown RBP13.56□□□□□ -0.24
TNFSF13-204ENST00000396542 CEBPZOSA8MTT3 80 aa13.55□□□□□ -0.24
TNFSF13-204ENST00000396542 TGOLN2O43493 480 aa13.55□□□□□ -0.24
TNFSF13-204ENST00000396542 NXPH3O95157 252 aa13.55□□□□□ -0.24
TNFSF13-204ENST00000396542 C2orf83Q53S99 150 aa13.55□□□□□ -0.24
TNFSF13-204ENST00000396542 OR4C12Q96R67 309 aa13.55□□□□□ -0.24
TNFSF13-204ENST00000396542 TXN2Q99757 166 aa13.55□□□□□ -0.24
TNFSF13-204ENST00000396542 RBKSQ9H477 322 aa13.55□□□□□ -0.24
TNFSF13-204ENST00000396542 OR2T8A6NH00 312 aa13.54□□□□□ -0.24
TNFSF13-204ENST00000396542 FAM90A26D6RGX4 464 aa13.54□□□□□ -0.24
TNFSF13-204ENST00000396542 ADAP1O75689 374 aa13.54□□□□□ -0.24
TNFSF13-204ENST00000396542 CSN3P07498 182 aa13.54□□□□□ -0.24
TNFSF13-204ENST00000396542 H2AFB2P0C5Z0 115 aa13.54□□□□□ -0.24
TNFSF13-204ENST00000396542 C11orf87Q6NUJ2 197 aa13.54□□□□□ -0.24
TNFSF13-204ENST00000396542 SPSB3Q6PJ21 355 aa13.54□□□□□ -0.24
TNFSF13-204ENST00000396542 PLET1Q6UQ28 207 aa13.54□□□□□ -0.24
TNFSF13-204ENST00000396542 SLC24A4Q8NFF2 622 aa13.54□□□□□ -0.24
TNFSF13-204ENST00000396542 OR52B4Q8NGK2 314 aa13.54□□□□□ -0.24
TNFSF13-204ENST00000396542 DTD1Q8TEA8 209 aa13.54□□□□□ -0.24
TNFSF13-204ENST00000396542 TMEM170AQ8WVE7 144 aa13.54□□□□□ -0.24
TNFSF13-204ENST00000396542 PINX1Q96BK5 328 aaKnown RBP13.54□□□□□ -0.24
TNFSF13-204ENST00000396542 HIPK2Q9H2X6 1198 aa13.54□□□□□ -0.24
TNFSF13-204ENST00000396542 ZC4H2Q9NQZ6 224 aa13.54□□□□□ -0.24
TNFSF13-204ENST00000396542 GAR1Q9NY12 217 aaKnown RBP13.54□□□□□ -0.24
TNFSF13-204ENST00000396542 PEMTQ9UBM1 199 aa13.54□□□□□ -0.24
TNFSF13-204ENST00000396542 PRKDCP78527 4128 aaKnown RBP13.54□□□□□ -0.24
TNFSF13-204ENST00000396542 A8MWP6 167 aa13.53□□□□□ -0.24
TNFSF13-204ENST00000396542 IGLV1-51P01701 117 aa13.53□□□□□ -0.24
TNFSF13-204ENST00000396542 CTSGP08311 255 aa13.53□□□□□ -0.24
TNFSF13-204ENST00000396542 ADMP35318 185 aa13.53□□□□□ -0.24
TNFSF13-204ENST00000396542 MFAP4P55083 255 aa13.53□□□□□ -0.24
TNFSF13-204ENST00000396542 DUSP18Q8NEJ0 188 aa13.53□□□□□ -0.24
TNFSF13-204ENST00000396542 CHRDL1Q9BU40 450 aa13.53□□□□□ -0.24
TNFSF13-204ENST00000396542 ZNF436Q9C0F3 470 aaPredicted RBP13.53□□□□□ -0.24
TNFSF13-204ENST00000396542 MPTX1A8MV57 137 aa13.52□□□□□ -0.25
TNFSF13-204ENST00000396542 FAM106AQ4KMX7 169 aa13.52□□□□□ -0.25
TNFSF13-204ENST00000396542 Q56UQ5 140 aa13.52□□□□□ -0.25
TNFSF13-204ENST00000396542 ADAMTSL5Q6ZMM2 481 aa13.52□□□□□ -0.25
TNFSF13-204ENST00000396542 UBAC2Q8NBM4 344 aa13.52□□□□□ -0.25
TNFSF13-204ENST00000396542 ENKURQ8TC29 256 aa13.52□□□□□ -0.25
TNFSF13-204ENST00000396542 ZNF414Q96IQ9 312 aa13.52□□□□□ -0.25
TNFSF13-204ENST00000396542 FNDC4Q9H6D8 234 aaPredicted RBP13.52□□□□□ -0.25
TNFSF13-204ENST00000396542 U3KQ87 197 aa13.52□□□□□ -0.25
TNFSF13-204ENST00000396542 WI2-2373I1.2A0A1W2PRP0 233 aa13.51□□□□□ -0.25
TNFSF13-204ENST00000396542 IFNA21P01568 189 aa13.51□□□□□ -0.25
TNFSF13-204ENST00000396542 IGHV3-48P01763 117 aa13.51□□□□□ -0.25
TNFSF13-204ENST00000396542 NPY1RP25929 384 aa13.51□□□□□ -0.25
TNFSF13-204ENST00000396542 UNQ9165/PRO28630Q6UXU0 137 aa13.51□□□□□ -0.25
TNFSF13-204ENST00000396542 NRARPQ7Z6K4 114 aa13.51□□□□□ -0.25
TNFSF13-204ENST00000396542 RNASEH2CQ8TDP1 164 aaKnown RBP13.51□□□□□ -0.25
TNFSF13-204ENST00000396542 ZNF431Q8TF32 576 aaPredicted RBP13.51□□□□□ -0.25
TNFSF13-204ENST00000396542 SEC22CQ9BRL7 303 aa13.51□□□□□ -0.25
TNFSF13-204ENST00000396542 ZNF256Q9Y2P7 627 aaPredicted RBP13.51□□□□□ -0.25
TNFSF13-204ENST00000396542 TMEM213A2RRL7 107 aa13.5□□□□□ -0.25
TNFSF13-204ENST00000396542 C2orf70A6NJV1 201 aa13.5□□□□□ -0.25
TNFSF13-204ENST00000396542 K7EIL1 84 aa13.5□□□□□ -0.25
TNFSF13-204ENST00000396542 ATP5IP56385 69 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms