RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 MGAQ8IWI9 3026 aa11.75□□□□□ -0.53
CLIP2-203ENST00000395060 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.75□□□□□ -0.53
CLIP2-203ENST00000395060 C15orf65H3BRN8 121 aa11.75□□□□□ -0.53
CLIP2-203ENST00000395060 TOX4O94842 621 aa11.75□□□□□ -0.53
CLIP2-203ENST00000395060 VAMP3Q15836 100 aa11.75□□□□□ -0.53
CLIP2-203ENST00000395060 TMEM164Q5U3C3 297 aa11.75□□□□□ -0.53
CLIP2-203ENST00000395060 OR2D3Q8NGH3 330 aa11.75□□□□□ -0.53
CLIP2-203ENST00000395060 TRIB1Q96RU8 372 aa11.75□□□□□ -0.53
CLIP2-203ENST00000395060 TECRQ9NZ01 308 aaKnown RBP11.75□□□□□ -0.53
CLIP2-203ENST00000395060 SP9P0CG40 484 aa11.74□□□□□ -0.53
CLIP2-203ENST00000395060 APELAP0DMC3 54 aa11.74□□□□□ -0.53
CLIP2-203ENST00000395060 GNG5P63218 68 aa11.74□□□□□ -0.53
CLIP2-203ENST00000395060 SMIM21Q3B7S5 101 aa11.74□□□□□ -0.53
CLIP2-203ENST00000395060 FAM214BQ7L5A3 538 aa11.74□□□□□ -0.53
CLIP2-203ENST00000395060 ZNF503Q96F45 646 aa11.74□□□□□ -0.53
CLIP2-203ENST00000395060 LSM4Q9Y4Z0 139 aaKnown RBP11.74□□□□□ -0.53
CLIP2-203ENST00000395060 PRRX1P54821 245 aa11.74□□□□□ -0.53
CLIP2-203ENST00000395060 PTPRZ1P23471 2315 aaPredicted RBP11.74□□□□□ -0.53
CLIP2-203ENST00000395060 TNFSF15O95150 251 aa11.73□□□□□ -0.53
CLIP2-203ENST00000395060 AMY1AP04745 511 aa11.73□□□□□ -0.53
CLIP2-203ENST00000395060 HOXC12P31275 282 aa11.73□□□□□ -0.53
CLIP2-203ENST00000395060 ZNF137PP52743 207 aa11.73□□□□□ -0.53
CLIP2-203ENST00000395060 LEMD1Q68G75 181 aa11.73□□□□□ -0.53
CLIP2-203ENST00000395060 EBLN2Q6P2I7 272 aa11.73□□□□□ -0.53
CLIP2-203ENST00000395060 OR2T6Q8NHC8 308 aa11.73□□□□□ -0.53
CLIP2-203ENST00000395060 SNRNP40Q96DI7 357 aaKnown RBP11.73□□□□□ -0.53
CLIP2-203ENST00000395060 ARL2-SNX15V9GYD0 113 aa11.73□□□□□ -0.53
CLIP2-203ENST00000395060 CBY3A6NI87 242 aa11.73□□□□□ -0.53
CLIP2-203ENST00000395060 IQCF6A8MYZ5 107 aa11.73□□□□□ -0.53
CLIP2-203ENST00000395060 ESDP10768 282 aa11.73□□□□□ -0.53
CLIP2-203ENST00000395060 IGLL1P15814 213 aa11.73□□□□□ -0.53
CLIP2-203ENST00000395060 UBE2L3P68036 154 aaKnown RBP11.73□□□□□ -0.53
CLIP2-203ENST00000395060 SSBP2P81877 361 aaPredicted RBP11.73□□□□□ -0.53
CLIP2-203ENST00000395060 SPATA12Q7Z6I5 190 aa11.73□□□□□ -0.53
CLIP2-203ENST00000395060 OR4C5Q8NGB2 326 aa11.73□□□□□ -0.53
CLIP2-203ENST00000395060 C18orf32Q8TCD1 76 aa11.73□□□□□ -0.53
CLIP2-203ENST00000395060 OR8B2Q96RD0 313 aa11.73□□□□□ -0.53
CLIP2-203ENST00000395060 ABI3Q9P2A4 366 aa11.73□□□□□ -0.53
CLIP2-203ENST00000395060 INTS1Q8N201 2190 aaKnown RBP11.73□□□□□ -0.53
CLIP2-203ENST00000395060 M0R296 226 aa11.73□□□□□ -0.53
CLIP2-203ENST00000395060 SNAI2O43623 268 aa11.73□□□□□ -0.53
CLIP2-203ENST00000395060 IGKV1-16P04430 117 aa11.73□□□□□ -0.53
CLIP2-203ENST00000395060 LINC00869P0C866 280 aa11.73□□□□□ -0.53
CLIP2-203ENST00000395060 REG1BP48304 166 aa11.73□□□□□ -0.53
CLIP2-203ENST00000395060 GDF5OSQ5U4N7 250 aa11.73□□□□□ -0.53
CLIP2-203ENST00000395060 VWA1Q6PCB0 445 aa11.73□□□□□ -0.53
CLIP2-203ENST00000395060 LINC00173Q6ZV60 143 aa11.73□□□□□ -0.53
CLIP2-203ENST00000395060 TCTEX1D1Q8N7M0 179 aa11.73□□□□□ -0.53
CLIP2-203ENST00000395060 BLNKQ8WV28 456 aa11.73□□□□□ -0.53
CLIP2-203ENST00000395060 CXXC4Q9H2H0 198 aa11.73□□□□□ -0.53
CLIP2-203ENST00000395060 OR51B2Q9Y5P1 312 aa11.73□□□□□ -0.53
CLIP2-203ENST00000395060 IGKV1D-17A0A075B6S4 117 aa11.72□□□□□ -0.53
CLIP2-203ENST00000395060 SAA2-SAA4A0A096LPE2 208 aa11.72□□□□□ -0.53
CLIP2-203ENST00000395060 TRGV5A0A0B4J1U4 118 aa11.72□□□□□ -0.53
CLIP2-203ENST00000395060 J3QR06 171 aa11.72□□□□□ -0.53
CLIP2-203ENST00000395060 SP1P08047 785 aa11.72□□□□□ -0.53
CLIP2-203ENST00000395060 SAA2P0DJI9 122 aaPredicted RBP11.72□□□□□ -0.53
CLIP2-203ENST00000395060 CD59P13987 128 aa11.72□□□□□ -0.53
CLIP2-203ENST00000395060 IFI27L2Q9H2X8 130 aa11.72□□□□□ -0.53
CLIP2-203ENST00000395060 hDV102S1A0JD36 115 aa11.72□□□□□ -0.53
CLIP2-203ENST00000395060 CDX4O14627 284 aaPredicted RBP11.72□□□□□ -0.53
CLIP2-203ENST00000395060 SPRY3O43610 288 aa11.72□□□□□ -0.53
CLIP2-203ENST00000395060 ZNF138P52744 262 aa11.72□□□□□ -0.53
CLIP2-203ENST00000395060 WDR73Q6P4I2 378 aa11.72□□□□□ -0.53
CLIP2-203ENST00000395060 HES4Q9HCC6 221 aa11.72□□□□□ -0.53
CLIP2-203ENST00000395060 PCNX1Q96RV3 2341 aa11.72□□□□□ -0.53
CLIP2-203ENST00000395060 ZFHX2Q9C0A1 2572 aaPredicted RBP11.72□□□□□ -0.53
CLIP2-203ENST00000395060 IGHV3-21A0A0B4J1V1 117 aa11.71□□□□□ -0.53
CLIP2-203ENST00000395060 C9JCJ5 164 aa11.71□□□□□ -0.53
CLIP2-203ENST00000395060 TCF24Q7RTU0 167 aa11.71□□□□□ -0.53
CLIP2-203ENST00000395060 ALKBH7Q9BT30 221 aaPredicted RBP11.71□□□□□ -0.53
CLIP2-203ENST00000395060 MOGAT3Q86VF5 341 aa11.71□□□□□ -0.53
CLIP2-203ENST00000395060 SPACA3Q8IXA5 215 aa11.71□□□□□ -0.53
CLIP2-203ENST00000395060 ASCL2Q99929 193 aa11.71□□□□□ -0.53
CLIP2-203ENST00000395060 BET1LQ9NYM9 111 aa11.71□□□□□ -0.53
CLIP2-203ENST00000395060 C15orf61A6NNL5 157 aa11.71□□□□□ -0.54
CLIP2-203ENST00000395060 IGLV2-8P01709 118 aa11.71□□□□□ -0.54
CLIP2-203ENST00000395060 ADH4P08319 380 aa11.71□□□□□ -0.54
CLIP2-203ENST00000395060 AREGP15514 252 aa11.71□□□□□ -0.54
CLIP2-203ENST00000395060 CT45A1Q5HYN5 189 aa11.71□□□□□ -0.54
CLIP2-203ENST00000395060 CT45A3Q8NHU0 189 aa11.71□□□□□ -0.54
CLIP2-203ENST00000395060 LOXL4Q96JB6 756 aa11.71□□□□□ -0.54
CLIP2-203ENST00000395060 TXNDC17Q9BRA2 123 aa11.71□□□□□ -0.54
CLIP2-203ENST00000395060 WASHC3Q9Y3C0 194 aa11.71□□□□□ -0.54
CLIP2-203ENST00000395060 CECR9P0C854 216 aa11.7□□□□□ -0.54
CLIP2-203ENST00000395060 CA7P43166 264 aa11.7□□□□□ -0.54
CLIP2-203ENST00000395060 HSPE1P61604 102 aaKnown RBP11.7□□□□□ -0.54
CLIP2-203ENST00000395060 RBX1P62877 108 aa11.7□□□□□ -0.54
CLIP2-203ENST00000395060 MPV17L2Q567V2 206 aa11.7□□□□□ -0.54
CLIP2-203ENST00000395060 ZNF841Q6ZN19 808 aa11.7□□□□□ -0.54
CLIP2-203ENST00000395060 KLHDC1Q8N7A1 406 aa11.7□□□□□ -0.54
CLIP2-203ENST00000395060 ZNF738Q8NE65 137 aa11.7□□□□□ -0.54
CLIP2-203ENST00000395060 HLA-DQA1P01909 254 aa11.7□□□□□ -0.54
CLIP2-203ENST00000395060 CSN3P07498 182 aa11.7□□□□□ -0.54
CLIP2-203ENST00000395060 RPL19P84098 196 aaKnown RBP11.7□□□□□ -0.54
CLIP2-203ENST00000395060 OR10J3Q5JRS4 329 aa11.7□□□□□ -0.54
CLIP2-203ENST00000395060 OR4S2Q8NH73 311 aa11.7□□□□□ -0.54
CLIP2-203ENST00000395060 C22orf15Q8WYQ4 148 aa11.7□□□□□ -0.54
CLIP2-203ENST00000395060 NEUROG1Q92886 237 aa11.7□□□□□ -0.54
CLIP2-203ENST00000395060 C11orf52Q96A22 123 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms