RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 ZNF90Q03938 601 aa12.93□□□□□ -0.34
SMARCD1-202ENST00000394963 MALSU1Q96EH3 234 aa12.93□□□□□ -0.34
SMARCD1-202ENST00000394963 FAM210BQ96KR6 192 aa12.93□□□□□ -0.34
SMARCD1-202ENST00000394963 TRAV34A0A0B4J273 112 aa12.93□□□□□ -0.34
SMARCD1-202ENST00000394963 H0YJW9 148 aa12.93□□□□□ -0.34
SMARCD1-202ENST00000394963 CLDN34H7C241 214 aa12.93□□□□□ -0.34
SMARCD1-202ENST00000394963 CFHR2P36980 270 aa12.93□□□□□ -0.34
SMARCD1-202ENST00000394963 ATP5J2P56134 94 aa12.93□□□□□ -0.34
SMARCD1-202ENST00000394963 MEF2CQ06413 473 aaPredicted RBP12.93□□□□□ -0.34
SMARCD1-202ENST00000394963 C16orf82Q7Z2V1 217 aa12.93□□□□□ -0.34
SMARCD1-202ENST00000394963 OR5AU1Q8NGC0 362 aa12.93□□□□□ -0.34
SMARCD1-202ENST00000394963 MGST2Q99735 147 aa12.93□□□□□ -0.34
SMARCD1-202ENST00000394963 E7EUB6 86 aa12.92□□□□□ -0.34
SMARCD1-202ENST00000394963 CBLN4Q9NTU7 201 aa12.92□□□□□ -0.34
SMARCD1-202ENST00000394963 COA4Q9NYJ1 87 aa12.92□□□□□ -0.34
SMARCD1-202ENST00000394963 LOC105371267A0A1B0GV96 52 aa12.92□□□□□ -0.34
SMARCD1-202ENST00000394963 A0A1W2PN81 502 aa12.92□□□□□ -0.34
SMARCD1-202ENST00000394963 SCO2A0A1W2PP80 73 aa12.92□□□□□ -0.34
SMARCD1-202ENST00000394963 GALR1P47211 349 aa12.92□□□□□ -0.34
SMARCD1-202ENST00000394963 FXYD3Q14802 87 aa12.92□□□□□ -0.34
SMARCD1-202ENST00000394963 ZNF596Q8TC21 504 aa12.92□□□□□ -0.34
SMARCD1-202ENST00000394963 BPESC1Q9GZL8 116 aa12.92□□□□□ -0.34
SMARCD1-202ENST00000394963 FCN1O00602 326 aa12.92□□□□□ -0.34
SMARCD1-202ENST00000394963 NDUFA2O43678 99 aa12.92□□□□□ -0.34
SMARCD1-202ENST00000394963 PYYP10082 97 aa12.92□□□□□ -0.34
SMARCD1-202ENST00000394963 USF1P22415 310 aaPredicted RBP12.91□□□□□ -0.34
SMARCD1-202ENST00000394963 FAM222BQ8WU58 562 aa12.91□□□□□ -0.34
SMARCD1-202ENST00000394963 CORO2AQ92828 525 aa12.91□□□□□ -0.34
SMARCD1-202ENST00000394963 SLC25A33Q9BSK2 321 aa12.91□□□□□ -0.34
SMARCD1-202ENST00000394963 GGTLC1Q9BX51 225 aa12.91□□□□□ -0.34
SMARCD1-202ENST00000394963 USP24Q9UPU5 2620 aa12.91□□□□□ -0.34
SMARCD1-202ENST00000394963 C22orf46C9J442 243 aa12.91□□□□□ -0.34
SMARCD1-202ENST00000394963 SIAH2O43255 324 aa12.91□□□□□ -0.34
SMARCD1-202ENST00000394963 RPL11P62913 178 aaKnown RBP12.91□□□□□ -0.34
SMARCD1-202ENST00000394963 BRD3OSQ6XYD6 125 aa12.91□□□□□ -0.34
SMARCD1-202ENST00000394963 PSMG3Q9BT73 122 aaPredicted RBP12.91□□□□□ -0.34
SMARCD1-202ENST00000394963 OR5I1Q13606 314 aa12.91□□□□□ -0.34
SMARCD1-202ENST00000394963 DMRTC2Q8IXT2 367 aaPredicted RBP12.91□□□□□ -0.34
SMARCD1-202ENST00000394963 ELOVL1Q9BW60 279 aa12.91□□□□□ -0.34
SMARCD1-202ENST00000394963 MIOXQ9UGB7 285 aa12.91□□□□□ -0.34
SMARCD1-202ENST00000394963 FLI1Q01543 452 aaPredicted RBP12.9□□□□□ -0.34
SMARCD1-202ENST00000394963 MRPL41Q8IXM3 137 aaKnown RBP12.9□□□□□ -0.34
SMARCD1-202ENST00000394963 OSR1Q8TAX0 266 aaPredicted RBP12.9□□□□□ -0.34
SMARCD1-202ENST00000394963 ASCL2Q99929 193 aa12.9□□□□□ -0.34
SMARCD1-202ENST00000394963 WDR83OSQ9Y284 106 aa12.9□□□□□ -0.34
SMARCD1-202ENST00000394963 ZNF506Q5JVG8 444 aa12.9□□□□□ -0.34
SMARCD1-202ENST00000394963 TMEM68Q96MH6 324 aa12.9□□□□□ -0.34
SMARCD1-202ENST00000394963 KCNIP2Q9NS61 270 aa12.9□□□□□ -0.34
SMARCD1-202ENST00000394963 PRRC2AP48634 2157 aaKnown RBP12.9□□□□□ -0.34
SMARCD1-202ENST00000394963 SLC17A3O00476 420 aa12.9□□□□□ -0.35
SMARCD1-202ENST00000394963 MC5RP33032 325 aa12.9□□□□□ -0.35
SMARCD1-202ENST00000394963 TAS2R45P59539 299 aa12.9□□□□□ -0.35
SMARCD1-202ENST00000394963 TMEM219Q86XT9 240 aa12.9□□□□□ -0.35
SMARCD1-202ENST00000394963 C12orf57Q99622 126 aa12.9□□□□□ -0.35
SMARCD1-202ENST00000394963 DOPEY1Q5JWR5 2465 aa12.9□□□□□ -0.35
SMARCD1-202ENST00000394963 COL8A1P27658 744 aa12.89□□□□□ -0.35
SMARCD1-202ENST00000394963 C10orf113Q5VZT2 155 aa12.89□□□□□ -0.35
SMARCD1-202ENST00000394963 NIT2Q9NQR4 276 aa12.89□□□□□ -0.35
SMARCD1-202ENST00000394963 NAT8Q9UHE5 227 aa12.89□□□□□ -0.35
SMARCD1-202ENST00000394963 ZNF705GA8MUZ8 300 aaPredicted RBP12.89□□□□□ -0.35
SMARCD1-202ENST00000394963 SLC25A5P05141 298 aaKnown RBP12.89□□□□□ -0.35
SMARCD1-202ENST00000394963 CEACAM3P40198 252 aa12.89□□□□□ -0.35
SMARCD1-202ENST00000394963 IGHV3-66A0A0C4DH42 116 aa12.89□□□□□ -0.35
SMARCD1-202ENST00000394963 UBE2G1P62253 170 aa12.89□□□□□ -0.35
SMARCD1-202ENST00000394963 EFNB3Q15768 340 aa12.89□□□□□ -0.35
SMARCD1-202ENST00000394963 TIGITQ495A1 244 aa12.89□□□□□ -0.35
SMARCD1-202ENST00000394963 SEBOXQ9HB31 216 aaPredicted RBP12.89□□□□□ -0.35
SMARCD1-202ENST00000394963 DPM3Q9P2X0 92 aa12.89□□□□□ -0.35
SMARCD1-202ENST00000394963 HIVEP2P31629 2446 aa12.88□□□□□ -0.35
SMARCD1-202ENST00000394963 CHD6Q8TD26 2715 aa12.88□□□□□ -0.35
SMARCD1-202ENST00000394963 DHRS7BQ6IAN0 325 aaPredicted RBP12.88□□□□□ -0.35
SMARCD1-202ENST00000394963 CMTM2Q8TAZ6 248 aa12.88□□□□□ -0.35
SMARCD1-202ENST00000394963 CHODLQ9H9P2 273 aa12.88□□□□□ -0.35
SMARCD1-202ENST00000394963 ANKRD17O75179 2603 aaKnown RBP12.88□□□□□ -0.35
SMARCD1-202ENST00000394963 COL27A1Q8IZC6 1860 aaPredicted RBP12.88□□□□□ -0.35
SMARCD1-202ENST00000394963 DCHS2Q6V1P9 2916 aa12.88□□□□□ -0.35
SMARCD1-202ENST00000394963 C2CD3Q4AC94 2353 aa12.88□□□□□ -0.35
SMARCD1-202ENST00000394963 IGHV1-3A0A0C4DH29 117 aa12.88□□□□□ -0.35
SMARCD1-202ENST00000394963 GNG7O60262 68 aa12.88□□□□□ -0.35
SMARCD1-202ENST00000394963 CXorf1O96002 111 aa12.88□□□□□ -0.35
SMARCD1-202ENST00000394963 SSBP2P81877 361 aaPredicted RBP12.88□□□□□ -0.35
SMARCD1-202ENST00000394963 TEX36Q5VZQ5 186 aa12.88□□□□□ -0.35
SMARCD1-202ENST00000394963 PPP1R27Q86WC6 154 aa12.88□□□□□ -0.35
SMARCD1-202ENST00000394963 MMD2Q8IY49 270 aa12.88□□□□□ -0.35
SMARCD1-202ENST00000394963 Q8WTZ3 238 aa12.88□□□□□ -0.35
SMARCD1-202ENST00000394963 SVEP1Q4LDE5 3571 aa12.88□□□□□ -0.35
SMARCD1-202ENST00000394963 PRCDQ00LT1 54 aa12.87□□□□□ -0.35
SMARCD1-202ENST00000394963 C15orf54Q8N8G6 183 aa12.87□□□□□ -0.35
SMARCD1-202ENST00000394963 OR5B3Q8NH48 314 aa12.87□□□□□ -0.35
SMARCD1-202ENST00000394963 C19orf84I3L1E1 186 aa12.87□□□□□ -0.35
SMARCD1-202ENST00000394963 RBFOX2O43251 390 aaKnown RBP eCLIP12.87□□□□□ -0.35
SMARCD1-202ENST00000394963 TMEM155Q4W5P6 130 aa12.87□□□□□ -0.35
SMARCD1-202ENST00000394963 PQLC2Q6ZP29 291 aa12.87□□□□□ -0.35
SMARCD1-202ENST00000394963 SGMS2Q8NHU3 365 aa12.87□□□□□ -0.35
SMARCD1-202ENST00000394963 SRSF12Q8WXF0 261 aaKnown RBP12.87□□□□□ -0.35
SMARCD1-202ENST00000394963 TECRQ9NZ01 308 aaKnown RBP12.87□□□□□ -0.35
SMARCD1-202ENST00000394963 SLC45A2Q9UMX9 530 aa12.87□□□□□ -0.35
SMARCD1-202ENST00000394963 AMMECR1Q9Y4X0 333 aaPredicted RBP12.87□□□□□ -0.35
SMARCD1-202ENST00000394963 ZNF207O43670 478 aaKnown RBP12.87□□□□□ -0.35
SMARCD1-202ENST00000394963 GCHFRP30047 84 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms