RNA–Protein interactions for RNA: ENST00000394957.7

VSIR-201, Transcript of V-set immunoregulatory receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSIR, Length 4,689 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIR-201ENST00000394957 REG1AP05451 166 aa12.21□□□□□ -0.45
VSIR-201ENST00000394957 COA6Q5JTJ3 125 aaKnown RBP12.21□□□□□ -0.45
VSIR-201ENST00000394957 SPRR3Q9UBC9 169 aa12.21□□□□□ -0.45
VSIR-201ENST00000394957 FAM90A26D6RGX4 464 aa12.21□□□□□ -0.45
VSIR-201ENST00000394957 APCSP02743 223 aa12.21□□□□□ -0.45
VSIR-201ENST00000394957 GAGE5Q13069 117 aa12.21□□□□□ -0.45
VSIR-201ENST00000394957 GAGE6Q13070 117 aa12.21□□□□□ -0.45
VSIR-201ENST00000394957 LRRC75BQ2VPJ9 315 aa12.21□□□□□ -0.45
VSIR-201ENST00000394957 MRPL16Q9NX20 251 aaKnown RBP12.21□□□□□ -0.45
VSIR-201ENST00000394957 JPT1Q9UK76 154 aa12.21□□□□□ -0.45
VSIR-201ENST00000394957 HELZP42694 1942 aaKnown RBP12.21□□□□□ -0.46
VSIR-201ENST00000394957 PPIAL4CA0A0B4J2A2 164 aa12.21□□□□□ -0.46
VSIR-201ENST00000394957 ZNF735P0CB33 412 aa12.21□□□□□ -0.46
VSIR-201ENST00000394957 PPIAL4GP0DN37 164 aa12.21□□□□□ -0.46
VSIR-201ENST00000394957 PQLC2Q6ZP29 291 aa12.21□□□□□ -0.46
VSIR-201ENST00000394957 IGKV3D-15A0A087WSY6 115 aa12.2□□□□□ -0.46
VSIR-201ENST00000394957 H3BTX0 84 aa12.2□□□□□ -0.46
VSIR-201ENST00000394957 KBTBD11O94819 623 aa12.2□□□□□ -0.46
VSIR-201ENST00000394957 PPOXP50336 477 aa12.2□□□□□ -0.46
VSIR-201ENST00000394957 LOXL3P58215 753 aa12.2□□□□□ -0.46
VSIR-201ENST00000394957 SGK494Q96LW2 274 aa12.2□□□□□ -0.46
VSIR-201ENST00000394957 HSPB8Q9UJY1 196 aa12.2□□□□□ -0.46
VSIR-201ENST00000394957 RPL7P18124 248 aaKnown RBP12.2□□□□□ -0.46
VSIR-201ENST00000394957 IGHV1-2P23083 117 aa12.2□□□□□ -0.46
VSIR-201ENST00000394957 NEU4Q8WWR8 484 aaPredicted RBP12.2□□□□□ -0.46
VSIR-201ENST00000394957 IGHV3-35A0A0C4DH35 117 aa12.2□□□□□ -0.46
VSIR-201ENST00000394957 C12orf77C9JDV5 145 aa12.2□□□□□ -0.46
VSIR-201ENST00000394957 TCTAP57738 103 aa12.2□□□□□ -0.46
VSIR-201ENST00000394957 TEX43Q6ZNM6 134 aa12.2□□□□□ -0.46
VSIR-201ENST00000394957 CCL19Q99731 98 aa12.2□□□□□ -0.46
VSIR-201ENST00000394957 EGR1P18146 543 aa12.2□□□□□ -0.46
VSIR-201ENST00000394957 PHF3Q92576 2039 aaKnown RBP12.2□□□□□ -0.46
VSIR-201ENST00000394957 A8MWL6 223 aa12.19□□□□□ -0.46
VSIR-201ENST00000394957 MGPP08493 103 aa12.19□□□□□ -0.46
VSIR-201ENST00000394957 HOXA4Q00056 320 aaPredicted RBP12.19□□□□□ -0.46
VSIR-201ENST00000394957 HGFACQ04756 655 aa12.19□□□□□ -0.46
VSIR-201ENST00000394957 CD300EQ496F6 205 aaPredicted RBP12.19□□□□□ -0.46
VSIR-201ENST00000394957 RPL39P5Q59GN2 51 aa12.19□□□□□ -0.46
VSIR-201ENST00000394957 SLC35E4Q6ICL7 350 aa12.19□□□□□ -0.46
VSIR-201ENST00000394957 IGF2-ASQ6U949 168 aa12.19□□□□□ -0.46
VSIR-201ENST00000394957 MRPL13Q9BYD1 178 aaKnown RBP12.19□□□□□ -0.46
VSIR-201ENST00000394957 A1L4Q6 167 aa12.19□□□□□ -0.46
VSIR-201ENST00000394957 CD5LO43866 347 aa12.19□□□□□ -0.46
VSIR-201ENST00000394957 PAX1P15863 534 aa12.19□□□□□ -0.46
VSIR-201ENST00000394957 PSG7Q13046 419 aa12.19□□□□□ -0.46
VSIR-201ENST00000394957 OR8A1Q8NGG7 326 aa12.19□□□□□ -0.46
VSIR-201ENST00000394957 DCTN5Q9BTE1 182 aa12.19□□□□□ -0.46
VSIR-201ENST00000394957 SDF2L1Q9HCN8 221 aa12.19□□□□□ -0.46
VSIR-201ENST00000394957 RPRMQ9NS64 109 aa12.19□□□□□ -0.46
VSIR-201ENST00000394957 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.19□□□□□ -0.46
VSIR-201ENST00000394957 IGHG3P01860 377 aa12.19□□□□□ -0.46
VSIR-201ENST00000394957 MORN2Q502X0 79 aa12.19□□□□□ -0.46
VSIR-201ENST00000394957 IBA57Q5T440 356 aaKnown RBP12.19□□□□□ -0.46
VSIR-201ENST00000394957 SPANXN1Q5VSR9 72 aa12.19□□□□□ -0.46
VSIR-201ENST00000394957 OR9G1Q8NH87 305 aa12.19□□□□□ -0.46
VSIR-201ENST00000394957 LYPD3O95274 346 aa12.19□□□□□ -0.46
VSIR-201ENST00000394957 MT-ND6P03923 174 aa12.19□□□□□ -0.46
VSIR-201ENST00000394957 SRSF6Q13247 344 aaKnown RBP12.19□□□□□ -0.46
VSIR-201ENST00000394957 IGFL3Q6UXB1 125 aa12.19□□□□□ -0.46
VSIR-201ENST00000394957 LSM10Q969L4 123 aaKnown RBP12.19□□□□□ -0.46
VSIR-201ENST00000394957 RNF126Q9BV68 326 aa12.19□□□□□ -0.46
VSIR-201ENST00000394957 REPIN1Q9BWE0 567 aaKnown RBP12.19□□□□□ -0.46
VSIR-201ENST00000394957 CUL9Q8IWT3 2517 aa12.18□□□□□ -0.46
VSIR-201ENST00000394957 CGB1A6NKQ9 187 aa12.18□□□□□ -0.46
VSIR-201ENST00000394957 SMIM20Q8N5G0 67 aa12.18□□□□□ -0.46
VSIR-201ENST00000394957 OR10AG1Q8NH19 301 aa12.18□□□□□ -0.46
VSIR-201ENST00000394957 MAP1LC3CQ9BXW4 147 aa12.18□□□□□ -0.46
VSIR-201ENST00000394957 C2orf16Q68DN1 1984 aa12.18□□□□□ -0.46
VSIR-201ENST00000394957 CA1P00915 261 aaPredicted RBP12.18□□□□□ -0.46
VSIR-201ENST00000394957 CLPSP04118 112 aa12.18□□□□□ -0.46
VSIR-201ENST00000394957 SEC11AP67812 179 aa12.18□□□□□ -0.46
VSIR-201ENST00000394957 NPIPB3Q92617 1050 aa12.18□□□□□ -0.46
VSIR-201ENST00000394957 QTRT1Q9BXR0 403 aaKnown RBP12.18□□□□□ -0.46
VSIR-201ENST00000394957 TRAV9-2A0A087WT02 112 aa12.18□□□□□ -0.46
VSIR-201ENST00000394957 FAM106CPP0CH98 169 aa12.18□□□□□ -0.46
VSIR-201ENST00000394957 ARL14EPLP0DKL9 152 aa12.18□□□□□ -0.46
VSIR-201ENST00000394957 FCGR2BP31994 310 aaPredicted RBP12.18□□□□□ -0.46
VSIR-201ENST00000394957 GFRA1P56159 465 aa12.18□□□□□ -0.46
VSIR-201ENST00000394957 RBPMS2Q6ZRY4 209 aaKnown RBP12.18□□□□□ -0.46
VSIR-201ENST00000394957 OR4C13Q8NGP0 309 aa12.18□□□□□ -0.46
VSIR-201ENST00000394957 TM2D1Q9BX74 207 aa12.18□□□□□ -0.46
VSIR-201ENST00000394957 C7orf71A4D174 169 aa12.17□□□□□ -0.46
VSIR-201ENST00000394957 CELA3BP08861 270 aa12.17□□□□□ -0.46
VSIR-201ENST00000394957 FNDC4Q9H6D8 234 aaPredicted RBP12.17□□□□□ -0.46
VSIR-201ENST00000394957 LOC389332A0A1B0GUA5 103 aa12.17□□□□□ -0.46
VSIR-201ENST00000394957 CRYBB3P26998 211 aa12.17□□□□□ -0.46
VSIR-201ENST00000394957 ODF1Q14990 250 aa12.17□□□□□ -0.46
VSIR-201ENST00000394957 ST20Q9HBF5 79 aa12.17□□□□□ -0.46
VSIR-201ENST00000394957 FXYD3Q14802 87 aa12.17□□□□□ -0.46
VSIR-201ENST00000394957 TMEM97Q5BJF2 176 aa12.17□□□□□ -0.46
VSIR-201ENST00000394957 C5orf24Q7Z6I8 188 aa12.17□□□□□ -0.46
VSIR-201ENST00000394957 ZNF319Q9P2F9 582 aa12.17□□□□□ -0.46
VSIR-201ENST00000394957 C8orf88P0DMB2 117 aa12.17□□□□□ -0.46
VSIR-201ENST00000394957 BSPH1Q075Z2 132 aa12.17□□□□□ -0.46
VSIR-201ENST00000394957 TXNDC17Q9BRA2 123 aa12.17□□□□□ -0.46
VSIR-201ENST00000394957 LOC105371242A0A075B767 164 aa12.16□□□□□ -0.46
VSIR-201ENST00000394957 IGLC2P0DOY2 106 aa12.16□□□□□ -0.46
VSIR-201ENST00000394957 IGLC3P0DOY3 106 aa12.16□□□□□ -0.46
VSIR-201ENST00000394957 C5orf64Q2M2E5 130 aa12.16□□□□□ -0.46
VSIR-201ENST00000394957 SCGB1D4Q6XE38 83 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms