RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 PINX1Q96BK5 328 aaKnown RBP15.37■□□□□ 0.05
TRAF4-203ENST00000394925 GINS3Q9BRX5 216 aa15.37■□□□□ 0.05
TRAF4-203ENST00000394925 VCX3BQ9H321 246 aa15.37■□□□□ 0.05
TRAF4-203ENST00000394925 FAT2Q9NYQ8 4349 aa15.36■□□□□ 0.05
TRAF4-203ENST00000394925 IGHV3-66A0A0C4DH42 116 aa15.36■□□□□ 0.05
TRAF4-203ENST00000394925 DFFBO76075 338 aa15.36■□□□□ 0.05
TRAF4-203ENST00000394925 PMP2P02689 132 aa15.36■□□□□ 0.05
TRAF4-203ENST00000394925 CD5P06127 495 aa15.36■□□□□ 0.05
TRAF4-203ENST00000394925 RPL11P62913 178 aaKnown RBP15.36■□□□□ 0.05
TRAF4-203ENST00000394925 TOMM20LQ6UXN7 152 aa15.36■□□□□ 0.05
TRAF4-203ENST00000394925 STHQ8IWL8 128 aa15.36■□□□□ 0.05
TRAF4-203ENST00000394925 FAM24BQ8N5W8 94 aa15.36■□□□□ 0.05
TRAF4-203ENST00000394925 TSC22D3Q99576 134 aa15.36■□□□□ 0.05
TRAF4-203ENST00000394925 HRH4Q9H3N8 390 aa15.36■□□□□ 0.05
TRAF4-203ENST00000394925 IGHV4-28A0A0C4DH34 117 aa15.35■□□□□ 0.05
TRAF4-203ENST00000394925 RBMY1A1P0DJD3 496 aaKnown RBP15.35■□□□□ 0.05
TRAF4-203ENST00000394925 RBMY1CP0DJD4 496 aa15.35■□□□□ 0.05
TRAF4-203ENST00000394925 RBMY1FQ15415 496 aaKnown RBP15.35■□□□□ 0.05
TRAF4-203ENST00000394925 VSIRQ9H7M9 311 aa15.35■□□□□ 0.05
TRAF4-203ENST00000394925 DNAH2Q9P225 4427 aa15.35■□□□□ 0.05
TRAF4-203ENST00000394925 DNAH17Q9UFH2 4485 aa15.35■□□□□ 0.05
TRAF4-203ENST00000394925 LOC100506127A0A0U1RQW1 187 aa15.34■□□□□ 0.05
TRAF4-203ENST00000394925 GPR31O00270 319 aa15.34■□□□□ 0.05
TRAF4-203ENST00000394925 HLA-DMBP28068 263 aa15.34■□□□□ 0.05
TRAF4-203ENST00000394925 LINC00336Q6ZUF6 198 aa15.34■□□□□ 0.05
TRAF4-203ENST00000394925 DUSP18Q8NEJ0 188 aa15.34■□□□□ 0.05
TRAF4-203ENST00000394925 FCGR1BQ92637 280 aa15.34■□□□□ 0.05
TRAF4-203ENST00000394925 FXYD6Q9H0Q3 95 aa15.34■□□□□ 0.05
TRAF4-203ENST00000394925 RABAC1Q9UI14 185 aa15.34■□□□□ 0.05
TRAF4-203ENST00000394925 PHLDA2Q53GA4 152 aa15.33■□□□□ 0.04
TRAF4-203ENST00000394925 Q6ZTC4 211 aa15.33■□□□□ 0.04
TRAF4-203ENST00000394925 ZNF114Q8NC26 417 aa15.33■□□□□ 0.04
TRAF4-203ENST00000394925 OR5H2Q8NGV7 314 aa15.33■□□□□ 0.04
TRAF4-203ENST00000394925 OR4A16Q8NH70 328 aa15.33■□□□□ 0.04
TRAF4-203ENST00000394925 IGHV4-4A0A075B6R2 117 aa15.32■□□□□ 0.04
TRAF4-203ENST00000394925 TRAV2A0A0B4J234 112 aa15.32■□□□□ 0.04
TRAF4-203ENST00000394925 TRAV10A0A0B4J240 114 aa15.32■□□□□ 0.04
TRAF4-203ENST00000394925 GIG44P09565 113 aaPredicted RBP15.32■□□□□ 0.04
TRAF4-203ENST00000394925 PRCDQ00LT1 54 aa15.32■□□□□ 0.04
TRAF4-203ENST00000394925 RAB26Q9ULW5 256 aa15.32■□□□□ 0.04
TRAF4-203ENST00000394925 PUS1Q9Y606 427 aaKnown RBP eCLIP15.32■□□□□ 0.04
TRAF4-203ENST00000394925 ZNF600Q6ZNG1 722 aa15.31■□□□□ 0.04
TRAF4-203ENST00000394925 H2BFWTQ7Z2G1 175 aa15.31■□□□□ 0.04
TRAF4-203ENST00000394925 CENPSQ8N2Z9 138 aa15.31■□□□□ 0.04
TRAF4-203ENST00000394925 OR6F1Q8NGZ6 308 aa15.31■□□□□ 0.04
TRAF4-203ENST00000394925 SEC22AQ96IW7 307 aa15.31■□□□□ 0.04
TRAF4-203ENST00000394925 ZFAND3Q9H8U3 227 aa15.31■□□□□ 0.04
TRAF4-203ENST00000394925 ANAPC10Q9UM13 185 aa15.31■□□□□ 0.04
TRAF4-203ENST00000394925 MIFP14174 115 aa15.3■□□□□ 0.04
TRAF4-203ENST00000394925 NPBWR1P48145 328 aa15.3■□□□□ 0.04
TRAF4-203ENST00000394925 TAS2R46P59540 309 aa15.3■□□□□ 0.04
TRAF4-203ENST00000394925 ERHP84090 104 aaKnown RBP15.3■□□□□ 0.04
TRAF4-203ENST00000394925 TRPT1Q86TN4 253 aaKnown RBP15.3■□□□□ 0.04
TRAF4-203ENST00000394925 S100A16Q96FQ6 103 aaKnown RBP15.3■□□□□ 0.04
TRAF4-203ENST00000394925 MUC4Q99102 2169 aa15.29■□□□□ 0.04
TRAF4-203ENST00000394925 ELOA3CA0A087WX78 387 aaPredicted RBP15.29■□□□□ 0.04
TRAF4-203ENST00000394925 A0A1B0GVY2 172 aa15.29■□□□□ 0.04
TRAF4-203ENST00000394925 IGKV1-39P01597 117 aa15.29■□□□□ 0.04
TRAF4-203ENST00000394925 IGKV1D-39P04432 117 aa15.29■□□□□ 0.04
TRAF4-203ENST00000394925 HSPE1P61604 102 aaKnown RBP15.29■□□□□ 0.04
TRAF4-203ENST00000394925 TMEM41BQ5BJD5 291 aa15.29■□□□□ 0.04
TRAF4-203ENST00000394925 SPINK9Q5DT21 86 aa15.29■□□□□ 0.04
TRAF4-203ENST00000394925 TBC1D26Q86UD7 250 aa15.29■□□□□ 0.04
TRAF4-203ENST00000394925 STXBP6Q8NFX7 210 aa15.29■□□□□ 0.04
TRAF4-203ENST00000394925 TMEM231Q9H6L2 316 aa15.29■□□□□ 0.04
TRAF4-203ENST00000394925 A0A1B0GU03 582 aa15.28■□□□□ 0.04
TRAF4-203ENST00000394925 KNCNA6PVL3 124 aa15.28■□□□□ 0.04
TRAF4-203ENST00000394925 ZNF705EA8MWA4 302 aaPredicted RBP15.28■□□□□ 0.04
TRAF4-203ENST00000394925 SPP1P10451 314 aa15.28■□□□□ 0.04
TRAF4-203ENST00000394925 NAT1P18440 290 aa15.28■□□□□ 0.04
TRAF4-203ENST00000394925 C4BPBP20851 252 aa15.28■□□□□ 0.04
TRAF4-203ENST00000394925 S100GP29377 79 aa15.28■□□□□ 0.04
TRAF4-203ENST00000394925 PVRIGQ6DKI7 326 aa15.28■□□□□ 0.04
TRAF4-203ENST00000394925 MORN3Q6PF18 240 aaPredicted RBP15.28■□□□□ 0.04
TRAF4-203ENST00000394925 MRGPRFQ96AM1 343 aa15.28■□□□□ 0.04
TRAF4-203ENST00000394925 FAM212BQ9NTI7 297 aaPredicted RBP15.28■□□□□ 0.04
TRAF4-203ENST00000394925 X6R8D5 127 aa15.28■□□□□ 0.04
TRAF4-203ENST00000394925 K7EQG2 157 aa15.27■□□□□ 0.04
TRAF4-203ENST00000394925 TMEM50AO95807 157 aa15.27■□□□□ 0.04
TRAF4-203ENST00000394925 ZNF688P0C7X2 276 aa15.27■□□□□ 0.04
TRAF4-203ENST00000394925 NPPCP23582 126 aa15.27■□□□□ 0.04
TRAF4-203ENST00000394925 HLA-DMAP28067 261 aa15.27■□□□□ 0.04
TRAF4-203ENST00000394925 HRH1P35367 487 aa15.27■□□□□ 0.04
TRAF4-203ENST00000394925 TAS2R20P59543 309 aa15.27■□□□□ 0.04
TRAF4-203ENST00000394925 TMEM69Q5SWH9 247 aa15.27■□□□□ 0.04
TRAF4-203ENST00000394925 RNF126Q9BV68 326 aa15.27■□□□□ 0.04
TRAF4-203ENST00000394925 CLEC5AQ9NY25 188 aa15.27■□□□□ 0.04
TRAF4-203ENST00000394925 MED14OSP0DP75 135 aa15.26■□□□□ 0.03
TRAF4-203ENST00000394925 SNCAP37840 140 aa15.26■□□□□ 0.03
TRAF4-203ENST00000394925 IZUMO4Q1ZYL8 232 aa15.26■□□□□ 0.03
TRAF4-203ENST00000394925 LPCAT3Q6P1A2 487 aa15.26■□□□□ 0.03
TRAF4-203ENST00000394925 LYSMD2Q8IV50 215 aa15.26■□□□□ 0.03
TRAF4-203ENST00000394925 A0A1W2PS18 150 aa15.25■□□□□ 0.03
TRAF4-203ENST00000394925 PRSS3P35030 304 aa15.25■□□□□ 0.03
TRAF4-203ENST00000394925 TSPAN5P62079 268 aa15.25■□□□□ 0.03
TRAF4-203ENST00000394925 ACTL10Q5JWF8 245 aa15.25■□□□□ 0.03
TRAF4-203ENST00000394925 UBE2NLQ5JXB2 153 aa15.25■□□□□ 0.03
TRAF4-203ENST00000394925 ZNF767PQ75MW2 155 aa15.25■□□□□ 0.03
TRAF4-203ENST00000394925 GRAMD2BQ96HH9 432 aa15.25■□□□□ 0.03
TRAF4-203ENST00000394925 TBC1D24Q9ULP9 559 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms