RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 SNRNP40Q96DI7 357 aaKnown RBP10.95□□□□□ -0.66
NFKB1-202ENST00000394820 LPAR2Q9HBW0 351 aa10.95□□□□□ -0.66
NFKB1-202ENST00000394820 ZNF891A8MT65 544 aaPredicted RBP10.95□□□□□ -0.66
NFKB1-202ENST00000394820 M0QZK8 103 aa10.95□□□□□ -0.66
NFKB1-202ENST00000394820 GGCTO75223 188 aaKnown RBP10.95□□□□□ -0.66
NFKB1-202ENST00000394820 FXYD7P58549 80 aa10.95□□□□□ -0.66
NFKB1-202ENST00000394820 LYZP61626 148 aa10.95□□□□□ -0.66
NFKB1-202ENST00000394820 HES1Q14469 280 aa10.95□□□□□ -0.66
NFKB1-202ENST00000394820 Q6P435 159 aa10.95□□□□□ -0.66
NFKB1-202ENST00000394820 MGST2Q99735 147 aa10.95□□□□□ -0.66
NFKB1-202ENST00000394820 GGTLC1Q9BX51 225 aa10.95□□□□□ -0.66
NFKB1-202ENST00000394820 TP73-AS1Q9UF72 201 aa10.95□□□□□ -0.66
NFKB1-202ENST00000394820 FBXL7Q9UJT9 491 aa10.95□□□□□ -0.66
NFKB1-202ENST00000394820 PGPA6NDG6 321 aa10.94□□□□□ -0.66
NFKB1-202ENST00000394820 VENTXO95231 258 aa10.94□□□□□ -0.66
NFKB1-202ENST00000394820 ZNF883P0CG24 379 aa10.94□□□□□ -0.66
NFKB1-202ENST00000394820 HTR1DP28221 377 aa10.94□□□□□ -0.66
NFKB1-202ENST00000394820 SAXO1Q8IYX7 474 aa10.94□□□□□ -0.66
NFKB1-202ENST00000394820 EAF1Q96JC9 268 aaPredicted RBP10.94□□□□□ -0.66
NFKB1-202ENST00000394820 PKIBQ9C010 78 aa10.94□□□□□ -0.66
NFKB1-202ENST00000394820 DYNLRB1Q9NP97 96 aa10.94□□□□□ -0.66
NFKB1-202ENST00000394820 PROCRQ9UNN8 238 aa10.94□□□□□ -0.66
NFKB1-202ENST00000394820 MRPS18CQ9Y3D5 142 aaKnown RBP10.94□□□□□ -0.66
NFKB1-202ENST00000394820 A0A1W2PN81 502 aa10.94□□□□□ -0.66
NFKB1-202ENST00000394820 WT1P19544 449 aaPredicted RBP10.94□□□□□ -0.66
NFKB1-202ENST00000394820 LCN2P80188 198 aa10.94□□□□□ -0.66
NFKB1-202ENST00000394820 FAM216BQ8N7L0 139 aa10.94□□□□□ -0.66
NFKB1-202ENST00000394820 ZC2HC1AQ96GY0 325 aa10.94□□□□□ -0.66
NFKB1-202ENST00000394820 SPRY4Q9C004 299 aa10.94□□□□□ -0.66
NFKB1-202ENST00000394820 UQCR10Q9UDW1 63 aa10.94□□□□□ -0.66
NFKB1-202ENST00000394820 LAMTOR2Q9Y2Q5 125 aa10.94□□□□□ -0.66
NFKB1-202ENST00000394820 KIAA1549Q9HCM3 1950 aa10.94□□□□□ -0.66
NFKB1-202ENST00000394820 TRBV20OR9-2A0A075B6H5 130 aa10.94□□□□□ -0.66
NFKB1-202ENST00000394820 NUDT3O95989 172 aa10.94□□□□□ -0.66
NFKB1-202ENST00000394820 COX7A1P24310 79 aa10.94□□□□□ -0.66
NFKB1-202ENST00000394820 DLX1P56177 255 aa10.94□□□□□ -0.66
NFKB1-202ENST00000394820 ZNF295-AS1Q8N0V1 137 aa10.94□□□□□ -0.66
NFKB1-202ENST00000394820 TMEM116Q8NCL8 245 aa10.94□□□□□ -0.66
NFKB1-202ENST00000394820 MDS2Q8NDY4 140 aa10.94□□□□□ -0.66
NFKB1-202ENST00000394820 COQ2Q96H96 371 aa10.94□□□□□ -0.66
NFKB1-202ENST00000394820 WDR83OSQ9Y284 106 aa10.94□□□□□ -0.66
NFKB1-202ENST00000394820 AMMECR1Q9Y4X0 333 aaPredicted RBP10.94□□□□□ -0.66
NFKB1-202ENST00000394820 KALRNO60229 2985 aa10.93□□□□□ -0.66
NFKB1-202ENST00000394820 FAM90A26D6RGX4 464 aa10.93□□□□□ -0.66
NFKB1-202ENST00000394820 OR4A47Q6IF82 309 aa10.93□□□□□ -0.66
NFKB1-202ENST00000394820 FAM214BQ7L5A3 538 aa10.93□□□□□ -0.66
NFKB1-202ENST00000394820 C9orf106Q8NAJ2 232 aa10.93□□□□□ -0.66
NFKB1-202ENST00000394820 OR8B3Q8NGG8 313 aa10.93□□□□□ -0.66
NFKB1-202ENST00000394820 RCHY1Q96PM5 261 aa10.93□□□□□ -0.66
NFKB1-202ENST00000394820 PARD6GQ9BYG4 376 aaPredicted RBP10.93□□□□□ -0.66
NFKB1-202ENST00000394820 CALYQ9NYX4 217 aa10.93□□□□□ -0.66
NFKB1-202ENST00000394820 DAZAP2Q15038 168 aaPredicted RBP10.93□□□□□ -0.66
NFKB1-202ENST00000394820 ACP7Q6ZNF0 438 aa10.93□□□□□ -0.66
NFKB1-202ENST00000394820 CORO2AQ92828 525 aa10.93□□□□□ -0.66
NFKB1-202ENST00000394820 COL12A1Q99715 3063 aa10.93□□□□□ -0.66
NFKB1-202ENST00000394820 CECR9P0C854 216 aa10.93□□□□□ -0.66
NFKB1-202ENST00000394820 PRSS3P2Q8NHM4 247 aa10.93□□□□□ -0.66
NFKB1-202ENST00000394820 KCNS1Q96KK3 526 aa10.93□□□□□ -0.66
NFKB1-202ENST00000394820 SAP30LQ9HAJ7 183 aa10.93□□□□□ -0.66
NFKB1-202ENST00000394820 hADV38S2A0JD32 116 aa10.92□□□□□ -0.66
NFKB1-202ENST00000394820 OR5AL1P0C617 328 aa10.92□□□□□ -0.66
NFKB1-202ENST00000394820 COL8A1P27658 744 aa10.92□□□□□ -0.66
NFKB1-202ENST00000394820 TNFAIP6P98066 277 aaPredicted RBP10.92□□□□□ -0.66
NFKB1-202ENST00000394820 NHLH1Q02575 133 aa10.92□□□□□ -0.66
NFKB1-202ENST00000394820 DUX4L9Q6RFH8 374 aaPredicted RBP10.92□□□□□ -0.66
NFKB1-202ENST00000394820 PAXXQ9BUH6 204 aa10.92□□□□□ -0.66
NFKB1-202ENST00000394820 DSCAML1Q8TD84 2053 aa10.92□□□□□ -0.66
NFKB1-202ENST00000394820 TACC2O95359 2948 aa10.92□□□□□ -0.66
NFKB1-202ENST00000394820 CD99P14209 185 aa10.92□□□□□ -0.66
NFKB1-202ENST00000394820 TNFSF4P23510 183 aa10.92□□□□□ -0.66
NFKB1-202ENST00000394820 HSPE1P61604 102 aaKnown RBP10.92□□□□□ -0.66
NFKB1-202ENST00000394820 TNXAQ16473 311 aa10.92□□□□□ -0.66
NFKB1-202ENST00000394820 PRNTQ86SH4 94 aa10.92□□□□□ -0.66
NFKB1-202ENST00000394820 OR4B1Q8NGF8 309 aa10.92□□□□□ -0.66
NFKB1-202ENST00000394820 GMPPAQ96IJ6 420 aaPredicted RBP10.92□□□□□ -0.66
NFKB1-202ENST00000394820 SLC25A17O43808 307 aa10.91□□□□□ -0.66
NFKB1-202ENST00000394820 C3orf79P0CE67 100 aa10.91□□□□□ -0.66
NFKB1-202ENST00000394820 WDR73Q6P4I2 378 aa10.91□□□□□ -0.66
NFKB1-202ENST00000394820 ZNF738Q8NE65 137 aa10.91□□□□□ -0.66
NFKB1-202ENST00000394820 GSX1Q9H4S2 264 aaPredicted RBP10.91□□□□□ -0.66
NFKB1-202ENST00000394820 TMEM167BQ9NRX6 74 aa10.91□□□□□ -0.66
NFKB1-202ENST00000394820 SETD2Q9BYW2 2564 aaPredicted RBP10.91□□□□□ -0.66
NFKB1-202ENST00000394820 MAS1LP35410 378 aa10.91□□□□□ -0.66
NFKB1-202ENST00000394820 WDR82Q6UXN9 313 aa10.91□□□□□ -0.66
NFKB1-202ENST00000394820 Q6ZSR3 168 aa10.91□□□□□ -0.66
NFKB1-202ENST00000394820 PCSK5Q92824 1860 aa10.91□□□□□ -0.66
NFKB1-202ENST00000394820 DUTP33316 252 aaKnown RBP10.91□□□□□ -0.66
NFKB1-202ENST00000394820 C10orf113Q5VZT2 155 aa10.91□□□□□ -0.66
NFKB1-202ENST00000394820 LINC00596Q86U02 117 aa10.91□□□□□ -0.66
NFKB1-202ENST00000394820 PDPNQ86YL7 162 aa10.91□□□□□ -0.66
NFKB1-202ENST00000394820 PTPN13Q12923 2485 aa10.91□□□□□ -0.66
NFKB1-202ENST00000394820 hDV102S1A0JD36 115 aa10.9□□□□□ -0.66
NFKB1-202ENST00000394820 MLNRO43193 412 aa10.9□□□□□ -0.66
NFKB1-202ENST00000394820 ADH4P08319 380 aa10.9□□□□□ -0.66
NFKB1-202ENST00000394820 COMPP49747 757 aaPredicted RBP10.9□□□□□ -0.66
NFKB1-202ENST00000394820 KLF3P57682 345 aaPredicted RBP10.9□□□□□ -0.66
NFKB1-202ENST00000394820 KRTAP27-1Q3LI81 207 aa10.9□□□□□ -0.66
NFKB1-202ENST00000394820 Q6ZR03 302 aa10.9□□□□□ -0.66
NFKB1-202ENST00000394820 ZBTB34Q8NCN2 500 aa10.9□□□□□ -0.66
NFKB1-202ENST00000394820 TIMM9Q9Y5J7 89 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms