RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 MLANAQ16655 118 aa11.93□□□□□ -0.5
CCT4-201ENST00000394440 GCSAMLQ5JQS6 135 aa11.93□□□□□ -0.5
CCT4-201ENST00000394440 FNDC4Q9H6D8 234 aaPredicted RBP11.93□□□□□ -0.5
CCT4-201ENST00000394440 LOC102723971A0A1B0GUV8 181 aa11.93□□□□□ -0.5
CCT4-201ENST00000394440 EIF3GO75821 320 aaKnown RBP eCLIP11.93□□□□□ -0.5
CCT4-201ENST00000394440 DEFA4P12838 97 aa11.93□□□□□ -0.5
CCT4-201ENST00000394440 CD24P25063 80 aa11.93□□□□□ -0.5
CCT4-201ENST00000394440 RPL29P47914 159 aaKnown RBP11.93□□□□□ -0.5
CCT4-201ENST00000394440 SUB1P53999 127 aaKnown RBP eCLIP11.93□□□□□ -0.52e-8■■■■■ 37.4
CCT4-201ENST00000394440 PRR20EP86478 221 aa11.93□□□□□ -0.5
CCT4-201ENST00000394440 PRR20CP86479 221 aa11.93□□□□□ -0.5
CCT4-201ENST00000394440 PRR20DP86480 221 aa11.93□□□□□ -0.5
CCT4-201ENST00000394440 PRR20BP86481 221 aa11.93□□□□□ -0.5
CCT4-201ENST00000394440 PRR20AP86496 221 aa11.93□□□□□ -0.5
CCT4-201ENST00000394440 HAGHQ16775 308 aa11.93□□□□□ -0.5
CCT4-201ENST00000394440 FAM122CQ6P4D5 195 aa11.93□□□□□ -0.5
CCT4-201ENST00000394440 SLC16A13Q7RTY0 426 aa11.93□□□□□ -0.5
CCT4-201ENST00000394440 MRPL41Q8IXM3 137 aaKnown RBP11.93□□□□□ -0.5
CCT4-201ENST00000394440 OR2T10Q8NGZ9 312 aa11.93□□□□□ -0.5
CCT4-201ENST00000394440 SRSF12Q8WXF0 261 aaKnown RBP11.93□□□□□ -0.5
CCT4-201ENST00000394440 RAB24Q969Q5 203 aa11.93□□□□□ -0.5
CCT4-201ENST00000394440 MALSU1Q96EH3 234 aa11.93□□□□□ -0.5
CCT4-201ENST00000394440 ACTR3CQ9C0K3 210 aaPredicted RBP11.93□□□□□ -0.5
CCT4-201ENST00000394440 SLC35B3Q9H1N7 401 aa11.93□□□□□ -0.5
CCT4-201ENST00000394440 AREGP15514 252 aa11.92□□□□□ -0.5
CCT4-201ENST00000394440 KHDC3LQ587J8 217 aa11.92□□□□□ -0.5
CCT4-201ENST00000394440 HIST2H2BCQ6DN03 193 aa11.92□□□□□ -0.5
CCT4-201ENST00000394440 VPS13CQ709C8 3753 aa11.92□□□□□ -0.5
CCT4-201ENST00000394440 NBPF19A0A087WUL8 3843 aa11.92□□□□□ -0.5
CCT4-201ENST00000394440 CYB5BO43169 146 aa11.92□□□□□ -0.5
CCT4-201ENST00000394440 REG1AP05451 166 aa11.92□□□□□ -0.5
CCT4-201ENST00000394440 CDC34P49427 236 aaPredicted RBP11.92□□□□□ -0.5
CCT4-201ENST00000394440 MFAP2P55001 183 aa11.92□□□□□ -0.5
CCT4-201ENST00000394440 DSCR9P59020 149 aa11.92□□□□□ -0.5
CCT4-201ENST00000394440 SSMEM1Q8WWF3 244 aa11.92□□□□□ -0.5
CCT4-201ENST00000394440 HSPB1P04792 205 aaKnown RBP11.91□□□□□ -0.5
CCT4-201ENST00000394440 SRP19P09132 144 aaKnown RBP11.91□□□□□ -0.5
CCT4-201ENST00000394440 BCL2P10415 239 aa11.91□□□□□ -0.5
CCT4-201ENST00000394440 SAA4P35542 130 aa11.91□□□□□ -0.5
CCT4-201ENST00000394440 B2MP61769 119 aa11.91□□□□□ -0.5
CCT4-201ENST00000394440 GNB1P62873 340 aa11.91□□□□□ -0.5
CCT4-201ENST00000394440 STPG3Q8N7X2 389 aa11.91□□□□□ -0.5
CCT4-201ENST00000394440 SRSF8Q9BRL6 282 aaKnown RBP11.91□□□□□ -0.5
CCT4-201ENST00000394440 NKX6-2Q9C056 277 aaPredicted RBP11.91□□□□□ -0.5
CCT4-201ENST00000394440 GNG13Q9P2W3 67 aa11.91□□□□□ -0.5
CCT4-201ENST00000394440 SLC45A2Q9UMX9 530 aa11.91□□□□□ -0.5
CCT4-201ENST00000394440 CENPVL3A0A0U1RRI6 287 aa11.91□□□□□ -0.5
CCT4-201ENST00000394440 LINC00869P0C866 280 aa11.91□□□□□ -0.5
CCT4-201ENST00000394440 RAB31Q13636 194 aa11.91□□□□□ -0.5
CCT4-201ENST00000394440 PLGLAQ15195 96 aa11.91□□□□□ -0.5
CCT4-201ENST00000394440 C5orf64Q2M2E5 130 aa11.91□□□□□ -0.5
CCT4-201ENST00000394440 TMEM249Q2WGJ8 235 aa11.91□□□□□ -0.5
CCT4-201ENST00000394440 PIP4P2Q8N4L2 257 aa11.91□□□□□ -0.5
CCT4-201ENST00000394440 CRYGCP07315 174 aa11.9□□□□□ -0.5
CCT4-201ENST00000394440 HES1Q14469 280 aa11.9□□□□□ -0.5
CCT4-201ENST00000394440 OR1P1Q8NH06 330 aa11.9□□□□□ -0.5
CCT4-201ENST00000394440 NPFFO15130 113 aa11.9□□□□□ -0.5
CCT4-201ENST00000394440 HMGB3O15347 200 aaKnown RBP11.9□□□□□ -0.5
CCT4-201ENST00000394440 OR2T6Q8NHC8 308 aa11.9□□□□□ -0.5
CCT4-201ENST00000394440 SUN5Q8TC36 379 aa11.9□□□□□ -0.5
CCT4-201ENST00000394440 RXFP4Q8TDU9 374 aa11.9□□□□□ -0.5
CCT4-201ENST00000394440 SLC35E1Q96K37 410 aa11.9□□□□□ -0.5
CCT4-201ENST00000394440 F11RQ9Y624 299 aaKnown RBP11.9□□□□□ -0.5
CCT4-201ENST00000394440 ANKRD17O75179 2603 aaKnown RBP11.89□□□□□ -0.51
CCT4-201ENST00000394440 ZFP92A6NM28 416 aa11.89□□□□□ -0.51
CCT4-201ENST00000394440 C19orf35Q6ZS72 473 aa11.89□□□□□ -0.51
CCT4-201ENST00000394440 SNAPINO95295 136 aa11.89□□□□□ -0.51
CCT4-201ENST00000394440 NPBWR1P48145 328 aa11.89□□□□□ -0.51
CCT4-201ENST00000394440 BTN1A1Q13410 526 aa11.89□□□□□ -0.51
CCT4-201ENST00000394440 TMPRSS5Q9H3S3 457 aa11.89□□□□□ -0.51
CCT4-201ENST00000394440 MRPL36Q9P0J6 103 aaKnown RBP11.89□□□□□ -0.51
CCT4-201ENST00000394440 DMRT1Q9Y5R6 373 aa11.89□□□□□ -0.51
CCT4-201ENST00000394440 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.88□□□□□ -0.519e-7■■■■□ 25.1
CCT4-201ENST00000394440 A0A096LNT2 108 aa11.88□□□□□ -0.51
CCT4-201ENST00000394440 APELAP0DMC3 54 aa11.88□□□□□ -0.51
CCT4-201ENST00000394440 SLC25A16P16260 332 aa11.88□□□□□ -0.51
CCT4-201ENST00000394440 COL8A1P27658 744 aa11.88□□□□□ -0.51
CCT4-201ENST00000394440 OR10J1P30954 320 aa11.88□□□□□ -0.51
CCT4-201ENST00000394440 THAP8Q8NA92 274 aa11.88□□□□□ -0.51
CCT4-201ENST00000394440 STAG3L2P0CL84 134 aa11.88□□□□□ -0.51
CCT4-201ENST00000394440 STAG3L3P0CL85 134 aa11.88□□□□□ -0.51
CCT4-201ENST00000394440 CLEC12BQ2HXU8 276 aa11.88□□□□□ -0.51
CCT4-201ENST00000394440 TMA7Q9Y2S6 64 aaKnown RBP11.88□□□□□ -0.51
CCT4-201ENST00000394440 CELSR2Q9HCU4 2923 aa11.87□□□□□ -0.51
CCT4-201ENST00000394440 IGKV1D-37A0A075B6S9 117 aa11.87□□□□□ -0.51
CCT4-201ENST00000394440 DNASE2O00115 360 aaPredicted RBP11.87□□□□□ -0.51
CCT4-201ENST00000394440 CORTO00230 105 aa11.87□□□□□ -0.51
CCT4-201ENST00000394440 IFNA1P01562 189 aa11.87□□□□□ -0.51
CCT4-201ENST00000394440 MSMBP08118 114 aa11.87□□□□□ -0.51
CCT4-201ENST00000394440 FBP1P09467 338 aa11.87□□□□□ -0.51
CCT4-201ENST00000394440 TMEM11P17152 192 aa11.87□□□□□ -0.51
CCT4-201ENST00000394440 KRTAP10-9P60411 292 aa11.87□□□□□ -0.51
CCT4-201ENST00000394440 LINC00469Q8N7U9 141 aa11.87□□□□□ -0.51
CCT4-201ENST00000394440 CYB561D1Q8N8Q1 229 aa11.87□□□□□ -0.51
CCT4-201ENST00000394440 CLRN3Q8NCR9 226 aa11.87□□□□□ -0.51
CCT4-201ENST00000394440 ACY3Q96HD9 319 aa11.87□□□□□ -0.51
CCT4-201ENST00000394440 VAX2Q9UIW0 290 aa11.87□□□□□ -0.51
CCT4-201ENST00000394440 A0A1W2PPV4 95 aa11.87□□□□□ -0.51
CCT4-201ENST00000394440 CTRB1P17538 263 aa11.87□□□□□ -0.51
CCT4-201ENST00000394440 FXYD3Q14802 87 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms