RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 CNIH1O95406 144 aa8.99□□□□□ -0.97
TCOF1-203ENST00000394269 USF1P22415 310 aaPredicted RBP8.99□□□□□ -0.97
TCOF1-203ENST00000394269 TMEM30BQ3MIR4 351 aa8.99□□□□□ -0.97
TCOF1-203ENST00000394269 RNF212Q495C1 297 aa8.99□□□□□ -0.97
TCOF1-203ENST00000394269 CENPVQ7Z7K6 275 aaPredicted RBP8.99□□□□□ -0.97
TCOF1-203ENST00000394269 C1orf159Q96HA4 380 aa8.99□□□□□ -0.97
TCOF1-203ENST00000394269 CELSR1Q9NYQ6 3014 aa8.99□□□□□ -0.97
TCOF1-203ENST00000394269 IGKV1OR2-108A0A075B7D4 117 aa8.99□□□□□ -0.97
TCOF1-203ENST00000394269 LCN2P80188 198 aa8.99□□□□□ -0.97
TCOF1-203ENST00000394269 TMEM241Q24JQ0 296 aa8.99□□□□□ -0.97
TCOF1-203ENST00000394269 HLA-DRB5Q30154 266 aa8.99□□□□□ -0.97
TCOF1-203ENST00000394269 MIR17HGQ75NE6 70 aa8.99□□□□□ -0.97
TCOF1-203ENST00000394269 PDPNQ86YL7 162 aa8.99□□□□□ -0.97
TCOF1-203ENST00000394269 VSTM2AQ8TAG5 236 aa8.99□□□□□ -0.97
TCOF1-203ENST00000394269 ST6GALNAC6Q969X2 333 aa8.99□□□□□ -0.97
TCOF1-203ENST00000394269 PCGF1Q9BSM1 259 aa8.99□□□□□ -0.97
TCOF1-203ENST00000394269 METTL1Q9UBP6 276 aaKnown RBP8.99□□□□□ -0.97
TCOF1-203ENST00000394269 ITPR2Q14571 2701 aa8.99□□□□□ -0.97
TCOF1-203ENST00000394269 TRBV23-1A0A0A0MS06 115 aa8.99□□□□□ -0.97
TCOF1-203ENST00000394269 PRSS46E5RG02 174 aa8.99□□□□□ -0.97
TCOF1-203ENST00000394269 BUB1B-PAK6H3BSN5 160 aa8.99□□□□□ -0.97
TCOF1-203ENST00000394269 LIPFP07098 398 aa8.99□□□□□ -0.97
TCOF1-203ENST00000394269 RNASE2P10153 161 aaKnown RBP8.99□□□□□ -0.97
TCOF1-203ENST00000394269 PRRC2AP48634 2157 aaKnown RBP8.99□□□□□ -0.97
TCOF1-203ENST00000394269 SSBP2P81877 361 aaPredicted RBP8.99□□□□□ -0.97
TCOF1-203ENST00000394269 TMEM177Q53S58 311 aa8.99□□□□□ -0.97
TCOF1-203ENST00000394269 SPNS3Q6ZMD2 512 aa8.99□□□□□ -0.97
TCOF1-203ENST00000394269 MIOXQ9UGB7 285 aa8.99□□□□□ -0.97
TCOF1-203ENST00000394269 CUBNO60494 3623 aa8.99□□□□□ -0.97
TCOF1-203ENST00000394269 VPS13CQ709C8 3753 aa8.98□□□□□ -0.97
TCOF1-203ENST00000394269 LOC105371242A0A075B767 164 aa8.98□□□□□ -0.97
TCOF1-203ENST00000394269 IGHV1-3A0A0C4DH29 117 aa8.98□□□□□ -0.97
TCOF1-203ENST00000394269 MPDU1O75352 247 aa8.98□□□□□ -0.97
TCOF1-203ENST00000394269 AREGP15514 252 aa8.98□□□□□ -0.97
TCOF1-203ENST00000394269 MC5RP33032 325 aa8.98□□□□□ -0.97
TCOF1-203ENST00000394269 CHRNA7P36544 502 aa8.98□□□□□ -0.97
TCOF1-203ENST00000394269 GPR6P46095 362 aaPredicted RBP8.98□□□□□ -0.97
TCOF1-203ENST00000394269 AARDQ4LEZ3 155 aa8.98□□□□□ -0.97
TCOF1-203ENST00000394269 SP5Q6BEB4 398 aaPredicted RBP8.98□□□□□ -0.97
TCOF1-203ENST00000394269 SLC35E1Q96K37 410 aa8.98□□□□□ -0.97
TCOF1-203ENST00000394269 FAM103A1Q9BTL3 118 aaKnown RBP8.98□□□□□ -0.97
TCOF1-203ENST00000394269 PRORYQ9H606 182 aa8.98□□□□□ -0.97
TCOF1-203ENST00000394269 NDUFA4L2Q9NRX3 87 aa8.98□□□□□ -0.97
TCOF1-203ENST00000394269 ZNF257Q9Y2Q1 563 aa8.98□□□□□ -0.97
TCOF1-203ENST00000394269 FCN1O00602 326 aa8.98□□□□□ -0.97
TCOF1-203ENST00000394269 CXCL1P09341 107 aa8.98□□□□□ -0.97
TCOF1-203ENST00000394269 PSG5Q15238 335 aa8.98□□□□□ -0.97
TCOF1-203ENST00000394269 MMDQ15546 238 aa8.98□□□□□ -0.97
TCOF1-203ENST00000394269 POU2AF1Q16633 256 aa8.98□□□□□ -0.97
TCOF1-203ENST00000394269 Q8WTZ3 238 aa8.98□□□□□ -0.97
TCOF1-203ENST00000394269 UHRF2Q96PU4 802 aa8.98□□□□□ -0.97
TCOF1-203ENST00000394269 TIMM23O14925 209 aa8.98□□□□□ -0.97
TCOF1-203ENST00000394269 LY86O95711 162 aa8.98□□□□□ -0.97
TCOF1-203ENST00000394269 OR5G3P0C626 314 aa8.98□□□□□ -0.97
TCOF1-203ENST00000394269 GGACTQ9BVM4 153 aa8.98□□□□□ -0.97
TCOF1-203ENST00000394269 SSBP3Q9BWW4 388 aaPredicted RBP8.98□□□□□ -0.97
TCOF1-203ENST00000394269 GSX1Q9H4S2 264 aaPredicted RBP8.98□□□□□ -0.97
TCOF1-203ENST00000394269 SDF2L1Q9HCN8 221 aa8.98□□□□□ -0.97
TCOF1-203ENST00000394269 BAHCC1Q9P281 2608 aa8.97□□□□□ -0.97
TCOF1-203ENST00000394269 RHOBP62745 196 aa8.97□□□□□ -0.97
TCOF1-203ENST00000394269 ZNF90Q03938 601 aa8.97□□□□□ -0.97
TCOF1-203ENST00000394269 S4R3C0 116 aa8.97□□□□□ -0.97
TCOF1-203ENST00000394269 TRAV5A0A0B4J249 113 aa8.97□□□□□ -0.97
TCOF1-203ENST00000394269 A0A1W2PPI3 338 aa8.97□□□□□ -0.97
TCOF1-203ENST00000394269 MOSP00540 346 aa8.97□□□□□ -0.97
TCOF1-203ENST00000394269 SFTPCP11686 197 aa8.97□□□□□ -0.97
TCOF1-203ENST00000394269 ORM2P19652 201 aa8.97□□□□□ -0.97
TCOF1-203ENST00000394269 RND2P52198 227 aa8.97□□□□□ -0.97
TCOF1-203ENST00000394269 BSXQ3C1V8 233 aa8.97□□□□□ -0.97
TCOF1-203ENST00000394269 SLC16A13Q7RTY0 426 aa8.97□□□□□ -0.97
TCOF1-203ENST00000394269 P2RX4Q99571 388 aa8.97□□□□□ -0.97
TCOF1-203ENST00000394269 LSM4Q9Y4Z0 139 aaKnown RBP8.97□□□□□ -0.97
TCOF1-203ENST00000394269 NCBP2LA6PVI3 153 aaKnown RBP8.96□□□□□ -0.97
TCOF1-203ENST00000394269 IGLV2-23P01705 113 aa8.96□□□□□ -0.97
TCOF1-203ENST00000394269 PRB4P10163 310 aaPredicted RBP8.96□□□□□ -0.97
TCOF1-203ENST00000394269 C21orf62-AS1Q17RA5 79 aa8.96□□□□□ -0.97
TCOF1-203ENST00000394269 TMEM167AQ8TBQ9 72 aa8.96□□□□□ -0.97
TCOF1-203ENST00000394269 FNDC4Q9H6D8 234 aaPredicted RBP8.96□□□□□ -0.97
TCOF1-203ENST00000394269 MANBALQ9NQG1 85 aa8.96□□□□□ -0.97
TCOF1-203ENST00000394269 BIN3Q9NQY0 253 aa8.96□□□□□ -0.97
TCOF1-203ENST00000394269 NPPCP23582 126 aa8.96□□□□□ -0.98
TCOF1-203ENST00000394269 HTR1DP28221 377 aa8.96□□□□□ -0.98
TCOF1-203ENST00000394269 RPL27AP46776 148 aaKnown RBP8.96□□□□□ -0.98
TCOF1-203ENST00000394269 LDLRAD2Q5SZI1 272 aa8.96□□□□□ -0.98
TCOF1-203ENST00000394269 TMEM144Q7Z5S9 345 aa8.96□□□□□ -0.98
TCOF1-203ENST00000394269 NAT8Q9UHE5 227 aa8.96□□□□□ -0.98
TCOF1-203ENST00000394269 CXorf1O96002 111 aa8.96□□□□□ -0.98
TCOF1-203ENST00000394269 IGLV1-47P01700 117 aa8.96□□□□□ -0.98
TCOF1-203ENST00000394269 SUB1P53999 127 aaKnown RBP eCLIP8.96□□□□□ -0.98
TCOF1-203ENST00000394269 CD69Q07108 199 aa8.96□□□□□ -0.98
TCOF1-203ENST00000394269 ELOBQ15370 118 aa8.96□□□□□ -0.98
TCOF1-203ENST00000394269 LINC00311Q8N616 119 aa8.96□□□□□ -0.98
TCOF1-203ENST00000394269 ZNF596Q8TC21 504 aa8.96□□□□□ -0.98
TCOF1-203ENST00000394269 ITLN2Q8WWU7 325 aaPredicted RBP8.96□□□□□ -0.98
TCOF1-203ENST00000394269 MRPL36Q9P0J6 103 aaKnown RBP8.96□□□□□ -0.98
TCOF1-203ENST00000394269 A0A1W2PN81 502 aa8.95□□□□□ -0.98
TCOF1-203ENST00000394269 SCO2A0A1W2PP80 73 aa8.95□□□□□ -0.98
TCOF1-203ENST00000394269 CLDN34H7C241 214 aa8.95□□□□□ -0.98
TCOF1-203ENST00000394269 LINC00869P0C866 280 aa8.95□□□□□ -0.98
TCOF1-203ENST00000394269 GCHFRP30047 84 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms