RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 PVALBP20472 110 aaPredicted RBP4.75□□□□□ -1.65
CASC3-202ENST00000394114 COX7A1P24310 79 aa4.75□□□□□ -1.65
CASC3-202ENST00000394114 EWSR1Q01844 656 aaKnown RBP eCLIP4.75□□□□□ -1.65
CASC3-202ENST00000394114 TMEM267Q0VDI3 215 aaPredicted RBP4.75□□□□□ -1.65
CASC3-202ENST00000394114 TMEM155Q4W5P6 130 aa4.75□□□□□ -1.65
CASC3-202ENST00000394114 TREML4Q6UXN2 200 aa4.75□□□□□ -1.65
CASC3-202ENST00000394114 H2BFWTQ7Z2G1 175 aa4.75□□□□□ -1.65
CASC3-202ENST00000394114 PDZD9Q8IXQ8 264 aa4.75□□□□□ -1.65
CASC3-202ENST00000394114 ZNF525Q8N782 197 aa4.75□□□□□ -1.65
CASC3-202ENST00000394114 NRGNQ92686 78 aa4.75□□□□□ -1.65
CASC3-202ENST00000394114 S1PR3Q99500 378 aa4.75□□□□□ -1.65
CASC3-202ENST00000394114 VPS25Q9BRG1 176 aa4.75□□□□□ -1.65
CASC3-202ENST00000394114 TMEM208Q9BTX3 173 aa4.75□□□□□ -1.65
CASC3-202ENST00000394114 MEGF9Q9H1U4 602 aa4.75□□□□□ -1.65
CASC3-202ENST00000394114 LPAR2Q9HBW0 351 aa4.75□□□□□ -1.65
CASC3-202ENST00000394114 ONECUT1Q9UBC0 465 aa4.75□□□□□ -1.65
CASC3-202ENST00000394114 AUP1Q9Y679 476 aa4.75□□□□□ -1.65
CASC3-202ENST00000394114 ZNF469Q96JG9 3925 aaPredicted RBP4.74□□□□□ -1.65
CASC3-202ENST00000394114 CSPG4Q6UVK1 2322 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 ACANP16112 2415 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 TRAV3A0A0B4J244 114 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 CLEC18AA5D8T8 446 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 NMBP08949 121 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 WNT2P09544 360 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 TPT1P13693 172 aaKnown RBP4.74□□□□□ -1.65
CASC3-202ENST00000394114 LORP23490 312 aaPredicted RBP4.74□□□□□ -1.65
CASC3-202ENST00000394114 GNB2P62879 340 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 PDLIM3Q53GG5 364 aaPredicted RBP4.74□□□□□ -1.65
CASC3-202ENST00000394114 WDR25Q64LD2 544 aaPredicted RBP4.74□□□□□ -1.65
CASC3-202ENST00000394114 SLC25A48Q6ZT89 311 aaKnown RBP4.74□□□□□ -1.65
CASC3-202ENST00000394114 BAP18Q8IXM2 172 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 LRRC75A-AS1Q8N1F1 130 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 CLEC18CQ8NCF0 446 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 OR8B3Q8NGG8 313 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 OR10X1Q8NGY0 326 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 SSMEM1Q8WWF3 244 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 OR8B2Q96RD0 313 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 MRPL20Q9BYC9 149 aaKnown RBP4.74□□□□□ -1.65
CASC3-202ENST00000394114 GEMIN7Q9H840 131 aaKnown RBP4.74□□□□□ -1.65
CASC3-202ENST00000394114 LINC00574Q9H8X3 128 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 WFDC1Q9HC57 220 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 MMP24Q9Y5R2 645 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 RFNGQ9Y644 331 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.74□□□□□ -1.654e-8■■■■■ 30.4
CASC3-202ENST00000394114 PPIAL4CA0A0B4J2A2 164 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 TCF21O43680 179 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 SYNGR2O43760 224 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 GPR137BO60478 399 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 IGKV1-16P04430 117 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 OR9G9P0C7N8 305 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 METTL15P1P0C7V9 234 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 CT45A6P0DMU7 189 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 CT45A5P0DMU8 189 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 CT45A7P0DMV0 189 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 PPIAL4GP0DN37 164 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 IGHV1-8P0DP01 117 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 PAX6P26367 422 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 GPR6P46095 362 aaPredicted RBP4.74□□□□□ -1.65
CASC3-202ENST00000394114 P2RY1P47900 373 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 PAX9P55771 341 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 DLX6P56179 175 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 ARF6P62330 175 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 PNRC1Q12796 327 aaPredicted RBP4.74□□□□□ -1.65
CASC3-202ENST00000394114 CLLU1Q5K131 121 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 C11orf42Q8N5U0 333 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 TMEM252Q8N6L7 170 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 HSD17B11Q8NBQ5 300 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 OR5C1Q8NGR4 320 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 IGFBPL1Q8WX77 278 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 C11orf1Q9H5F2 150 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 LYRM2Q9NU23 88 aaPredicted RBP4.74□□□□□ -1.65
CASC3-202ENST00000394114 DKK2Q9UBU2 259 aa4.74□□□□□ -1.65
CASC3-202ENST00000394114 IGHV3-72A0A0B4J1Y9 119 aa4.73□□□□□ -1.65
CASC3-202ENST00000394114 A0A1W2PRD5 423 aa4.73□□□□□ -1.65
CASC3-202ENST00000394114 A0A1W2PRF3 423 aa4.73□□□□□ -1.65
CASC3-202ENST00000394114 A0A1W2PRM7 423 aa4.73□□□□□ -1.65
CASC3-202ENST00000394114 LINC00862A6NCI5 91 aa4.73□□□□□ -1.65
CASC3-202ENST00000394114 HPRT1P00492 218 aa4.73□□□□□ -1.65
CASC3-202ENST00000394114 MYOD1P15172 320 aa4.73□□□□□ -1.65
CASC3-202ENST00000394114 DYNLT3P51808 116 aa4.73□□□□□ -1.65
CASC3-202ENST00000394114 UBE2KP61086 200 aa4.73□□□□□ -1.65
CASC3-202ENST00000394114 SRSF1Q07955 248 aaKnown RBP eCLIP4.73□□□□□ -1.65
CASC3-202ENST00000394114 HNF4GQ14541 408 aa4.73□□□□□ -1.65
CASC3-202ENST00000394114 MSMO1Q15800 293 aa4.73□□□□□ -1.65
CASC3-202ENST00000394114 SPANXN5Q5MJ07 72 aa4.73□□□□□ -1.65
CASC3-202ENST00000394114 ABHD12Q8N2K0 398 aa4.73□□□□□ -1.65
CASC3-202ENST00000394114 DDB2Q92466 427 aa4.73□□□□□ -1.65
CASC3-202ENST00000394114 QTRT1Q9BXR0 403 aaKnown RBP4.73□□□□□ -1.65
CASC3-202ENST00000394114 NPFFR1Q9GZQ6 430 aa4.73□□□□□ -1.65
CASC3-202ENST00000394114 RBKSQ9H477 322 aa4.73□□□□□ -1.65
CASC3-202ENST00000394114 A0A1W2PPV4 95 aa4.73□□□□□ -1.65
CASC3-202ENST00000394114 SIVA1O15304 175 aa4.73□□□□□ -1.65
CASC3-202ENST00000394114 IFNA17P01571 189 aa4.73□□□□□ -1.65
CASC3-202ENST00000394114 P0C879 139 aa4.73□□□□□ -1.65
CASC3-202ENST00000394114 EFNA4P52798 201 aa4.73□□□□□ -1.65
CASC3-202ENST00000394114 ERVK-16P61578 105 aa4.73□□□□□ -1.65
CASC3-202ENST00000394114 MIDNQ504T8 468 aa4.73□□□□□ -1.65
CASC3-202ENST00000394114 OR8G2PQ6IF36 304 aa4.73□□□□□ -1.65
CASC3-202ENST00000394114 ATRAIDQ6UW56 229 aa4.73□□□□□ -1.65
CASC3-202ENST00000394114 OR4S2Q8NH73 311 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms