RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 TXN2Q99757 166 aa13.48□□□□□ -0.25
PDLIM7-205ENST00000393551 MTFP1Q9UDX5 166 aa13.48□□□□□ -0.25
PDLIM7-205ENST00000393551 TP53TG1Q9Y2A0 90 aa13.48□□□□□ -0.25
PDLIM7-205ENST00000393551 IGHV3OR16-13A0A075B7E8 117 aa13.47□□□□□ -0.25
PDLIM7-205ENST00000393551 IGHV3-74A0A0B4J1X5 117 aa13.47□□□□□ -0.25
PDLIM7-205ENST00000393551 OR4C46A6NHA9 309 aa13.47□□□□□ -0.25
PDLIM7-205ENST00000393551 FAM25AB3EWG3 89 aa13.47□□□□□ -0.25
PDLIM7-205ENST00000393551 FAM25CB3EWG5 89 aa13.47□□□□□ -0.25
PDLIM7-205ENST00000393551 FAM25GB3EWG6 89 aa13.47□□□□□ -0.25
PDLIM7-205ENST00000393551 NUPL2O15504 423 aaKnown RBP13.47□□□□□ -0.25
PDLIM7-205ENST00000393551 RPL35AP18077 110 aaKnown RBP13.47□□□□□ -0.25
PDLIM7-205ENST00000393551 APOC4P55056 127 aa13.47□□□□□ -0.25
PDLIM7-205ENST00000393551 PIGPP57054 158 aa13.47□□□□□ -0.25
PDLIM7-205ENST00000393551 RELQ04864 619 aaPredicted RBP13.47□□□□□ -0.25
PDLIM7-205ENST00000393551 PVRIGQ6DKI7 326 aa13.47□□□□□ -0.25
PDLIM7-205ENST00000393551 APRG1Q8IVJ8 170 aa13.47□□□□□ -0.25
PDLIM7-205ENST00000393551 TMEM116Q8NCL8 245 aa13.47□□□□□ -0.25
PDLIM7-205ENST00000393551 PINX1Q96BK5 328 aaKnown RBP13.47□□□□□ -0.25
PDLIM7-205ENST00000393551 KIR2DL5BA0A0G2JN68 375 aa13.46□□□□□ -0.25
PDLIM7-205ENST00000393551 KIR2DL5BA0A0G2JPC4 375 aa13.46□□□□□ -0.25
PDLIM7-205ENST00000393551 ZNF701M0R085 212 aaPredicted RBP13.46□□□□□ -0.25
PDLIM7-205ENST00000393551 YIF1AO95070 293 aa13.46□□□□□ -0.25
PDLIM7-205ENST00000393551 PGAM2P15259 253 aa13.46□□□□□ -0.25
PDLIM7-205ENST00000393551 ZNF182P17025 639 aaPredicted RBP13.46□□□□□ -0.25
PDLIM7-205ENST00000393551 BMI1P35226 326 aa13.46□□□□□ -0.25
PDLIM7-205ENST00000393551 TNFRSF9Q07011 255 aa13.46□□□□□ -0.25
PDLIM7-205ENST00000393551 RNASE10Q5GAN6 216 aaKnown RBP13.46□□□□□ -0.25
PDLIM7-205ENST00000393551 MZT2AQ6P582 158 aa13.46□□□□□ -0.25
PDLIM7-205ENST00000393551 LYG2Q86SG7 212 aa13.46□□□□□ -0.25
PDLIM7-205ENST00000393551 KIR2DL5AQ8N109 375 aa13.46□□□□□ -0.25
PDLIM7-205ENST00000393551 LILRB2Q8N423 598 aa13.46□□□□□ -0.25
PDLIM7-205ENST00000393551 ARRDC1Q8N5I2 433 aa13.46□□□□□ -0.25
PDLIM7-205ENST00000393551 KIR2DL5BQ8NHK3 375 aa13.46□□□□□ -0.25
PDLIM7-205ENST00000393551 RNF183Q96D59 192 aa13.46□□□□□ -0.25
PDLIM7-205ENST00000393551 ZNF486Q96H40 463 aaPredicted RBP13.46□□□□□ -0.25
PDLIM7-205ENST00000393551 BCL7BQ9BQE9 202 aa13.46□□□□□ -0.25
PDLIM7-205ENST00000393551 MIXL1Q9H2W2 232 aa13.46□□□□□ -0.25
PDLIM7-205ENST00000393551 MAP6D1Q9H9H5 199 aa13.46□□□□□ -0.25
PDLIM7-205ENST00000393551 EXTL2Q9UBQ6 330 aa13.46□□□□□ -0.25
PDLIM7-205ENST00000393551 TRAV14DV4A0A0A6YYC5 116 aa13.45□□□□□ -0.26
PDLIM7-205ENST00000393551 A0A0G2JRQ6 117 aa13.45□□□□□ -0.26
PDLIM7-205ENST00000393551 INS-IGF2F8WCM5 200 aa13.45□□□□□ -0.26
PDLIM7-205ENST00000393551 UBE2CO00762 179 aa13.45□□□□□ -0.26
PDLIM7-205ENST00000393551 ST8SIA3O43173 380 aa13.45□□□□□ -0.26
PDLIM7-205ENST00000393551 APOHP02749 345 aaPredicted RBP13.45□□□□□ -0.26
PDLIM7-205ENST00000393551 ERHP84090 104 aaKnown RBP13.45□□□□□ -0.26
PDLIM7-205ENST00000393551 SP6Q3SY56 376 aa13.45□□□□□ -0.26
PDLIM7-205ENST00000393551 TOMM20LQ6UXN7 152 aa13.45□□□□□ -0.26
PDLIM7-205ENST00000393551 VPS13DQ5THJ4 4388 aa13.44□□□□□ -0.26
PDLIM7-205ENST00000393551 C3orf85A0A1B0GTC6 90 aa13.44□□□□□ -0.26
PDLIM7-205ENST00000393551 CD74P04233 296 aa13.44□□□□□ -0.26
PDLIM7-205ENST00000393551 TFPI2P48307 235 aa13.44□□□□□ -0.26
PDLIM7-205ENST00000393551 PPP5CP53041 499 aa13.44□□□□□ -0.26
PDLIM7-205ENST00000393551 PMS2P11Q13670 270 aa13.44□□□□□ -0.26
PDLIM7-205ENST00000393551 GPR107Q5VW38 600 aa13.44□□□□□ -0.26
PDLIM7-205ENST00000393551 GALNT14Q96FL9 552 aa13.44□□□□□ -0.26
PDLIM7-205ENST00000393551 ZFAND3Q9H8U3 227 aa13.44□□□□□ -0.26
PDLIM7-205ENST00000393551 MRPL36Q9P0J6 103 aaKnown RBP13.44□□□□□ -0.26
PDLIM7-205ENST00000393551 IGKV3-7A0A075B6H7 116 aa13.43□□□□□ -0.26
PDLIM7-205ENST00000393551 GNG7O60262 68 aa13.43□□□□□ -0.26
PDLIM7-205ENST00000393551 RNASE2P10153 161 aaKnown RBP13.43□□□□□ -0.26
PDLIM7-205ENST00000393551 ETV6P41212 452 aa13.43□□□□□ -0.26
PDLIM7-205ENST00000393551 TMBIM6P55061 237 aa13.43□□□□□ -0.26
PDLIM7-205ENST00000393551 Q6ZRM9 215 aa13.43□□□□□ -0.26
PDLIM7-205ENST00000393551 GBGT1Q8N5D6 347 aa13.43□□□□□ -0.26
PDLIM7-205ENST00000393551 STPG3Q8N7X2 389 aa13.43□□□□□ -0.26
PDLIM7-205ENST00000393551 OR13C8Q8NGS7 320 aa13.43□□□□□ -0.26
PDLIM7-205ENST00000393551 TERB2Q8NHR7 220 aa13.43□□□□□ -0.26
PDLIM7-205ENST00000393551 ST8SIA2Q92186 375 aa13.43□□□□□ -0.26
PDLIM7-205ENST00000393551 AP3S1Q92572 193 aa13.43□□□□□ -0.26
PDLIM7-205ENST00000393551 VSIRQ9H7M9 311 aa13.43□□□□□ -0.26
PDLIM7-205ENST00000393551 A0A1B0GU03 582 aa13.42□□□□□ -0.26
PDLIM7-205ENST00000393551 TMEM50AO95807 157 aa13.42□□□□□ -0.26
PDLIM7-205ENST00000393551 TBPP20226 339 aa13.42□□□□□ -0.26
PDLIM7-205ENST00000393551 UCP1P25874 307 aa13.42□□□□□ -0.26
PDLIM7-205ENST00000393551 AKR1C2P52895 323 aa13.42□□□□□ -0.26
PDLIM7-205ENST00000393551 MLANAQ16655 118 aa13.42□□□□□ -0.26
PDLIM7-205ENST00000393551 FAAP20Q6NZ36 180 aa13.42□□□□□ -0.26
PDLIM7-205ENST00000393551 TMEM229BQ8NBD8 167 aa13.42□□□□□ -0.26
PDLIM7-205ENST00000393551 MARCH1Q8TCQ1 289 aa13.42□□□□□ -0.26
PDLIM7-205ENST00000393551 LINC00476Q8WZB0 136 aa13.42□□□□□ -0.26
PDLIM7-205ENST00000393551 FNDC4Q9H6D8 234 aaPredicted RBP13.42□□□□□ -0.26
PDLIM7-205ENST00000393551 DNAH10Q8IVF4 4471 aa13.42□□□□□ -0.26
PDLIM7-205ENST00000393551 AGRNO00468 2067 aa13.41□□□□□ -0.26
PDLIM7-205ENST00000393551 IGHV3-66A0A0C4DH42 116 aa13.41□□□□□ -0.26
PDLIM7-205ENST00000393551 CXorf65A6NEN9 183 aa13.41□□□□□ -0.26
PDLIM7-205ENST00000393551 CTDSP2O14595 271 aa13.41□□□□□ -0.26
PDLIM7-205ENST00000393551 NOL3O60936 208 aaKnown RBP13.41□□□□□ -0.26
PDLIM7-205ENST00000393551 IFNA17P01571 189 aa13.41□□□□□ -0.26
PDLIM7-205ENST00000393551 TCF24Q7RTU0 167 aa13.41□□□□□ -0.26
PDLIM7-205ENST00000393551 SLC35G3Q8N808 338 aa13.41□□□□□ -0.26
PDLIM7-205ENST00000393551 DUSP18Q8NEJ0 188 aa13.41□□□□□ -0.26
PDLIM7-205ENST00000393551 RAB2BQ8WUD1 216 aa13.41□□□□□ -0.26
PDLIM7-205ENST00000393551 RBM38Q9H0Z9 239 aaKnown RBP13.41□□□□□ -0.26
PDLIM7-205ENST00000393551 PUS1Q9Y606 427 aaKnown RBP eCLIP13.41□□□□□ -0.26
PDLIM7-205ENST00000393551 RAB3DO95716 219 aa13.4□□□□□ -0.26
PDLIM7-205ENST00000393551 SNCAP37840 140 aa13.4□□□□□ -0.26
PDLIM7-205ENST00000393551 NPBWR1P48145 328 aa13.4□□□□□ -0.26
PDLIM7-205ENST00000393551 SPCS2Q15005 226 aa13.4□□□□□ -0.26
PDLIM7-205ENST00000393551 BSXQ3C1V8 233 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms