RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 OR10G4Q8NGN3 311 aa6.87□□□□□ -1.31
TDP1-203ENST00000393454 OR10G9Q8NGN4 311 aa6.87□□□□□ -1.31
TDP1-203ENST00000393454 OR10G7Q8NGN6 311 aa6.87□□□□□ -1.31
TDP1-203ENST00000393454 LYPD6BQ8NI32 183 aa6.87□□□□□ -1.31
TDP1-203ENST00000393454 ARPC1AQ92747 370 aa6.87□□□□□ -1.31
TDP1-203ENST00000393454 FNDC10F2Z333 226 aa6.86□□□□□ -1.31
TDP1-203ENST00000393454 J3QLI3 93 aa6.86□□□□□ -1.31
TDP1-203ENST00000393454 EIF3GO75821 320 aaKnown RBP eCLIP6.86□□□□□ -1.31
TDP1-203ENST00000393454 HBE1P02100 147 aa6.86□□□□□ -1.31
TDP1-203ENST00000393454 IGHV4-31P0DP07 118 aa6.86□□□□□ -1.31
TDP1-203ENST00000393454 SRSF3P84103 164 aaKnown RBP6.86□□□□□ -1.31
TDP1-203ENST00000393454 TMEM249Q2WGJ8 235 aa6.86□□□□□ -1.31
TDP1-203ENST00000393454 ACOT6Q3I5F7 207 aaPredicted RBP6.86□□□□□ -1.31
TDP1-203ENST00000393454 KLF17Q5JT82 389 aaPredicted RBP6.86□□□□□ -1.31
TDP1-203ENST00000393454 FAM122CQ6P4D5 195 aa6.86□□□□□ -1.31
TDP1-203ENST00000393454 UQCC3Q6UW78 93 aa6.86□□□□□ -1.31
TDP1-203ENST00000393454 PRSS57Q6UWY2 283 aa6.86□□□□□ -1.31
TDP1-203ENST00000393454 ZNF562Q6V9R5 426 aa6.86□□□□□ -1.31
TDP1-203ENST00000393454 TMEM144Q7Z5S9 345 aa6.86□□□□□ -1.31
TDP1-203ENST00000393454 TMEM219Q86XT9 240 aa6.86□□□□□ -1.31
TDP1-203ENST00000393454 Q8N9W7 124 aa6.86□□□□□ -1.31
TDP1-203ENST00000393454 OR1P1Q8NH06 330 aa6.86□□□□□ -1.31
TDP1-203ENST00000393454 CACNG8Q8WXS5 425 aa6.86□□□□□ -1.31
TDP1-203ENST00000393454 LINC00052Q96N35 136 aa6.86□□□□□ -1.31
TDP1-203ENST00000393454 SSX3Q99909 188 aa6.86□□□□□ -1.31
TDP1-203ENST00000393454 GGTLC1Q9BX51 225 aa6.86□□□□□ -1.31
TDP1-203ENST00000393454 WNT10AQ9GZT5 417 aa6.86□□□□□ -1.31
TDP1-203ENST00000393454 EIF5A2Q9GZV4 153 aaKnown RBP6.86□□□□□ -1.31
TDP1-203ENST00000393454 SLC39A9Q9NUM3 307 aa6.86□□□□□ -1.31
TDP1-203ENST00000393454 LSM4Q9Y4Z0 139 aaKnown RBP6.86□□□□□ -1.31
TDP1-203ENST00000393454 F11RQ9Y624 299 aaKnown RBP6.86□□□□□ -1.31
TDP1-203ENST00000393454 PXMP4Q9Y6I8 212 aa6.86□□□□□ -1.31
TDP1-203ENST00000393454 ABCA1O95477 2261 aa6.86□□□□□ -1.31
TDP1-203ENST00000393454 CR1P17927 2039 aa6.86□□□□□ -1.31
TDP1-203ENST00000393454 IGHV3-21A0A0B4J1V1 117 aa6.86□□□□□ -1.31
TDP1-203ENST00000393454 CYB5BO43169 146 aa6.86□□□□□ -1.31
TDP1-203ENST00000393454 FBP1P09467 338 aa6.86□□□□□ -1.31
TDP1-203ENST00000393454 MFAP2P55001 183 aa6.86□□□□□ -1.31
TDP1-203ENST00000393454 FGF8P55075 233 aaPredicted RBP6.86□□□□□ -1.31
TDP1-203ENST00000393454 CCL20P78556 96 aa6.86□□□□□ -1.31
TDP1-203ENST00000393454 GUK1Q16774 197 aa6.86□□□□□ -1.31
TDP1-203ENST00000393454 ETFRF1Q6IPR1 90 aa6.86□□□□□ -1.31
TDP1-203ENST00000393454 SPSB3Q6PJ21 355 aa6.86□□□□□ -1.31
TDP1-203ENST00000393454 RPP25LQ8N5L8 163 aaKnown RBP6.86□□□□□ -1.31
TDP1-203ENST00000393454 COMMD1Q8N668 190 aa6.86□□□□□ -1.31
TDP1-203ENST00000393454 ZNF114Q8NC26 417 aa6.86□□□□□ -1.31
TDP1-203ENST00000393454 LFNGQ8NES3 379 aa6.86□□□□□ -1.31
TDP1-203ENST00000393454 RCC1LQ96I51 464 aaKnown RBP6.86□□□□□ -1.31
TDP1-203ENST00000393454 SRSF8Q9BRL6 282 aaKnown RBP6.86□□□□□ -1.31
TDP1-203ENST00000393454 ACTR3CQ9C0K3 210 aaPredicted RBP6.86□□□□□ -1.31
TDP1-203ENST00000393454 MEGF9Q9H1U4 602 aa6.86□□□□□ -1.31
TDP1-203ENST00000393454 FNDC4Q9H6D8 234 aaPredicted RBP6.86□□□□□ -1.31
TDP1-203ENST00000393454 SLC25A22Q9H936 323 aa6.86□□□□□ -1.31
TDP1-203ENST00000393454 KCNIP2Q9NS61 270 aa6.86□□□□□ -1.31
TDP1-203ENST00000393454 MAP1LC3B2A6NCE7 125 aa6.85□□□□□ -1.31
TDP1-203ENST00000393454 BTBD17A6NE02 478 aa6.85□□□□□ -1.31
TDP1-203ENST00000393454 KRBOX1C9JBD0 128 aa6.85□□□□□ -1.31
TDP1-203ENST00000393454 HMGB3O15347 200 aaKnown RBP6.85□□□□□ -1.31
TDP1-203ENST00000393454 SOX15O60248 233 aa6.85□□□□□ -1.31
TDP1-203ENST00000393454 M6PRP20645 277 aa6.85□□□□□ -1.31
TDP1-203ENST00000393454 ZP3P21754 424 aa6.85□□□□□ -1.31
TDP1-203ENST00000393454 OR10J1P30954 320 aa6.85□□□□□ -1.31
TDP1-203ENST00000393454 B2MP61769 119 aa6.85□□□□□ -1.31
TDP1-203ENST00000393454 ZNF726P1Q15940 193 aa6.85□□□□□ -1.31
TDP1-203ENST00000393454 LY6EQ16553 131 aa6.85□□□□□ -1.31
TDP1-203ENST00000393454 GCSAMLQ5JQS6 135 aa6.85□□□□□ -1.31
TDP1-203ENST00000393454 SSX7Q7RTT5 188 aa6.85□□□□□ -1.31
TDP1-203ENST00000393454 KRTAP1-3Q8IUG1 177 aa6.85□□□□□ -1.31
TDP1-203ENST00000393454 STPG3Q8N7X2 389 aa6.85□□□□□ -1.31
TDP1-203ENST00000393454 C22orf15Q8WYQ4 148 aa6.85□□□□□ -1.31
TDP1-203ENST00000393454 NPIPB3Q92617 1050 aa6.85□□□□□ -1.31
TDP1-203ENST00000393454 SLC25A33Q9BSK2 321 aa6.85□□□□□ -1.31
TDP1-203ENST00000393454 PBDC1Q9BVG4 233 aa6.85□□□□□ -1.31
TDP1-203ENST00000393454 MAP1LC3BQ9GZQ8 125 aa6.85□□□□□ -1.31
TDP1-203ENST00000393454 SVEP1Q4LDE5 3571 aa6.85□□□□□ -1.31
TDP1-203ENST00000393454 IGHV7-81A0A0B4J1V7 117 aa6.85□□□□□ -1.31
TDP1-203ENST00000393454 SH2D7A6NKC9 451 aaPredicted RBP6.85□□□□□ -1.31
TDP1-203ENST00000393454 CORTO00230 105 aa6.85□□□□□ -1.31
TDP1-203ENST00000393454 RND2P52198 227 aa6.85□□□□□ -1.31
TDP1-203ENST00000393454 NDPQ00604 133 aa6.85□□□□□ -1.31
TDP1-203ENST00000393454 PEA15Q15121 130 aa6.85□□□□□ -1.31
TDP1-203ENST00000393454 HAGHQ16775 308 aa6.85□□□□□ -1.31
TDP1-203ENST00000393454 CYB5R2Q6BCY4 276 aa6.85□□□□□ -1.31
TDP1-203ENST00000393454 WFDC11Q8NEX6 87 aa6.85□□□□□ -1.31
TDP1-203ENST00000393454 MBD3L1Q8WWY6 194 aa6.85□□□□□ -1.31
TDP1-203ENST00000393454 FAM210AQ96ND0 272 aa6.85□□□□□ -1.31
TDP1-203ENST00000393454 PRRC2AP48634 2157 aaKnown RBP6.84□□□□□ -1.31
TDP1-203ENST00000393454 NBPF19A0A087WUL8 3843 aa6.84□□□□□ -1.31
TDP1-203ENST00000393454 IGKV1OR2-108A0A075B7D4 117 aa6.84□□□□□ -1.31
TDP1-203ENST00000393454 CTXND1A0A1B0GTU2 59 aa6.84□□□□□ -1.31
TDP1-203ENST00000393454 A0A1W2PPV4 95 aa6.84□□□□□ -1.31
TDP1-203ENST00000393454 ZFP92A6NM28 416 aa6.84□□□□□ -1.31
TDP1-203ENST00000393454 H3BUX3 64 aa6.84□□□□□ -1.31
TDP1-203ENST00000393454 SMAD7O15105 426 aaKnown RBP6.84□□□□□ -1.31
TDP1-203ENST00000393454 YIF1AO95070 293 aa6.84□□□□□ -1.31
TDP1-203ENST00000393454 MT-CO2P00403 227 aa6.84□□□□□ -1.31
TDP1-203ENST00000393454 HLA-DRB1P01911 266 aa6.84□□□□□ -1.31
TDP1-203ENST00000393454 CTRB1P17538 263 aa6.84□□□□□ -1.31
TDP1-203ENST00000393454 GATA2P23769 480 aaPredicted RBP6.84□□□□□ -1.31
TDP1-203ENST00000393454 RPL29P47914 159 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms