RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 ARL2-SNX15V9GYD0 113 aa7.28□□□□□ -1.24
TDP1-202ENST00000393452 ARHGAP32A7KAX9 2087 aa7.28□□□□□ -1.24
TDP1-202ENST00000393452 RELNP78509 3460 aa7.28□□□□□ -1.24
TDP1-202ENST00000393452 IGHV1-3A0A0C4DH29 117 aa7.28□□□□□ -1.24
TDP1-202ENST00000393452 A0A1W2PPI3 338 aa7.28□□□□□ -1.24
TDP1-202ENST00000393452 PSMB11A5LHX3 300 aa7.28□□□□□ -1.24
TDP1-202ENST00000393452 LY6LH3BQJ8 138 aa7.28□□□□□ -1.24
TDP1-202ENST00000393452 TGOLN2O43493 480 aa7.28□□□□□ -1.24
TDP1-202ENST00000393452 MT-CO2P00403 227 aa7.28□□□□□ -1.24
TDP1-202ENST00000393452 OR5G3P0C626 314 aa7.28□□□□□ -1.24
TDP1-202ENST00000393452 DLX1P56177 255 aa7.28□□□□□ -1.24
TDP1-202ENST00000393452 LINC01551Q86U37 167 aa7.28□□□□□ -1.24
TDP1-202ENST00000393452 DERL1Q9BUN8 251 aa7.28□□□□□ -1.24
TDP1-202ENST00000393452 IGHV3-72A0A0B4J1Y9 119 aa7.27□□□□□ -1.24
TDP1-202ENST00000393452 IGLC7A0M8Q6 106 aa7.27□□□□□ -1.24
TDP1-202ENST00000393452 C22orf46C9J442 243 aa7.27□□□□□ -1.24
TDP1-202ENST00000393452 H7BYZ3 331 aa7.27□□□□□ -1.24
TDP1-202ENST00000393452 PHOX2AO14813 284 aa7.27□□□□□ -1.24
TDP1-202ENST00000393452 FOXH1O75593 365 aa7.27□□□□□ -1.24
TDP1-202ENST00000393452 SOD3P08294 240 aa7.27□□□□□ -1.24
TDP1-202ENST00000393452 SFTPCP11686 197 aa7.27□□□□□ -1.24
TDP1-202ENST00000393452 CD99P14209 185 aa7.27□□□□□ -1.24
TDP1-202ENST00000393452 SUB1P53999 127 aaKnown RBP eCLIP7.27□□□□□ -1.24
TDP1-202ENST00000393452 S100A12P80511 92 aa7.27□□□□□ -1.24
TDP1-202ENST00000393452 KIAA0141Q14154 515 aaPredicted RBP7.27□□□□□ -1.24
TDP1-202ENST00000393452 PRSS8Q16651 343 aa7.27□□□□□ -1.24
TDP1-202ENST00000393452 MIR17HGQ75NE6 70 aa7.27□□□□□ -1.24
TDP1-202ENST00000393452 DTX2Q86UW9 622 aa7.27□□□□□ -1.24
TDP1-202ENST00000393452 MMD2Q8IY49 270 aa7.27□□□□□ -1.24
TDP1-202ENST00000393452 TRBV20OR9-2A0A075B6H5 130 aa7.27□□□□□ -1.25
TDP1-202ENST00000393452 HIST1H2BKO60814 126 aa7.27□□□□□ -1.25
TDP1-202ENST00000393452 LY6HO94772 140 aa7.27□□□□□ -1.25
TDP1-202ENST00000393452 TRGC2P03986 189 aa7.27□□□□□ -1.25
TDP1-202ENST00000393452 S100A8P05109 93 aa7.27□□□□□ -1.25
TDP1-202ENST00000393452 HIST1H2BJP06899 126 aa7.27□□□□□ -1.25
TDP1-202ENST00000393452 LIPFP07098 398 aa7.27□□□□□ -1.25
TDP1-202ENST00000393452 AREGP15514 252 aa7.27□□□□□ -1.25
TDP1-202ENST00000393452 HIST1H2BOP23527 126 aa7.27□□□□□ -1.25
TDP1-202ENST00000393452 GATA2P23769 480 aaPredicted RBP7.27□□□□□ -1.25
TDP1-202ENST00000393452 HIST1H2BBP33778 126 aa7.27□□□□□ -1.25
TDP1-202ENST00000393452 HIST1H2BDP58876 126 aa7.27□□□□□ -1.25
TDP1-202ENST00000393452 HIST1H2BCP62807 126 aa7.27□□□□□ -1.25
TDP1-202ENST00000393452 HIST2H2BEQ16778 126 aa7.27□□□□□ -1.25
TDP1-202ENST00000393452 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.27□□□□□ -1.25
TDP1-202ENST00000393452 PQLC2Q6ZP29 291 aa7.27□□□□□ -1.25
TDP1-202ENST00000393452 LURAP1LQ8IV03 231 aa7.27□□□□□ -1.25
TDP1-202ENST00000393452 ZNF114Q8NC26 417 aa7.27□□□□□ -1.25
TDP1-202ENST00000393452 OR2T6Q8NHC8 308 aa7.27□□□□□ -1.25
TDP1-202ENST00000393452 NEU4Q8WWR8 484 aaPredicted RBP7.27□□□□□ -1.25
TDP1-202ENST00000393452 HIST1H2BHQ93079 126 aa7.27□□□□□ -1.25
TDP1-202ENST00000393452 C11orf52Q96A22 123 aa7.27□□□□□ -1.25
TDP1-202ENST00000393452 ZNF503Q96F45 646 aa7.27□□□□□ -1.25
TDP1-202ENST00000393452 TIMD4Q96H15 378 aa7.27□□□□□ -1.25
TDP1-202ENST00000393452 HIST1H2BNQ99877 126 aa7.27□□□□□ -1.25
TDP1-202ENST00000393452 HIST1H2BMQ99879 126 aa7.27□□□□□ -1.25
TDP1-202ENST00000393452 SIGLEC9Q9Y336 463 aa7.27□□□□□ -1.25
TDP1-202ENST00000393452 INSIG2Q9Y5U4 225 aa7.27□□□□□ -1.25
TDP1-202ENST00000393452 SCO2A0A1W2PP80 73 aa7.26□□□□□ -1.25
TDP1-202ENST00000393452 ENSAO43768 121 aaKnown RBP7.26□□□□□ -1.25
TDP1-202ENST00000393452 ACTL6BO94805 426 aa7.26□□□□□ -1.25
TDP1-202ENST00000393452 CRYGCP07315 174 aa7.26□□□□□ -1.25
TDP1-202ENST00000393452 MEOX2P50222 304 aa7.26□□□□□ -1.25
TDP1-202ENST00000393452 LY6DQ14210 128 aa7.26□□□□□ -1.25
TDP1-202ENST00000393452 PSG5Q15238 335 aa7.26□□□□□ -1.25
TDP1-202ENST00000393452 THAP8Q8NA92 274 aa7.26□□□□□ -1.25
TDP1-202ENST00000393452 TMEM37Q8WXS4 190 aa7.26□□□□□ -1.25
TDP1-202ENST00000393452 TMEM167BQ9NRX6 74 aa7.26□□□□□ -1.25
TDP1-202ENST00000393452 TECRQ9NZ01 308 aaKnown RBP7.26□□□□□ -1.25
TDP1-202ENST00000393452 AMMECR1Q9Y4X0 333 aaPredicted RBP7.26□□□□□ -1.25
TDP1-202ENST00000393452 IGKV1D-37A0A075B6S9 117 aa7.26□□□□□ -1.25
TDP1-202ENST00000393452 HOXA5P20719 270 aa7.26□□□□□ -1.25
TDP1-202ENST00000393452 CNTFRP26992 372 aa7.26□□□□□ -1.25
TDP1-202ENST00000393452 GALR1P47211 349 aa7.26□□□□□ -1.25
TDP1-202ENST00000393452 PRB3Q04118 309 aaPredicted RBP7.26□□□□□ -1.25
TDP1-202ENST00000393452 MRPL41Q8IXM3 137 aaKnown RBP7.26□□□□□ -1.25
TDP1-202ENST00000393452 RPEQ96AT9 228 aa7.26□□□□□ -1.25
TDP1-202ENST00000393452 ACY3Q96HD9 319 aa7.26□□□□□ -1.25
TDP1-202ENST00000393452 RNF5Q99942 180 aa7.26□□□□□ -1.25
TDP1-202ENST00000393452 SLC25A33Q9BSK2 321 aa7.26□□□□□ -1.25
TDP1-202ENST00000393452 MRPL32Q9BYC8 188 aaKnown RBP7.26□□□□□ -1.25
TDP1-202ENST00000393452 ABCA1O95477 2261 aa7.26□□□□□ -1.25
TDP1-202ENST00000393452 TMEM8BA6NDV4 472 aa7.25□□□□□ -1.25
TDP1-202ENST00000393452 GGCTO75223 188 aaKnown RBP7.25□□□□□ -1.25
TDP1-202ENST00000393452 COX7A1P24310 79 aa7.25□□□□□ -1.25
TDP1-202ENST00000393452 S100PP25815 95 aa7.25□□□□□ -1.25
TDP1-202ENST00000393452 SRP14P37108 136 aaKnown RBP7.25□□□□□ -1.25
TDP1-202ENST00000393452 RPL27AP46776 148 aaKnown RBP7.25□□□□□ -1.25
TDP1-202ENST00000393452 COMPP49747 757 aaPredicted RBP7.25□□□□□ -1.25
TDP1-202ENST00000393452 TAS2R45P59539 299 aa7.25□□□□□ -1.25
TDP1-202ENST00000393452 SSBP2P81877 361 aaPredicted RBP7.25□□□□□ -1.25
TDP1-202ENST00000393452 PAX2Q02962 417 aa7.25□□□□□ -1.25
TDP1-202ENST00000393452 LDLRAD2Q5SZI1 272 aa7.25□□□□□ -1.25
TDP1-202ENST00000393452 OR11H6Q8NGC7 330 aa7.25□□□□□ -1.25
TDP1-202ENST00000393452 OR5B12Q96R08 314 aa7.25□□□□□ -1.25
TDP1-202ENST00000393452 RNF2Q99496 336 aa7.25□□□□□ -1.25
TDP1-202ENST00000393452 ELOVL1Q9BW60 279 aa7.25□□□□□ -1.25
TDP1-202ENST00000393452 SRD5A3Q9H8P0 318 aa7.25□□□□□ -1.25
TDP1-202ENST00000393452 CHODLQ9H9P2 273 aa7.25□□□□□ -1.25
TDP1-202ENST00000393452 A0A1W2PPR1 153 aa7.25□□□□□ -1.25
TDP1-202ENST00000393452 TCRBV4S1A1TA0A5B7 111 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms