RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 PARD6GQ9BYG4 376 aaPredicted RBP10.27□□□□□ -0.77
USP44-202ENST00000393091 TRAV14DV4A0A0A6YYC5 116 aa10.26□□□□□ -0.77
USP44-202ENST00000393091 RAB32Q13637 225 aa10.26□□□□□ -0.77
USP44-202ENST00000393091 C10orf99Q6UWK7 81 aa10.26□□□□□ -0.77
USP44-202ENST00000393091 OR4X1Q8NH49 305 aa10.26□□□□□ -0.77
USP44-202ENST00000393091 KLK15Q9H2R5 256 aa10.26□□□□□ -0.77
USP44-202ENST00000393091 RPS10-NUDT3A0A1W2PQS6 291 aa10.26□□□□□ -0.77
USP44-202ENST00000393091 RPLP1P05386 114 aaKnown RBP10.26□□□□□ -0.77
USP44-202ENST00000393091 POLR2GP62487 172 aaKnown RBP eCLIP10.26□□□□□ -0.77
USP44-202ENST00000393091 BAXQ07812 192 aa10.26□□□□□ -0.77
USP44-202ENST00000393091 ARSJQ5FYB0 599 aaPredicted RBP10.26□□□□□ -0.77
USP44-202ENST00000393091 MDFIQ99750 246 aa10.26□□□□□ -0.77
USP44-202ENST00000393091 H0YIZ8 118 aa10.26□□□□□ -0.77
USP44-202ENST00000393091 DLK1P80370 383 aa10.26□□□□□ -0.77
USP44-202ENST00000393091 RHOGP84095 191 aa10.26□□□□□ -0.77
USP44-202ENST00000393091 ATP5G2Q06055 141 aa10.26□□□□□ -0.77
USP44-202ENST00000393091 SPSB3Q6PJ21 355 aa10.26□□□□□ -0.77
USP44-202ENST00000393091 THAP8Q8NA92 274 aa10.26□□□□□ -0.77
USP44-202ENST00000393091 OR5T1Q8NG75 326 aa10.26□□□□□ -0.77
USP44-202ENST00000393091 PPP1R1CQ8WVI7 109 aa10.26□□□□□ -0.77
USP44-202ENST00000393091 EEF1AKMT3Q96AZ1 226 aa10.26□□□□□ -0.77
USP44-202ENST00000393091 HEYLQ9NQ87 328 aaPredicted RBP10.26□□□□□ -0.77
USP44-202ENST00000393091 C13orf42A0A1B0GVH6 325 aa10.25□□□□□ -0.77
USP44-202ENST00000393091 NDUFB8O95169 186 aa10.25□□□□□ -0.77
USP44-202ENST00000393091 TRGV3P03979 118 aa10.25□□□□□ -0.77
USP44-202ENST00000393091 PVALBP20472 110 aaPredicted RBP10.25□□□□□ -0.77
USP44-202ENST00000393091 RAB11AP62491 216 aa10.25□□□□□ -0.77
USP44-202ENST00000393091 CD69Q07108 199 aa10.25□□□□□ -0.77
USP44-202ENST00000393091 CCDC140Q96MF4 163 aa10.25□□□□□ -0.77
USP44-202ENST00000393091 FBXL7Q9UJT9 491 aa10.25□□□□□ -0.77
USP44-202ENST00000393091 STRAPQ9Y3F4 350 aaKnown RBP10.25□□□□□ -0.77
USP44-202ENST00000393091 TEP1Q99973 2627 aaKnown RBP10.25□□□□□ -0.77
USP44-202ENST00000393091 PLXNB1O43157 2135 aa10.25□□□□□ -0.77
USP44-202ENST00000393091 MYCNOSP40205 109 aa10.25□□□□□ -0.77
USP44-202ENST00000393091 C12orf54Q6X4T0 127 aa10.25□□□□□ -0.77
USP44-202ENST00000393091 TAF15Q92804 592 aaKnown RBP eCLIP10.25□□□□□ -0.77
USP44-202ENST00000393091 PSENENQ9NZ42 101 aa10.25□□□□□ -0.77
USP44-202ENST00000393091 HSPB1P04792 205 aaKnown RBP10.24□□□□□ -0.77
USP44-202ENST00000393091 BSCL2Q96G97 398 aaPredicted RBP10.24□□□□□ -0.77
USP44-202ENST00000393091 LINC00527Q9UJ94 153 aa10.24□□□□□ -0.77
USP44-202ENST00000393091 TCRBV4S1A1TA0A5B7 111 aa10.24□□□□□ -0.77
USP44-202ENST00000393091 SNCAP37840 140 aa10.24□□□□□ -0.77
USP44-202ENST00000393091 BCAP31P51572 246 aa10.24□□□□□ -0.77
USP44-202ENST00000393091 ATP6V1FQ16864 119 aa10.24□□□□□ -0.77
USP44-202ENST00000393091 C11orf87Q6NUJ2 197 aa10.24□□□□□ -0.77
USP44-202ENST00000393091 ETV3LQ6ZN32 361 aa10.24□□□□□ -0.77
USP44-202ENST00000393091 AQP10Q96PS8 301 aa10.24□□□□□ -0.77
USP44-202ENST00000393091 CITED2Q99967 270 aaPredicted RBP10.24□□□□□ -0.77
USP44-202ENST00000393091 TRAV30A0A087WSZ9 112 aa10.24□□□□□ -0.77
USP44-202ENST00000393091 LGALS9O00182 355 aa10.24□□□□□ -0.77
USP44-202ENST00000393091 SIX6O95475 246 aa10.24□□□□□ -0.77
USP44-202ENST00000393091 RLN2P04090 185 aa10.24□□□□□ -0.77
USP44-202ENST00000393091 TPPP2P59282 170 aa10.24□□□□□ -0.77
USP44-202ENST00000393091 REC114Q7Z4M0 266 aa10.24□□□□□ -0.77
USP44-202ENST00000393091 ZNF329Q86UD4 541 aa10.24□□□□□ -0.77
USP44-202ENST00000393091 FNDC4Q9H6D8 234 aaPredicted RBP10.24□□□□□ -0.77
USP44-202ENST00000393091 GNB4Q9HAV0 340 aa10.24□□□□□ -0.77
USP44-202ENST00000393091 SSSCA1O60232 199 aa10.23□□□□□ -0.77
USP44-202ENST00000393091 C15orf32Q32M92 178 aa10.23□□□□□ -0.77
USP44-202ENST00000393091 ST6GAL2Q96JF0 529 aa10.23□□□□□ -0.77
USP44-202ENST00000393091 HMSDA8MTL9 139 aa10.23□□□□□ -0.77
USP44-202ENST00000393091 WIPF1O43516 503 aa10.23□□□□□ -0.77
USP44-202ENST00000393091 REG1AP05451 166 aa10.23□□□□□ -0.77
USP44-202ENST00000393091 PF4V1P10720 104 aa10.23□□□□□ -0.77
USP44-202ENST00000393091 SULT1A1P50225 295 aa10.23□□□□□ -0.77
USP44-202ENST00000393091 HAPLN4Q86UW8 402 aa10.23□□□□□ -0.77
USP44-202ENST00000393091 GPHB5Q86YW7 130 aa10.23□□□□□ -0.77
USP44-202ENST00000393091 UXS1Q8NBZ7 420 aa10.23□□□□□ -0.77
USP44-202ENST00000393091 SCARB1Q8WTV0 552 aa10.23□□□□□ -0.77
USP44-202ENST00000393091 WDR89Q96FK6 387 aaPredicted RBP10.23□□□□□ -0.77
USP44-202ENST00000393091 SLC25A31Q9H0C2 315 aa10.23□□□□□ -0.77
USP44-202ENST00000393091 SIGLEC8Q9NYZ4 499 aa10.23□□□□□ -0.77
USP44-202ENST00000393091 DEFA4P12838 97 aa10.22□□□□□ -0.77
USP44-202ENST00000393091 OR5AC2Q9NZP5 309 aa10.22□□□□□ -0.77
USP44-202ENST00000393091 GSKIPQ9P0R6 139 aa10.22□□□□□ -0.77
USP44-202ENST00000393091 C2CD3Q4AC94 2353 aa10.22□□□□□ -0.77
USP44-202ENST00000393091 MFAP4P55083 255 aa10.22□□□□□ -0.77
USP44-202ENST00000393091 YPEL3P61236 119 aaPredicted RBP10.22□□□□□ -0.77
USP44-202ENST00000393091 OR1S2Q8NGQ3 325 aa10.22□□□□□ -0.77
USP44-202ENST00000393091 PEF1Q9UBV8 284 aaKnown RBP10.22□□□□□ -0.77
USP44-202ENST00000393091 FAM25EA8MYX2 175 aa10.22□□□□□ -0.77
USP44-202ENST00000393091 WRBO00258 174 aa10.22□□□□□ -0.77
USP44-202ENST00000393091 CLN5O75503 358 aa10.22□□□□□ -0.77
USP44-202ENST00000393091 MT-CO2P00403 227 aa10.22□□□□□ -0.77
USP44-202ENST00000393091 OR8U8P0C7N1 319 aa10.22□□□□□ -0.77
USP44-202ENST00000393091 ELLP55199 621 aaPredicted RBP10.22□□□□□ -0.77
USP44-202ENST00000393091 SPINK9Q5DT21 86 aa10.22□□□□□ -0.77
USP44-202ENST00000393091 PRR31Q5SQ13 230 aa10.22□□□□□ -0.77
USP44-202ENST00000393091 TMEM252Q8N6L7 170 aa10.22□□□□□ -0.77
USP44-202ENST00000393091 WFDC9Q8NEX5 89 aa10.22□□□□□ -0.77
USP44-202ENST00000393091 MAGT1Q9H0U3 335 aa10.22□□□□□ -0.77
USP44-202ENST00000393091 RANGRFQ9HD47 186 aaPredicted RBP10.22□□□□□ -0.77
USP44-202ENST00000393091 C21orf62Q9NYP8 219 aa10.22□□□□□ -0.77
USP44-202ENST00000393091 A8MWP6 167 aa10.21□□□□□ -0.77
USP44-202ENST00000393091 OR2J3O76001 311 aa10.21□□□□□ -0.77
USP44-202ENST00000393091 ZNF345Q14585 488 aa10.21□□□□□ -0.77
USP44-202ENST00000393091 PINX1Q96BK5 328 aaKnown RBP10.21□□□□□ -0.77
USP44-202ENST00000393091 LSM4Q9Y4Z0 139 aaKnown RBP10.21□□□□□ -0.77
USP44-202ENST00000393091 IAPPP10997 89 aa10.21□□□□□ -0.78
USP44-202ENST00000393091 S100A11P31949 105 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms