RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 MAJINQ3KP22 176 aa12.35□□□□□ -0.43
SHTN1-204ENST00000392903 MIC13Q5XKP0 118 aa12.35□□□□□ -0.43
SHTN1-204ENST00000392903 IGFL3Q6UXB1 125 aa12.35□□□□□ -0.43
SHTN1-204ENST00000392903 FAM19A2Q8N3H0 131 aa12.35□□□□□ -0.43
SHTN1-204ENST00000392903 ZNF439Q8NDP4 499 aa12.35□□□□□ -0.43
SHTN1-204ENST00000392903 BSNQ9UPA5 3926 aa12.34□□□□□ -0.43
SHTN1-204ENST00000392903 IGHV3-13P01766 116 aa12.34□□□□□ -0.43
SHTN1-204ENST00000392903 IGHV3-7P01780 117 aa12.34□□□□□ -0.43
SHTN1-204ENST00000392903 PRDX2P32119 198 aa12.34□□□□□ -0.43
SHTN1-204ENST00000392903 ATOH7Q8N100 152 aa12.34□□□□□ -0.43
SHTN1-204ENST00000392903 OSTCQ9NRP0 149 aa12.34□□□□□ -0.43
SHTN1-204ENST00000392903 SELENOVP59797 346 aa12.33□□□□□ -0.43
SHTN1-204ENST00000392903 RHOGP84095 191 aa12.33□□□□□ -0.43
SHTN1-204ENST00000392903 Q6ZS92 163 aa12.33□□□□□ -0.43
SHTN1-204ENST00000392903 C22orf34Q6ZV56 151 aa12.33□□□□□ -0.43
SHTN1-204ENST00000392903 SMIM15Q7Z3B0 74 aa12.33□□□□□ -0.43
SHTN1-204ENST00000392903 RBMXL3Q8N7X1 1067 aaKnown RBP12.33□□□□□ -0.43
SHTN1-204ENST00000392903 PRSS46E5RG02 174 aa12.33□□□□□ -0.44
SHTN1-204ENST00000392903 SPRY3O43610 288 aa12.33□□□□□ -0.44
SHTN1-204ENST00000392903 SPINK4O60575 86 aa12.33□□□□□ -0.44
SHTN1-204ENST00000392903 GNG4P50150 75 aa12.33□□□□□ -0.44
SHTN1-204ENST00000392903 CENPWQ5EE01 88 aa12.33□□□□□ -0.44
SHTN1-204ENST00000392903 PRR7Q8TB68 274 aa12.33□□□□□ -0.44
SHTN1-204ENST00000392903 MS4A5Q9H3V2 200 aa12.33□□□□□ -0.44
SHTN1-204ENST00000392903 ARL2-SNX15V9GYD0 113 aa12.33□□□□□ -0.44
SHTN1-204ENST00000392903 H0YJW9 148 aa12.32□□□□□ -0.44
SHTN1-204ENST00000392903 NTF3P20783 257 aa12.32□□□□□ -0.44
SHTN1-204ENST00000392903 LCN12Q6JVE5 192 aa12.32□□□□□ -0.44
SHTN1-204ENST00000392903 ZNRF1Q8ND25 227 aa12.32□□□□□ -0.44
SHTN1-204ENST00000392903 OR2V2Q96R30 315 aa12.32□□□□□ -0.44
SHTN1-204ENST00000392903 PSG11Q9UQ72 335 aa12.32□□□□□ -0.44
SHTN1-204ENST00000392903 IGKV1D-17A0A075B6S4 117 aa12.32□□□□□ -0.44
SHTN1-204ENST00000392903 FAM27E3Q08E93 113 aa12.32□□□□□ -0.44
SHTN1-204ENST00000392903 EFNB3Q15768 340 aa12.32□□□□□ -0.44
SHTN1-204ENST00000392903 FAM201AQ5SY85 155 aa12.32□□□□□ -0.44
SHTN1-204ENST00000392903 LSM4Q9Y4Z0 139 aaKnown RBP12.32□□□□□ -0.44
SHTN1-204ENST00000392903 CUL9Q8IWT3 2517 aa12.32□□□□□ -0.44
SHTN1-204ENST00000392903 HELTA6NFD8 242 aa12.31□□□□□ -0.44
SHTN1-204ENST00000392903 TBR1Q16650 682 aa12.31□□□□□ -0.44
SHTN1-204ENST00000392903 LRRC10Q5BKY1 277 aa12.31□□□□□ -0.44
SHTN1-204ENST00000392903 MOGAT3Q86VF5 341 aa12.31□□□□□ -0.44
SHTN1-204ENST00000392903 C18orf32Q8TCD1 76 aa12.31□□□□□ -0.44
SHTN1-204ENST00000392903 SEPSECSQ9HD40 501 aaKnown RBP12.31□□□□□ -0.44
SHTN1-204ENST00000392903 SMIM27A0A1W2PRY6 76 aa12.31□□□□□ -0.44
SHTN1-204ENST00000392903 LINC00473A8K010 186 aa12.31□□□□□ -0.44
SHTN1-204ENST00000392903 ISLRO14498 428 aa12.31□□□□□ -0.44
SHTN1-204ENST00000392903 APCSP02743 223 aa12.31□□□□□ -0.44
SHTN1-204ENST00000392903 VAMP3Q15836 100 aa12.31□□□□□ -0.44
SHTN1-204ENST00000392903 TIMM23BQ5SRD1 257 aa12.31□□□□□ -0.44
SHTN1-204ENST00000392903 C1orf185Q5T7R7 199 aa12.31□□□□□ -0.44
SHTN1-204ENST00000392903 GCSAMQ8N6F7 178 aa12.31□□□□□ -0.44
SHTN1-204ENST00000392903 RNASE7Q9H1E1 156 aaKnown RBP12.31□□□□□ -0.44
SHTN1-204ENST00000392903 DSCAMO60469 2012 aa12.31□□□□□ -0.44
SHTN1-204ENST00000392903 M0QZ24 198 aa12.3□□□□□ -0.44
SHTN1-204ENST00000392903 OR9G9P0C7N8 305 aa12.3□□□□□ -0.44
SHTN1-204ENST00000392903 LINC00869P0C866 280 aa12.3□□□□□ -0.44
SHTN1-204ENST00000392903 IGLL1P15814 213 aa12.3□□□□□ -0.44
SHTN1-204ENST00000392903 SLC35B1P78383 322 aa12.3□□□□□ -0.44
SHTN1-204ENST00000392903 SPATA31B1PQ5VZV4 182 aa12.3□□□□□ -0.44
SHTN1-204ENST00000392903 DOLPP1Q86YN1 238 aa12.3□□□□□ -0.44
SHTN1-204ENST00000392903 OR8B3Q8NGG8 313 aa12.3□□□□□ -0.44
SHTN1-204ENST00000392903 C1orf159Q96HA4 380 aa12.3□□□□□ -0.44
SHTN1-204ENST00000392903 OR8B2Q96RD0 313 aa12.3□□□□□ -0.44
SHTN1-204ENST00000392903 FAM181BA6NEQ2 426 aa12.3□□□□□ -0.44
SHTN1-204ENST00000392903 FAM90A9PA6NNJ1 464 aa12.3□□□□□ -0.44
SHTN1-204ENST00000392903 PQLC2Q6ZP29 291 aa12.3□□□□□ -0.44
SHTN1-204ENST00000392903 SSMEM1Q8WWF3 244 aa12.3□□□□□ -0.44
SHTN1-204ENST00000392903 FAM122AQ96E09 287 aa12.3□□□□□ -0.44
SHTN1-204ENST00000392903 HSD17B10Q99714 261 aaKnown RBP12.3□□□□□ -0.44
SHTN1-204ENST00000392903 SRRM5B3KS81 715 aa12.29□□□□□ -0.44
SHTN1-204ENST00000392903 C15orf65H3BRN8 121 aa12.29□□□□□ -0.44
SHTN1-204ENST00000392903 SPINT2O43291 252 aa12.29□□□□□ -0.44
SHTN1-204ENST00000392903 FOXH1O75593 365 aa12.29□□□□□ -0.44
SHTN1-204ENST00000392903 VDAC2P45880 294 aaPredicted RBP12.29□□□□□ -0.44
SHTN1-204ENST00000392903 TCL1AP56279 114 aa12.29□□□□□ -0.44
SHTN1-204ENST00000392903 FXYD3Q14802 87 aa12.29□□□□□ -0.44
SHTN1-204ENST00000392903 MRPL54Q6P161 138 aaKnown RBP12.29□□□□□ -0.44
SHTN1-204ENST00000392903 FAM169BQ8N8A8 192 aa12.29□□□□□ -0.44
SHTN1-204ENST00000392903 SLC24A4Q8NFF2 622 aa12.29□□□□□ -0.44
SHTN1-204ENST00000392903 FAM234AQ9H0X4 552 aa12.29□□□□□ -0.44
SHTN1-204ENST00000392903 CST9LQ9H4G1 147 aa12.29□□□□□ -0.44
SHTN1-204ENST00000392903 NPVFQ9HCQ7 196 aa12.29□□□□□ -0.44
SHTN1-204ENST00000392903 TIGITQ495A1 244 aa12.29□□□□□ -0.44
SHTN1-204ENST00000392903 OCIAD2Q56VL3 154 aa12.29□□□□□ -0.44
SHTN1-204ENST00000392903 EBLN2Q6P2I7 272 aa12.29□□□□□ -0.44
SHTN1-204ENST00000392903 ITLN1Q8WWA0 313 aa12.29□□□□□ -0.44
SHTN1-204ENST00000392903 VPS25Q9BRG1 176 aa12.29□□□□□ -0.44
SHTN1-204ENST00000392903 HEYLQ9NQ87 328 aaPredicted RBP12.29□□□□□ -0.44
SHTN1-204ENST00000392903 GNG12Q9UBI6 72 aa12.29□□□□□ -0.44
SHTN1-204ENST00000392903 IL19Q9UHD0 177 aa12.29□□□□□ -0.44
SHTN1-204ENST00000392903 GLRXP35754 106 aa12.28□□□□□ -0.44
SHTN1-204ENST00000392903 MZT1Q08AG7 82 aa12.28□□□□□ -0.44
SHTN1-204ENST00000392903 SLAQ13239 276 aa12.28□□□□□ -0.44
SHTN1-204ENST00000392903 RASL11AQ6T310 242 aa12.28□□□□□ -0.44
SHTN1-204ENST00000392903 STPG3Q8N7X2 389 aa12.28□□□□□ -0.44
SHTN1-204ENST00000392903 OR52E5Q8NH55 327 aa12.28□□□□□ -0.44
SHTN1-204ENST00000392903 WIPF2Q8TF74 440 aaPredicted RBP12.28□□□□□ -0.44
SHTN1-204ENST00000392903 CORO2AQ92828 525 aa12.28□□□□□ -0.44
SHTN1-204ENST00000392903 SH3BGRL2Q9UJC5 107 aa12.28□□□□□ -0.44
SHTN1-204ENST00000392903 HCFC1P51610 2035 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms