RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 TEX45Q8NA69 505 aa20.6■□□□□ 0.89
SMARCD3-203ENST00000392811 OR5T1Q8NG75 326 aa20.6■□□□□ 0.89
SMARCD3-203ENST00000392811 RNASEH2CQ8TDP1 164 aaKnown RBP20.6■□□□□ 0.89
SMARCD3-203ENST00000392811 C12orf57Q99622 126 aa20.6■□□□□ 0.89
SMARCD3-203ENST00000392811 FNDC4Q9H6D8 234 aaPredicted RBP20.6■□□□□ 0.89
SMARCD3-203ENST00000392811 SCO2A0A1W2PP80 73 aa20.6■□□□□ 0.89
SMARCD3-203ENST00000392811 SUB1P53999 127 aaKnown RBP eCLIP20.6■□□□□ 0.89
SMARCD3-203ENST00000392811 ANAPC16Q96DE5 110 aa20.6■□□□□ 0.89
SMARCD3-203ENST00000392811 ONECUT1Q9UBC0 465 aa20.6■□□□□ 0.89
SMARCD3-203ENST00000392811 C22orf46C9J442 243 aa20.59■□□□□ 0.89
SMARCD3-203ENST00000392811 GALR1P47211 349 aa20.59■□□□□ 0.89
SMARCD3-203ENST00000392811 LY6G5BQ8NDX9 201 aa20.59■□□□□ 0.89
SMARCD3-203ENST00000392811 LRBAP50851 2863 aa20.59■□□□□ 0.89
SMARCD3-203ENST00000392811 REG1AP05451 166 aa20.58■□□□□ 0.89
SMARCD3-203ENST00000392811 CRYGBP07316 175 aa20.58■□□□□ 0.89
SMARCD3-203ENST00000392811 PRSS8Q16651 343 aa20.58■□□□□ 0.89
SMARCD3-203ENST00000392811 PNKDQ8N490 385 aa20.58■□□□□ 0.89
SMARCD3-203ENST00000392811 LIPFP07098 398 aa20.58■□□□□ 0.88
SMARCD3-203ENST00000392811 OR5G3P0C626 314 aa20.58■□□□□ 0.88
SMARCD3-203ENST00000392811 SSBP2P81877 361 aaPredicted RBP20.58■□□□□ 0.88
SMARCD3-203ENST00000392811 TIMD4Q96H15 378 aa20.58■□□□□ 0.88
SMARCD3-203ENST00000392811 OR5B12Q96R08 314 aa20.58■□□□□ 0.88
SMARCD3-203ENST00000392811 ELOVL1Q9BW60 279 aa20.58■□□□□ 0.88
SMARCD3-203ENST00000392811 AURKAIP1Q9NWT8 199 aaPredicted RBP20.58■□□□□ 0.88
SMARCD3-203ENST00000392811 COL6A6A6NMZ7 2263 aa20.57■□□□□ 0.88
SMARCD3-203ENST00000392811 MEOX2P50222 304 aa20.57■□□□□ 0.88
SMARCD3-203ENST00000392811 PSG5Q15238 335 aa20.57■□□□□ 0.88
SMARCD3-203ENST00000392811 MMD2Q8IY49 270 aa20.57■□□□□ 0.88
SMARCD3-203ENST00000392811 ZNF114Q8NC26 417 aa20.57■□□□□ 0.88
SMARCD3-203ENST00000392811 PYGO2Q9BRQ0 406 aa20.57■□□□□ 0.88
SMARCD3-203ENST00000392811 C19orf24Q9BVV8 132 aa20.57■□□□□ 0.88
SMARCD3-203ENST00000392811 PRORYQ9H606 182 aa20.57■□□□□ 0.88
SMARCD3-203ENST00000392811 TECRQ9NZ01 308 aaKnown RBP20.57■□□□□ 0.88
SMARCD3-203ENST00000392811 NAV3Q8IVL0 2385 aa20.57■□□□□ 0.88
SMARCD3-203ENST00000392811 TRBV20OR9-2A0A075B6H5 130 aa20.56■□□□□ 0.88
SMARCD3-203ENST00000392811 IGLC7A0M8Q6 106 aa20.56■□□□□ 0.88
SMARCD3-203ENST00000392811 PGPEP1LA6NFU8 196 aa20.56■□□□□ 0.88
SMARCD3-203ENST00000392811 TGOLN2O43493 480 aa20.56■□□□□ 0.88
SMARCD3-203ENST00000392811 HIST1H2BKO60814 126 aa20.56■□□□□ 0.88
SMARCD3-203ENST00000392811 HIST1H2BJP06899 126 aa20.56■□□□□ 0.88
SMARCD3-203ENST00000392811 HIST1H2BOP23527 126 aa20.56■□□□□ 0.88
SMARCD3-203ENST00000392811 S100PP25815 95 aa20.56■□□□□ 0.88
SMARCD3-203ENST00000392811 HIST1H2BBP33778 126 aa20.56■□□□□ 0.88
SMARCD3-203ENST00000392811 HIST1H2BDP58876 126 aa20.56■□□□□ 0.88
SMARCD3-203ENST00000392811 HIST1H2BCP62807 126 aa20.56■□□□□ 0.88
SMARCD3-203ENST00000392811 HIST2H2BEQ16778 126 aa20.56■□□□□ 0.88
SMARCD3-203ENST00000392811 HIST2H2BFQ5QNW6 126 aaPredicted RBP20.56■□□□□ 0.88
SMARCD3-203ENST00000392811 HIST1H2BHQ93079 126 aa20.56■□□□□ 0.88
SMARCD3-203ENST00000392811 RPEQ96AT9 228 aa20.56■□□□□ 0.88
SMARCD3-203ENST00000392811 HIST1H2BNQ99877 126 aa20.56■□□□□ 0.88
SMARCD3-203ENST00000392811 HIST1H2BMQ99879 126 aa20.56■□□□□ 0.88
SMARCD3-203ENST00000392811 AMMECR1Q9Y4X0 333 aaPredicted RBP20.56■□□□□ 0.88
SMARCD3-203ENST00000392811 IGHV3-48P01763 117 aa20.56■□□□□ 0.88
SMARCD3-203ENST00000392811 NEU4Q8WWR8 484 aaPredicted RBP20.56■□□□□ 0.88
SMARCD3-203ENST00000392811 TMEM37Q8WXS4 190 aa20.56■□□□□ 0.88
SMARCD3-203ENST00000392811 ZNF503Q96F45 646 aa20.56■□□□□ 0.88
SMARCD3-203ENST00000392811 SIGLEC9Q9Y336 463 aa20.56■□□□□ 0.88
SMARCD3-203ENST00000392811 NDUFA6P56556 154 aa20.55■□□□□ 0.88
SMARCD3-203ENST00000392811 TNXAQ16473 311 aa20.55■□□□□ 0.88
SMARCD3-203ENST00000392811 NPIPB3Q92617 1050 aa20.55■□□□□ 0.88
SMARCD3-203ENST00000392811 CHD8Q9HCK8 2581 aa20.54■□□□□ 0.88
SMARCD3-203ENST00000392811 LY6LH3BQJ8 138 aa20.54■□□□□ 0.88
SMARCD3-203ENST00000392811 RPL27AP46776 148 aaKnown RBP20.54■□□□□ 0.88
SMARCD3-203ENST00000392811 TMEM167BQ9NRX6 74 aa20.54■□□□□ 0.88
SMARCD3-203ENST00000392811 MRPL36Q9P0J6 103 aaKnown RBP20.54■□□□□ 0.88
SMARCD3-203ENST00000392811 DCHS2Q6V1P9 2916 aa20.54■□□□□ 0.88
SMARCD3-203ENST00000392811 HRNRQ86YZ3 2850 aaPredicted RBP20.54■□□□□ 0.88
SMARCD3-203ENST00000392811 PLXNB1O43157 2135 aa20.54■□□□□ 0.88
SMARCD3-203ENST00000392811 PSMB11A5LHX3 300 aa20.54■□□□□ 0.88
SMARCD3-203ENST00000392811 S100A8P05109 93 aa20.54■□□□□ 0.88
SMARCD3-203ENST00000392811 FRZBQ92765 325 aa20.54■□□□□ 0.88
SMARCD3-203ENST00000392811 SFTPCP11686 197 aa20.53■□□□□ 0.88
SMARCD3-203ENST00000392811 PQLC2Q6ZP29 291 aa20.53■□□□□ 0.88
SMARCD3-203ENST00000392811 C11orf52Q96A22 123 aa20.53■□□□□ 0.88
SMARCD3-203ENST00000392811 PHOX2AO14813 284 aa20.53■□□□□ 0.88
SMARCD3-203ENST00000392811 OR7C2O60412 319 aa20.53■□□□□ 0.88
SMARCD3-203ENST00000392811 HOXA5P20719 270 aa20.53■□□□□ 0.88
SMARCD3-203ENST00000392811 TAS2R45P59539 299 aa20.53■□□□□ 0.88
SMARCD3-203ENST00000392811 HCP5Q6MZN7 132 aa20.53■□□□□ 0.88
SMARCD3-203ENST00000392811 UHRF2Q96PU4 802 aa20.53■□□□□ 0.88
SMARCD3-203ENST00000392811 SLC25A33Q9BSK2 321 aa20.53■□□□□ 0.88
SMARCD3-203ENST00000392811 ARL2-SNX15V9GYD0 113 aa20.53■□□□□ 0.88
SMARCD3-203ENST00000392811 IGKV1D-37A0A075B6S9 117 aa20.52■□□□□ 0.88
SMARCD3-203ENST00000392811 TRGC1P0CF51 173 aa20.52■□□□□ 0.88
SMARCD3-203ENST00000392811 CD99P14209 185 aa20.52■□□□□ 0.88
SMARCD3-203ENST00000392811 AREGP15514 252 aa20.52■□□□□ 0.88
SMARCD3-203ENST00000392811 COMPP49747 757 aaPredicted RBP20.52■□□□□ 0.88
SMARCD3-203ENST00000392811 ARF6P62330 175 aa20.52■□□□□ 0.88
SMARCD3-203ENST00000392811 CLEC12BQ2HXU8 276 aa20.52■□□□□ 0.88
SMARCD3-203ENST00000392811 LDLRAD2Q5SZI1 272 aa20.52■□□□□ 0.88
SMARCD3-203ENST00000392811 MRPL41Q8IXM3 137 aaKnown RBP20.52■□□□□ 0.88
SMARCD3-203ENST00000392811 THAP8Q8NA92 274 aa20.52■□□□□ 0.88
SMARCD3-203ENST00000392811 SRD5A3Q9H8P0 318 aa20.52■□□□□ 0.88
SMARCD3-203ENST00000392811 NCOR2Q9Y618 2525 aa20.52■□□□□ 0.88
SMARCD3-203ENST00000392811 MFAP2P55001 183 aa20.51■□□□□ 0.87
SMARCD3-203ENST00000392811 PVRIGQ6DKI7 326 aa20.51■□□□□ 0.87
SMARCD3-203ENST00000392811 DTX2Q86UW9 622 aa20.51■□□□□ 0.87
SMARCD3-203ENST00000392811 PPP1R27Q86WC6 154 aa20.51■□□□□ 0.87
SMARCD3-203ENST00000392811 MRPL32Q9BYC8 188 aaKnown RBP20.51■□□□□ 0.87
SMARCD3-203ENST00000392811 A0A1W2PPR1 153 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms