RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 OR10G9Q8NGN4 311 aa9.14□□□□□ -0.95
SMARCAL1-203ENST00000392128 OR10G7Q8NGN6 311 aa9.14□□□□□ -0.95
SMARCAL1-203ENST00000392128 SRSF8Q9BRL6 282 aaKnown RBP9.14□□□□□ -0.95
SMARCAL1-203ENST00000392128 CARHSP1Q9Y2V2 147 aaKnown RBP9.14□□□□□ -0.95
SMARCAL1-203ENST00000392128 CTXND1A0A1B0GTU2 59 aa9.14□□□□□ -0.95
SMARCAL1-203ENST00000392128 C9JQL5 133 aa9.14□□□□□ -0.95
SMARCAL1-203ENST00000392128 SCO1O75880 301 aa9.14□□□□□ -0.95
SMARCAL1-203ENST00000392128 SFTA3P0C7M3 94 aa9.14□□□□□ -0.95
SMARCAL1-203ENST00000392128 PAX6P26367 422 aa9.14□□□□□ -0.95
SMARCAL1-203ENST00000392128 RAB31Q13636 194 aa9.14□□□□□ -0.95
SMARCAL1-203ENST00000392128 NAV3Q8IVL0 2385 aa9.14□□□□□ -0.95
SMARCAL1-203ENST00000392128 CENPVL3A0A0U1RRI6 287 aa9.13□□□□□ -0.95
SMARCAL1-203ENST00000392128 MAP1LC3B2A6NCE7 125 aa9.13□□□□□ -0.95
SMARCAL1-203ENST00000392128 RBFOX3A6NFN3 312 aa9.13□□□□□ -0.95
SMARCAL1-203ENST00000392128 TEX22C9J3V5 150 aa9.13□□□□□ -0.95
SMARCAL1-203ENST00000392128 NPFFO15130 113 aa9.13□□□□□ -0.95
SMARCAL1-203ENST00000392128 SAA4P35542 130 aa9.13□□□□□ -0.95
SMARCAL1-203ENST00000392128 GNB1P62873 340 aa9.13□□□□□ -0.95
SMARCAL1-203ENST00000392128 GAMTQ14353 236 aa9.13□□□□□ -0.95
SMARCAL1-203ENST00000392128 HES1Q14469 280 aa9.13□□□□□ -0.95
SMARCAL1-203ENST00000392128 C21orf62-AS1Q17RA5 79 aa9.13□□□□□ -0.95
SMARCAL1-203ENST00000392128 CLEC12BQ2HXU8 276 aa9.13□□□□□ -0.95
SMARCAL1-203ENST00000392128 LCN15Q6UWW0 184 aa9.13□□□□□ -0.95
SMARCAL1-203ENST00000392128 SLC16A13Q7RTY0 426 aa9.13□□□□□ -0.95
SMARCAL1-203ENST00000392128 SRSF12Q8WXF0 261 aaKnown RBP9.13□□□□□ -0.95
SMARCAL1-203ENST00000392128 ACTR3CQ9C0K3 210 aaPredicted RBP9.13□□□□□ -0.95
SMARCAL1-203ENST00000392128 MAP1LC3BQ9GZQ8 125 aa9.13□□□□□ -0.95
SMARCAL1-203ENST00000392128 SLC39A9Q9NUM3 307 aa9.13□□□□□ -0.95
SMARCAL1-203ENST00000392128 PXMP4Q9Y6I8 212 aa9.13□□□□□ -0.95
SMARCAL1-203ENST00000392128 CSMD2Q7Z408 3487 aa9.13□□□□□ -0.95
SMARCAL1-203ENST00000392128 CRYBG3Q68DQ2 2970 aa9.13□□□□□ -0.95
SMARCAL1-203ENST00000392128 SPG11Q96JI7 2443 aa9.13□□□□□ -0.95
SMARCAL1-203ENST00000392128 SEC14L6B5MCN3 397 aa9.13□□□□□ -0.95
SMARCAL1-203ENST00000392128 FCN1O00602 326 aa9.13□□□□□ -0.95
SMARCAL1-203ENST00000392128 CYB5BO43169 146 aa9.13□□□□□ -0.95
SMARCAL1-203ENST00000392128 CD24P25063 80 aa9.13□□□□□ -0.95
SMARCAL1-203ENST00000392128 RPL29P47914 159 aaKnown RBP9.13□□□□□ -0.95
SMARCAL1-203ENST00000392128 PCP4P48539 62 aa9.13□□□□□ -0.95
SMARCAL1-203ENST00000392128 YIF1AO95070 293 aa9.12□□□□□ -0.95
SMARCAL1-203ENST00000392128 PLA2G2AP14555 144 aa9.12□□□□□ -0.95
SMARCAL1-203ENST00000392128 AREGP15514 252 aa9.12□□□□□ -0.95
SMARCAL1-203ENST00000392128 PMS2P11Q13670 270 aa9.12□□□□□ -0.95
SMARCAL1-203ENST00000392128 C5orf64Q2M2E5 130 aa9.12□□□□□ -0.95
SMARCAL1-203ENST00000392128 FBLN7Q53RD9 439 aa9.12□□□□□ -0.95
SMARCAL1-203ENST00000392128 ZNF506Q5JVG8 444 aa9.12□□□□□ -0.95
SMARCAL1-203ENST00000392128 SLC35E1Q96K37 410 aa9.12□□□□□ -0.95
SMARCAL1-203ENST00000392128 SLC25A22Q9H936 323 aa9.12□□□□□ -0.95
SMARCAL1-203ENST00000392128 CSMD1Q96PZ7 3565 aa9.12□□□□□ -0.95
SMARCAL1-203ENST00000392128 REG1AP05451 166 aa9.12□□□□□ -0.95
SMARCAL1-203ENST00000392128 MSMBP08118 114 aa9.12□□□□□ -0.95
SMARCAL1-203ENST00000392128 FAM106CPP0CH98 169 aa9.12□□□□□ -0.95
SMARCAL1-203ENST00000392128 COL8A1P27658 744 aa9.12□□□□□ -0.95
SMARCAL1-203ENST00000392128 BRS3P32247 399 aa9.12□□□□□ -0.95
SMARCAL1-203ENST00000392128 MIC13Q5XKP0 118 aa9.12□□□□□ -0.95
SMARCAL1-203ENST00000392128 SVBPQ8N300 66 aa9.12□□□□□ -0.95
SMARCAL1-203ENST00000392128 PIP4P2Q8N4L2 257 aa9.12□□□□□ -0.95
SMARCAL1-203ENST00000392128 OR1P1Q8NH06 330 aa9.12□□□□□ -0.95
SMARCAL1-203ENST00000392128 RARRES2Q99969 163 aa9.12□□□□□ -0.95
SMARCAL1-203ENST00000392128 IGKV1OR2-108A0A075B7D4 117 aa9.11□□□□□ -0.95
SMARCAL1-203ENST00000392128 CORTO00230 105 aa9.11□□□□□ -0.95
SMARCAL1-203ENST00000392128 TMEM11P17152 192 aa9.11□□□□□ -0.95
SMARCAL1-203ENST00000392128 CDC34P49427 236 aaPredicted RBP9.11□□□□□ -0.95
SMARCAL1-203ENST00000392128 PPT1P50897 306 aa9.11□□□□□ -0.95
SMARCAL1-203ENST00000392128 FGF8P55075 233 aaPredicted RBP9.11□□□□□ -0.95
SMARCAL1-203ENST00000392128 PRR20EP86478 221 aa9.11□□□□□ -0.95
SMARCAL1-203ENST00000392128 PRR20CP86479 221 aa9.11□□□□□ -0.95
SMARCAL1-203ENST00000392128 PRR20DP86480 221 aa9.11□□□□□ -0.95
SMARCAL1-203ENST00000392128 PRR20BP86481 221 aa9.11□□□□□ -0.95
SMARCAL1-203ENST00000392128 PRR20AP86496 221 aa9.11□□□□□ -0.95
SMARCAL1-203ENST00000392128 DEFA5Q01523 94 aa9.11□□□□□ -0.95
SMARCAL1-203ENST00000392128 MLANAQ16655 118 aa9.11□□□□□ -0.95
SMARCAL1-203ENST00000392128 KHDC3LQ587J8 217 aa9.11□□□□□ -0.95
SMARCAL1-203ENST00000392128 STPG3Q8N7X2 389 aa9.11□□□□□ -0.95
SMARCAL1-203ENST00000392128 RAB24Q969Q5 203 aa9.11□□□□□ -0.95
SMARCAL1-203ENST00000392128 SLC35B3Q9H1N7 401 aa9.11□□□□□ -0.95
SMARCAL1-203ENST00000392128 FNDC4Q9H6D8 234 aaPredicted RBP9.11□□□□□ -0.95
SMARCAL1-203ENST00000392128 BEX4Q9NWD9 120 aaPredicted RBP9.11□□□□□ -0.95
SMARCAL1-203ENST00000392128 SLC45A2Q9UMX9 530 aa9.11□□□□□ -0.95
SMARCAL1-203ENST00000392128 F11RQ9Y624 299 aaKnown RBP9.11□□□□□ -0.95
SMARCAL1-203ENST00000392128 IGHV1-69DA0A0B4J2H0 117 aa9.11□□□□□ -0.95
SMARCAL1-203ENST00000392128 B4DSR2 109 aa9.11□□□□□ -0.95
SMARCAL1-203ENST00000392128 CNIH1O95406 144 aa9.11□□□□□ -0.95
SMARCAL1-203ENST00000392128 IGHV1-69P01742 117 aa9.11□□□□□ -0.95
SMARCAL1-203ENST00000392128 ICAM4Q14773 271 aa9.11□□□□□ -0.95
SMARCAL1-203ENST00000392128 HAGHQ16775 308 aa9.11□□□□□ -0.95
SMARCAL1-203ENST00000392128 ETFRF1Q6IPR1 90 aa9.11□□□□□ -0.95
SMARCAL1-203ENST00000392128 SSMEM1Q8WWF3 244 aa9.11□□□□□ -0.95
SMARCAL1-203ENST00000392128 FBN2P35556 2912 aa9.1□□□□□ -0.95
SMARCAL1-203ENST00000392128 A0A096LNT2 108 aa9.1□□□□□ -0.95
SMARCAL1-203ENST00000392128 LOC102723971A0A1B0GUV8 181 aa9.1□□□□□ -0.95
SMARCAL1-203ENST00000392128 J3QKU1 62 aa9.1□□□□□ -0.95
SMARCAL1-203ENST00000392128 HSPB1P04792 205 aaKnown RBP9.1□□□□□ -0.95
SMARCAL1-203ENST00000392128 CRYGCP07315 174 aa9.1□□□□□ -0.95
SMARCAL1-203ENST00000392128 MEOX2P50222 304 aa9.1□□□□□ -0.95
SMARCAL1-203ENST00000392128 MFAP2P55001 183 aa9.1□□□□□ -0.95
SMARCAL1-203ENST00000392128 KRTAP10-9P60411 292 aa9.1□□□□□ -0.95
SMARCAL1-203ENST00000392128 GUCA2BQ16661 112 aa9.1□□□□□ -0.95
SMARCAL1-203ENST00000392128 TMEM249Q2WGJ8 235 aa9.1□□□□□ -0.95
SMARCAL1-203ENST00000392128 GCSAMLQ5JQS6 135 aa9.1□□□□□ -0.95
SMARCAL1-203ENST00000392128 OR2T6Q8NHC8 308 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms