RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 C3orf56Q8N813 242 aa-0.17□□□□□ -2.44
SNORD28B-201ENST00000390993 OR5A1Q8NGJ0 315 aa-0.17□□□□□ -2.44
SNORD28B-201ENST00000390993 PFN4Q8NHR9 129 aa-0.17□□□□□ -2.44
SNORD28B-201ENST00000390993 DNAJC9Q8WXX5 260 aa-0.17□□□□□ -2.44
SNORD28B-201ENST00000390993 PSMF1Q92530 271 aa-0.17□□□□□ -2.44
SNORD28B-201ENST00000390993 C6orf62Q9GZU0 229 aaPredicted RBP-0.17□□□□□ -2.44
SNORD28B-201ENST00000390993 C14orf105Q9NVL8 296 aa-0.17□□□□□ -2.44
SNORD28B-201ENST00000390993 RABL2AQ9UBK7 228 aaPredicted RBP-0.17□□□□□ -2.44
SNORD28B-201ENST00000390993 HS3ST2Q9Y278 367 aa-0.17□□□□□ -2.44
SNORD28B-201ENST00000390993 POLR1DQ9Y2S0 133 aa-0.17□□□□□ -2.44
SNORD28B-201ENST00000390993 COQ4Q9Y3A0 265 aa-0.17□□□□□ -2.44
SNORD28B-201ENST00000390993 MYO3BQ8WXR4 1341 aa-0.17□□□□□ -2.44
SNORD28B-201ENST00000390993 TRBV6-4A0A1B0GX49 114 aa-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 FTCDNL1E5RQL4 147 aa-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 K7EIL1 84 aa-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 SSNA1O43805 119 aa-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 ADAP1O75689 374 aa-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 LYZL6O75951 148 aa-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 FAM228BP0C875 321 aa-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 UCHL3P15374 230 aa-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 HIST1H2BOP23527 126 aa-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 HIST1H2BBP33778 126 aa-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 HIST1H2BDP58876 126 aa-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 HIST1H2BCP62807 126 aa-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 TNFAIP6P98066 277 aaPredicted RBP-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 XIAPP98170 497 aa-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 ANGPT1Q15389 498 aa-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 HIST2H2BEQ16778 126 aa-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 C4orf26Q17RF5 130 aa-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 LINC01554Q52M75 96 aa-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 CDKL4Q5MAI5 379 aa-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 HIST2H2BFQ5QNW6 126 aaPredicted RBP-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 KRTAP26-1Q6PEX3 210 aa-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 HAGHLQ6PII5 290 aaPredicted RBP-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 C2orf82Q6UX34 121 aa-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 SYCE1Q8N0S2 351 aa-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 EEF1AKMT1Q8WVE0 214 aa-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 HIST1H2BHQ93079 126 aa-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 ZC2HC1AQ96GY0 325 aa-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 CNBD2Q96M20 576 aa-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 HIST1H2BNQ99877 126 aa-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 HIST1H2BMQ99879 126 aa-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 FAM103A1Q9BTL3 118 aaKnown RBP-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 DERL1Q9BUN8 251 aa-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 DERL2Q9GZP9 239 aa-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 MS4A6AQ9H2W1 248 aa-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 SLC39A9Q9NUM3 307 aa-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 RNF11Q9Y3C5 154 aa-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 TPRP12270 2363 aaKnown RBP-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 SCN3AQ9NY46 2000 aa-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 SSPOA2VEC9 5147 aa-0.18□□□□□ -2.44
SNORD28B-201ENST00000390993 CEP192Q8TEP8 1941 aa-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 KIF15Q9NS87 1388 aa-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 STRCQ7RTU9 1775 aa-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 ZFYVE26Q68DK2 2539 aa-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 MUC4Q99102 2169 aa-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 KDM6AO15550 1401 aaPredicted RBP-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 CACNA1CQ13936 2221 aa-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 IGHV1-58A0A0C4DH39 117 aa-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 CCL16O15467 120 aa-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 NUPR1O60356 82 aa-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 HPGDSO60760 199 aa-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 KLF7O75840 302 aaPredicted RBP-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 IFNA10P01566 189 aa-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 CD3DP04234 171 aa-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 S100A9P06702 114 aaKnown RBP-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 IVLP07476 585 aa-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 FOXA3P55318 350 aaPredicted RBP-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 C12orf74Q32Q52 190 aa-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 SPRNQ5BIV9 151 aa-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 COQ5Q5HYK3 327 aa-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 C1orf194Q5T5A4 169 aa-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 SDHAF4Q5VUM1 108 aa-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 TRAPPC6BQ86SZ2 158 aa-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 CLVS1Q8IUQ0 354 aaPredicted RBP-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 Q8N402 240 aa-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 LINC00301Q8NCQ3 95 aa-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 ST6GALNAC3Q8NDV1 305 aa-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 PXT1Q8NFP0 134 aa-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 OR10J5Q8NHC4 309 aa-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 TMEM254Q8TBM7 123 aa-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 ZNF431Q8TF32 576 aaPredicted RBP-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 DIRAS2Q96HU8 199 aa-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 SIKE1Q9BRV8 207 aa-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 DCUN1D5Q9BTE7 237 aa-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 C14orf132Q9NPU4 83 aa-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 ORMDL1Q9P0S3 153 aa-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 POFUT2Q9Y2G5 429 aa-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 COL4A5P29400 1685 aa-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 BDP1A6H8Y1 2624 aa-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 PIK3R4Q99570 1358 aa-0.19□□□□□ -2.44
SNORD28B-201ENST00000390993 A0A0J9YY10 115 aa-0.2□□□□□ -2.44
SNORD28B-201ENST00000390993 LOC100506127A0A0U1RQW1 187 aa-0.2□□□□□ -2.44
SNORD28B-201ENST00000390993 A0A1B0GX78 115 aa-0.2□□□□□ -2.44
SNORD28B-201ENST00000390993 TMEM213A2RRL7 107 aa-0.2□□□□□ -2.44
SNORD28B-201ENST00000390993 C7orf71A4D174 169 aa-0.2□□□□□ -2.44
SNORD28B-201ENST00000390993 SMIM9A6NGZ8 99 aa-0.2□□□□□ -2.44
SNORD28B-201ENST00000390993 C5orf67F2Z3F1 127 aa-0.2□□□□□ -2.44
SNORD28B-201ENST00000390993 H3BRM9 83 aa-0.2□□□□□ -2.44
SNORD28B-201ENST00000390993 ZNF682O95780 498 aa-0.2□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms