RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 BAALC-AS2P0C853 105 aa0.38□□□□□ -2.35
SNORA40.4-201ENST00000390971 TMEM147Q9BVK8 224 aa0.38□□□□□ -2.35
SNORA40.4-201ENST00000390971 ACER3Q9NUN7 267 aa0.38□□□□□ -2.35
SNORA40.4-201ENST00000390971 PEAK1Q9H792 1746 aa0.38□□□□□ -2.35
SNORA40.4-201ENST00000390971 MUC5BQ9HC84 5762 aaPredicted RBP0.37□□□□□ -2.35
SNORA40.4-201ENST00000390971 M0QZ92 97 aa0.37□□□□□ -2.35
SNORA40.4-201ENST00000390971 KCNK1O00180 336 aa0.37□□□□□ -2.35
SNORA40.4-201ENST00000390971 SSR2P43308 183 aa0.37□□□□□ -2.35
SNORA40.4-201ENST00000390971 SRSF6Q13247 344 aaKnown RBP0.37□□□□□ -2.35
SNORA40.4-201ENST00000390971 KHDC3LQ587J8 217 aa0.37□□□□□ -2.35
SNORA40.4-201ENST00000390971 MIR17HGQ75NE6 70 aa0.37□□□□□ -2.35
SNORA40.4-201ENST00000390971 BPIFA4PQ86YQ2 179 aa0.37□□□□□ -2.35
SNORA40.4-201ENST00000390971 BORCS5Q969J3 196 aa0.37□□□□□ -2.35
SNORA40.4-201ENST00000390971 TMEM70Q9BUB7 260 aa0.37□□□□□ -2.35
SNORA40.4-201ENST00000390971 FGFR1OP2Q9NVK5 253 aa0.37□□□□□ -2.35
SNORA40.4-201ENST00000390971 UBL3O95164 117 aa0.36□□□□□ -2.35
SNORA40.4-201ENST00000390971 OCM2P0CE71 109 aa0.36□□□□□ -2.35
SNORA40.4-201ENST00000390971 RHEBQ15382 184 aa0.36□□□□□ -2.35
SNORA40.4-201ENST00000390971 OGFRL1Q5TC84 451 aaPredicted RBP0.36□□□□□ -2.35
SNORA40.4-201ENST00000390971 CLVS1Q8IUQ0 354 aaPredicted RBP0.36□□□□□ -2.35
SNORA40.4-201ENST00000390971 LRRC25Q8N386 305 aaPredicted RBP0.36□□□□□ -2.35
SNORA40.4-201ENST00000390971 OR5A1Q8NGJ0 315 aa0.36□□□□□ -2.35
SNORA40.4-201ENST00000390971 OR13C4Q8NGS5 318 aa0.36□□□□□ -2.35
SNORA40.4-201ENST00000390971 SFT2D1Q8WV19 159 aa0.36□□□□□ -2.35
SNORA40.4-201ENST00000390971 C10orf95Q9H7T3 257 aa0.36□□□□□ -2.35
SNORA40.4-201ENST00000390971 RASL12Q9NYN1 266 aa0.36□□□□□ -2.35
SNORA40.4-201ENST00000390971 TAS2R4Q9NYW5 299 aa0.36□□□□□ -2.35
SNORA40.4-201ENST00000390971 APCP25054 2843 aa0.36□□□□□ -2.35
SNORA40.4-201ENST00000390971 PIK3R4Q99570 1358 aa0.35□□□□□ -2.35
SNORA40.4-201ENST00000390971 NCR3O14931 201 aa0.35□□□□□ -2.35
SNORA40.4-201ENST00000390971 RAB5BP61020 215 aa0.35□□□□□ -2.35
SNORA40.4-201ENST00000390971 A0A0A6YYH2 397 aa0.34□□□□□ -2.36
SNORA40.4-201ENST00000390971 A6NJ64 397 aa0.34□□□□□ -2.36
SNORA40.4-201ENST00000390971 RPS12P25398 132 aaKnown RBP0.34□□□□□ -2.36
SNORA40.4-201ENST00000390971 TMEM156Q8N614 296 aa0.34□□□□□ -2.36
SNORA40.4-201ENST00000390971 RAB8BQ92930 207 aa0.34□□□□□ -2.36
SNORA40.4-201ENST00000390971 OPTNQ96CV9 577 aa0.34□□□□□ -2.36
SNORA40.4-201ENST00000390971 EML6Q6ZMW3 1958 aa0.34□□□□□ -2.36
SNORA40.4-201ENST00000390971 TRAV12-1A0A0B4J245 112 aa0.33□□□□□ -2.36
SNORA40.4-201ENST00000390971 OR2B3O76000 313 aa0.33□□□□□ -2.36
SNORA40.4-201ENST00000390971 CNBPP62633 177 aaKnown RBP0.33□□□□□ -2.36
SNORA40.4-201ENST00000390971 HBA1P69905 142 aa0.33□□□□□ -2.36
SNORA40.4-201ENST00000390971 MPV17LQ2QL34 196 aa0.33□□□□□ -2.36
SNORA40.4-201ENST00000390971 PDPK2PQ6A1A2 396 aa0.33□□□□□ -2.36
SNORA40.4-201ENST00000390971 SOSTDC1Q6X4U4 206 aa0.33□□□□□ -2.36
SNORA40.4-201ENST00000390971 IMP4Q96G21 291 aaKnown RBP0.33□□□□□ -2.36
SNORA40.4-201ENST00000390971 OR51I1Q9H343 314 aa0.33□□□□□ -2.36
SNORA40.4-201ENST00000390971 TNRC6AQ8NDV7 1962 aaKnown RBP0.32□□□□□ -2.36
SNORA40.4-201ENST00000390971 LRRN3E7EW58 273 aa0.32□□□□□ -2.36
SNORA40.4-201ENST00000390971 H0Y980 276 aa0.32□□□□□ -2.36
SNORA40.4-201ENST00000390971 SLC16A4O15374 487 aa0.32□□□□□ -2.36
SNORA40.4-201ENST00000390971 TCL1BO95988 128 aa0.32□□□□□ -2.36
SNORA40.4-201ENST00000390971 PRH1P02810 166 aa0.32□□□□□ -2.36
SNORA40.4-201ENST00000390971 ZNF25P17030 456 aaPredicted RBP0.32□□□□□ -2.36
SNORA40.4-201ENST00000390971 RNASE10Q5GAN6 216 aaKnown RBP0.32□□□□□ -2.36
SNORA40.4-201ENST00000390971 SFXN4Q6P4A7 337 aa0.32□□□□□ -2.36
SNORA40.4-201ENST00000390971 TERB2Q8NHR7 220 aa0.32□□□□□ -2.36
SNORA40.4-201ENST00000390971 DNAJC9Q8WXX5 260 aa0.32□□□□□ -2.36
SNORA40.4-201ENST00000390971 KLK6Q92876 244 aa0.32□□□□□ -2.36
SNORA40.4-201ENST00000390971 TP73-AS1Q9UF72 201 aa0.32□□□□□ -2.36
SNORA40.4-201ENST00000390971 EVC2Q86UK5 1308 aa0.32□□□□□ -2.36
SNORA40.4-201ENST00000390971 MTUS2Q5JR59 1369 aa0.32□□□□□ -2.36
SNORA40.4-201ENST00000390971 LYZL6O75951 148 aa0.31□□□□□ -2.36
SNORA40.4-201ENST00000390971 C1orf137Q5JT78 98 aa0.31□□□□□ -2.36
SNORA40.4-201ENST00000390971 LPCAT4Q643R3 524 aa0.31□□□□□ -2.36
SNORA40.4-201ENST00000390971 SIGLECL1Q8N7X8 197 aa0.31□□□□□ -2.36
SNORA40.4-201ENST00000390971 PATE1Q8WXA2 126 aa0.31□□□□□ -2.36
SNORA40.4-201ENST00000390971 SMR3AQ99954 134 aa0.31□□□□□ -2.36
SNORA40.4-201ENST00000390971 DRC3Q9H069 523 aa0.31□□□□□ -2.36
SNORA40.4-201ENST00000390971 CDC42SE1Q9NRR8 79 aa0.31□□□□□ -2.36
SNORA40.4-201ENST00000390971 ZFC3H1O60293 1989 aaKnown RBP0.31□□□□□ -2.36
SNORA40.4-201ENST00000390971 NAV2Q8IVL1 2488 aa0.31□□□□□ -2.36
SNORA40.4-201ENST00000390971 ZNF462Q96JM2 2506 aa0.31□□□□□ -2.36
SNORA40.4-201ENST00000390971 E9PCH4 1651 aa0.3□□□□□ -2.36
SNORA40.4-201ENST00000390971 NAV3Q8IVL0 2385 aa0.3□□□□□ -2.36
SNORA40.4-201ENST00000390971 SULT1B1O43704 296 aa0.3□□□□□ -2.36
SNORA40.4-201ENST00000390971 PROSCO94903 275 aa0.3□□□□□ -2.36
SNORA40.4-201ENST00000390971 PMAIP1Q13794 54 aa0.3□□□□□ -2.36
SNORA40.4-201ENST00000390971 FAM151BQ6UXP7 276 aa0.3□□□□□ -2.36
SNORA40.4-201ENST00000390971 M0QX08 132 aa0.29□□□□□ -2.36
SNORA40.4-201ENST00000390971 IFNA10P01566 189 aa0.29□□□□□ -2.36
SNORA40.4-201ENST00000390971 OR5G3P0C626 314 aa0.29□□□□□ -2.36
SNORA40.4-201ENST00000390971 MGST1P10620 155 aaKnown RBP0.29□□□□□ -2.36
SNORA40.4-201ENST00000390971 HIST3H2BBQ8N257 126 aa0.29□□□□□ -2.36
SNORA40.4-201ENST00000390971 C4orf3Q8WVX3 66 aa0.29□□□□□ -2.36
SNORA40.4-201ENST00000390971 XPNPEP1Q9NQW7 623 aa0.29□□□□□ -2.36
SNORA40.4-201ENST00000390971 SLC39A9Q9NUM3 307 aa0.29□□□□□ -2.36
SNORA40.4-201ENST00000390971 FBXL12Q9NXK8 326 aa0.29□□□□□ -2.36
SNORA40.4-201ENST00000390971 USE1Q9NZ43 259 aa0.29□□□□□ -2.36
SNORA40.4-201ENST00000390971 LSM5Q9Y4Y9 91 aaKnown RBP0.29□□□□□ -2.36
SNORA40.4-201ENST00000390971 C9orf84Q5VXU9 1444 aa0.29□□□□□ -2.36
SNORA40.4-201ENST00000390971 COL1A1P02452 1464 aaPredicted RBP0.29□□□□□ -2.36
SNORA40.4-201ENST00000390971 MCM3APO60318 1980 aa0.28□□□□□ -2.36
SNORA40.4-201ENST00000390971 PQLC2LA1A4F0 135 aa0.28□□□□□ -2.36
SNORA40.4-201ENST00000390971 ZNF736B4DX44 427 aaPredicted RBP0.28□□□□□ -2.36
SNORA40.4-201ENST00000390971 AP2S1P53680 142 aaPredicted RBP0.28□□□□□ -2.36
SNORA40.4-201ENST00000390971 TMED1Q13445 227 aa0.28□□□□□ -2.36
SNORA40.4-201ENST00000390971 LPCAT3Q6P1A2 487 aa0.28□□□□□ -2.36
SNORA40.4-201ENST00000390971 CD200R1LQ6Q8B3 271 aa0.28□□□□□ -2.36
SNORA40.4-201ENST00000390971 ALKAL1Q6UXT8 129 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms