RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 C1orf162Q8NEQ5 155 aaPredicted RBP14.52□□□□□ -0.09
SQSTM1-202ENST00000389805 OR4F17Q8NGA8 305 aa14.52□□□□□ -0.09
SQSTM1-202ENST00000389805 PCNX1Q96RV3 2341 aa14.51□□□□□ -0.09
SQSTM1-202ENST00000389805 SAA2-SAA4A0A096LPE2 208 aa14.51□□□□□ -0.09
SQSTM1-202ENST00000389805 AHRRA9YTQ3 701 aa14.51□□□□□ -0.09
SQSTM1-202ENST00000389805 APCSP02743 223 aa14.51□□□□□ -0.09
SQSTM1-202ENST00000389805 MPV17L2Q567V2 206 aa14.51□□□□□ -0.09
SQSTM1-202ENST00000389805 FAM201AQ5SY85 155 aa14.51□□□□□ -0.09
SQSTM1-202ENST00000389805 TRGV10A0A0A0MS01 117 aa14.51□□□□□ -0.09
SQSTM1-202ENST00000389805 FCGR3BO75015 233 aa14.51□□□□□ -0.09
SQSTM1-202ENST00000389805 HSBP1O75506 76 aa14.51□□□□□ -0.09
SQSTM1-202ENST00000389805 GPR6P46095 362 aaPredicted RBP14.51□□□□□ -0.09
SQSTM1-202ENST00000389805 MIR17HGQ75NE6 70 aa14.51□□□□□ -0.09
SQSTM1-202ENST00000389805 NEUROG1Q92886 237 aa14.51□□□□□ -0.09
SQSTM1-202ENST00000389805 SLC25A15Q9Y619 301 aa14.51□□□□□ -0.09
SQSTM1-202ENST00000389805 TRAV3A0A0B4J244 114 aa14.5□□□□□ -0.09
SQSTM1-202ENST00000389805 M0R1B8 84 aa14.5□□□□□ -0.09
SQSTM1-202ENST00000389805 MT-ND6P03923 174 aa14.5□□□□□ -0.09
SQSTM1-202ENST00000389805 USF1P22415 310 aaPredicted RBP14.5□□□□□ -0.09
SQSTM1-202ENST00000389805 PRDX2P32119 198 aa14.5□□□□□ -0.09
SQSTM1-202ENST00000389805 EIF4EBP1Q13541 118 aaPredicted RBP14.5□□□□□ -0.09
SQSTM1-202ENST00000389805 PSG5Q15238 335 aa14.5□□□□□ -0.09
SQSTM1-202ENST00000389805 PRAMEF5Q5TYX0 476 aa14.5□□□□□ -0.09
SQSTM1-202ENST00000389805 ZNF474Q6S9Z5 364 aaPredicted RBP14.5□□□□□ -0.09
SQSTM1-202ENST00000389805 STPG3Q8N7X2 389 aa14.5□□□□□ -0.09
SQSTM1-202ENST00000389805 ZC2HC1AQ96GY0 325 aa14.5□□□□□ -0.09
SQSTM1-202ENST00000389805 SELENOKQ9Y6D0 94 aa14.5□□□□□ -0.09
SQSTM1-202ENST00000389805 ANKRD11Q6UB99 2663 aaPredicted RBP14.5□□□□□ -0.09
SQSTM1-202ENST00000389805 IGHV1-69-2A0A0G2JMI3 117 aa14.5□□□□□ -0.09
SQSTM1-202ENST00000389805 M0R2Z0 102 aa14.5□□□□□ -0.09
SQSTM1-202ENST00000389805 SMIM21Q3B7S5 101 aa14.5□□□□□ -0.09
SQSTM1-202ENST00000389805 MORN2Q502X0 79 aa14.5□□□□□ -0.09
SQSTM1-202ENST00000389805 UTF1Q5T230 341 aa14.5□□□□□ -0.09
SQSTM1-202ENST00000389805 SPATA12Q7Z6I5 190 aa14.5□□□□□ -0.09
SQSTM1-202ENST00000389805 ZNRF1Q8ND25 227 aa14.5□□□□□ -0.09
SQSTM1-202ENST00000389805 ZNF596Q8TC21 504 aa14.5□□□□□ -0.09
SQSTM1-202ENST00000389805 C18orf32Q8TCD1 76 aa14.5□□□□□ -0.09
SQSTM1-202ENST00000389805 FAM168AQ92567 244 aa14.5□□□□□ -0.09
SQSTM1-202ENST00000389805 CHODLQ9H9P2 273 aa14.5□□□□□ -0.09
SQSTM1-202ENST00000389805 ACACAQ13085 2346 aa14.5□□□□□ -0.09
SQSTM1-202ENST00000389805 TRAV9-2A0A087WT02 112 aa14.49□□□□□ -0.09
SQSTM1-202ENST00000389805 AMY1AP04745 511 aa14.49□□□□□ -0.09
SQSTM1-202ENST00000389805 RNASEKQ6P5S7 137 aaKnown RBP14.49□□□□□ -0.09
SQSTM1-202ENST00000389805 C19orf35Q6ZS72 473 aa14.49□□□□□ -0.09
SQSTM1-202ENST00000389805 C22orf34Q6ZV56 151 aa14.49□□□□□ -0.09
SQSTM1-202ENST00000389805 ZADH2Q8N4Q0 377 aa14.49□□□□□ -0.09
SQSTM1-202ENST00000389805 FAM122AQ96E09 287 aa14.49□□□□□ -0.09
SQSTM1-202ENST00000389805 C1orf159Q96HA4 380 aa14.49□□□□□ -0.09
SQSTM1-202ENST00000389805 CLEC5AQ9NY25 188 aa14.49□□□□□ -0.09
SQSTM1-202ENST00000389805 WASHC3Q9Y3C0 194 aa14.49□□□□□ -0.09
SQSTM1-202ENST00000389805 TET2Q6N021 2002 aaPredicted RBP14.49□□□□□ -0.09
SQSTM1-202ENST00000389805 IGKV1D-17A0A075B6S4 117 aa14.49□□□□□ -0.09
SQSTM1-202ENST00000389805 C9JCJ5 164 aa14.49□□□□□ -0.09
SQSTM1-202ENST00000389805 TM4SF5O14894 197 aa14.49□□□□□ -0.09
SQSTM1-202ENST00000389805 BPIFB3P59826 476 aa14.49□□□□□ -0.09
SQSTM1-202ENST00000389805 PMCHL1Q16048 86 aa14.49□□□□□ -0.09
SQSTM1-202ENST00000389805 PTPRBP23467 1997 aa14.49□□□□□ -0.09
SQSTM1-202ENST00000389805 OR2T8A6NH00 312 aa14.49□□□□□ -0.09
SQSTM1-202ENST00000389805 PROP1O75360 226 aa14.49□□□□□ -0.09
SQSTM1-202ENST00000389805 OR10J4P0C629 311 aa14.49□□□□□ -0.09
SQSTM1-202ENST00000389805 MBNL2Q5VZF2 373 aaKnown RBP14.49□□□□□ -0.09
SQSTM1-202ENST00000389805 SLC24A4Q8NFF2 622 aa14.49□□□□□ -0.09
SQSTM1-202ENST00000389805 OR4A16Q8NH70 328 aa14.49□□□□□ -0.09
SQSTM1-202ENST00000389805 PRR7Q8TB68 274 aa14.49□□□□□ -0.09
SQSTM1-202ENST00000389805 CST9LQ9H4G1 147 aa14.49□□□□□ -0.09
SQSTM1-202ENST00000389805 TECRQ9NZ01 308 aaKnown RBP14.49□□□□□ -0.09
SQSTM1-202ENST00000389805 RHOBP62745 196 aa14.48□□□□□ -0.09
SQSTM1-202ENST00000389805 RPL19P84098 196 aaKnown RBP14.48□□□□□ -0.09
SQSTM1-202ENST00000389805 TIGITQ495A1 244 aa14.48□□□□□ -0.09
SQSTM1-202ENST00000389805 IBA57Q5T440 356 aaKnown RBP14.48□□□□□ -0.09
SQSTM1-202ENST00000389805 OR4A47Q6IF82 309 aa14.48□□□□□ -0.09
SQSTM1-202ENST00000389805 FAM216AQ8WUB2 273 aa14.48□□□□□ -0.09
SQSTM1-202ENST00000389805 SSBP4Q9BWG4 385 aaPredicted RBP14.48□□□□□ -0.09
SQSTM1-202ENST00000389805 FAM215AQ9Y5M1 114 aa14.48□□□□□ -0.09
SQSTM1-202ENST00000389805 FAM181BA6NEQ2 426 aa14.48□□□□□ -0.09
SQSTM1-202ENST00000389805 SH2D7A6NKC9 451 aaPredicted RBP14.48□□□□□ -0.09
SQSTM1-202ENST00000389805 ZNF891A8MT65 544 aaPredicted RBP14.48□□□□□ -0.09
SQSTM1-202ENST00000389805 SPRY3O43610 288 aa14.48□□□□□ -0.09
SQSTM1-202ENST00000389805 MPDU1O75352 247 aa14.48□□□□□ -0.09
SQSTM1-202ENST00000389805 RPL8P62917 257 aaKnown RBP14.48□□□□□ -0.09
SQSTM1-202ENST00000389805 MUC15Q8N387 334 aa14.48□□□□□ -0.09
SQSTM1-202ENST00000389805 ZBTB34Q8NCN2 500 aa14.48□□□□□ -0.09
SQSTM1-202ENST00000389805 OR2D3Q8NGH3 330 aa14.48□□□□□ -0.09
SQSTM1-202ENST00000389805 A0A1W2PN81 502 aa14.47□□□□□ -0.09
SQSTM1-202ENST00000389805 C15orf65H3BRN8 121 aa14.47□□□□□ -0.09
SQSTM1-202ENST00000389805 HLA-DQA1P01909 254 aa14.47□□□□□ -0.09
SQSTM1-202ENST00000389805 C11orf52Q96A22 123 aa14.47□□□□□ -0.09
SQSTM1-202ENST00000389805 OR2V2Q96R30 315 aa14.47□□□□□ -0.09
SQSTM1-202ENST00000389805 GSX1Q9H4S2 264 aaPredicted RBP14.47□□□□□ -0.09
SQSTM1-202ENST00000389805 ZNF331Q9NQX6 463 aaPredicted RBP14.47□□□□□ -0.09
SQSTM1-202ENST00000389805 TRAV30A0A087WSZ9 112 aa14.47□□□□□ -0.09
SQSTM1-202ENST00000389805 GATA2P23769 480 aaPredicted RBP14.47□□□□□ -0.09
SQSTM1-202ENST00000389805 MOGAT3Q86VF5 341 aa14.47□□□□□ -0.09
SQSTM1-202ENST00000389805 GCSAMQ8N6F7 178 aa14.47□□□□□ -0.09
SQSTM1-202ENST00000389805 HSD17B10Q99714 261 aaKnown RBP14.47□□□□□ -0.09
SQSTM1-202ENST00000389805 CEACAM4O75871 244 aa14.46□□□□□ -0.09
SQSTM1-202ENST00000389805 NUDT3O95989 172 aa14.46□□□□□ -0.09
SQSTM1-202ENST00000389805 CA7P43166 264 aa14.46□□□□□ -0.09
SQSTM1-202ENST00000389805 SELENOVP59797 346 aa14.46□□□□□ -0.09
SQSTM1-202ENST00000389805 OCIAD2Q56VL3 154 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms