RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 GNB1P62873 340 aa20.16■□□□□ 0.82
SHOX2-201ENST00000389589 MMDQ15546 238 aa20.16■□□□□ 0.82
SHOX2-201ENST00000389589 NPBQ8NG41 125 aa20.16■□□□□ 0.82
SHOX2-201ENST00000389589 SRSF8Q9BRL6 282 aaKnown RBP20.16■□□□□ 0.82
SHOX2-201ENST00000389589 TBL2Q9Y4P3 447 aaKnown RBP20.16■□□□□ 0.82
SHOX2-201ENST00000389589 A0A1W2PRD5 423 aa20.15■□□□□ 0.82
SHOX2-201ENST00000389589 A0A1W2PRF3 423 aa20.15■□□□□ 0.82
SHOX2-201ENST00000389589 A0A1W2PRM7 423 aa20.15■□□□□ 0.82
SHOX2-201ENST00000389589 OR10J1P30954 320 aa20.15■□□□□ 0.82
SHOX2-201ENST00000389589 FAM90A2PQ658T7 463 aa20.15■□□□□ 0.82
SHOX2-201ENST00000389589 ETFRF1Q6IPR1 90 aa20.15■□□□□ 0.82
SHOX2-201ENST00000389589 C20orf24Q9BUV8 137 aa20.15■□□□□ 0.82
SHOX2-201ENST00000389589 POLR3KQ9Y2Y1 108 aaPredicted RBP20.15■□□□□ 0.82
SHOX2-201ENST00000389589 SPTAN1Q13813 2472 aaKnown RBP20.15■□□□□ 0.82
SHOX2-201ENST00000389589 TACC2O95359 2948 aa20.15■□□□□ 0.82
SHOX2-201ENST00000389589 NDUFS8O00217 210 aa20.15■□□□□ 0.82
SHOX2-201ENST00000389589 CXorf1O96002 111 aa20.15■□□□□ 0.82
SHOX2-201ENST00000389589 SSX2Q16385 188 aa20.15■□□□□ 0.82
SHOX2-201ENST00000389589 OR2T10Q8NGZ9 312 aa20.15■□□□□ 0.82
SHOX2-201ENST00000389589 FAM168AQ92567 244 aa20.15■□□□□ 0.82
SHOX2-201ENST00000389589 TVP23CQ96ET8 276 aa20.15■□□□□ 0.82
SHOX2-201ENST00000389589 FLNCQ14315 2725 aa20.14■□□□□ 0.81
SHOX2-201ENST00000389589 NDUFA3O95167 84 aa20.14■□□□□ 0.81
SHOX2-201ENST00000389589 REG1AP05451 166 aa20.14■□□□□ 0.81
SHOX2-201ENST00000389589 UBE2E1P51965 193 aa20.14■□□□□ 0.81
SHOX2-201ENST00000389589 CD81P60033 236 aa20.14■□□□□ 0.81
SHOX2-201ENST00000389589 NANPQ8TBE9 248 aa20.14■□□□□ 0.81
SHOX2-201ENST00000389589 EAF1Q96JC9 268 aaPredicted RBP20.14■□□□□ 0.81
SHOX2-201ENST00000389589 C19orf24Q9BVV8 132 aa20.14■□□□□ 0.81
SHOX2-201ENST00000389589 USP9XQ93008 2570 aaPredicted RBP20.14■□□□□ 0.81
SHOX2-201ENST00000389589 TMEM250H0YL14 139 aa20.14■□□□□ 0.81
SHOX2-201ENST00000389589 CORTO00230 105 aa20.14■□□□□ 0.81
SHOX2-201ENST00000389589 OR1P1Q8NH06 330 aa20.14■□□□□ 0.81
SHOX2-201ENST00000389589 OR2T6Q8NHC8 308 aa20.14■□□□□ 0.81
SHOX2-201ENST00000389589 ABHD5Q8WTS1 349 aa20.14■□□□□ 0.81
SHOX2-201ENST00000389589 SRSF12Q8WXF0 261 aaKnown RBP20.14■□□□□ 0.81
SHOX2-201ENST00000389589 ACY3Q96HD9 319 aa20.14■□□□□ 0.81
SHOX2-201ENST00000389589 FNDC4Q9H6D8 234 aaPredicted RBP20.14■□□□□ 0.81
SHOX2-201ENST00000389589 TEX22C9J3V5 150 aa20.13■□□□□ 0.81
SHOX2-201ENST00000389589 MT-CO2P00403 227 aa20.13■□□□□ 0.81
SHOX2-201ENST00000389589 TBX15Q96SF7 602 aa20.13■□□□□ 0.81
SHOX2-201ENST00000389589 AREGP15514 252 aa20.12■□□□□ 0.81
SHOX2-201ENST00000389589 TUBA4BQ9H853 241 aa20.12■□□□□ 0.81
SHOX2-201ENST00000389589 PAGE4O60829 102 aa20.12■□□□□ 0.81
SHOX2-201ENST00000389589 TSPAN9O75954 239 aa20.12■□□□□ 0.81
SHOX2-201ENST00000389589 ARL14EPLP0DKL9 152 aa20.12■□□□□ 0.81
SHOX2-201ENST00000389589 SPNS3Q6ZMD2 512 aa20.12■□□□□ 0.81
SHOX2-201ENST00000389589 FCN1O00602 326 aa20.11■□□□□ 0.81
SHOX2-201ENST00000389589 SSBP2P81877 361 aaPredicted RBP20.11■□□□□ 0.81
SHOX2-201ENST00000389589 HES1Q14469 280 aa20.11■□□□□ 0.81
SHOX2-201ENST00000389589 CYP2G1PQ6ZSU1 146 aa20.11■□□□□ 0.81
SHOX2-201ENST00000389589 THAP8Q8NA92 274 aa20.11■□□□□ 0.81
SHOX2-201ENST00000389589 C10orf105Q8TEF2 133 aa20.11■□□□□ 0.81
SHOX2-201ENST00000389589 GATAD1Q8WUU5 269 aa20.11■□□□□ 0.81
SHOX2-201ENST00000389589 LPAR2Q9HBW0 351 aa20.11■□□□□ 0.81
SHOX2-201ENST00000389589 CNIH1O95406 144 aa20.11■□□□□ 0.81
SHOX2-201ENST00000389589 PAX6P26367 422 aa20.11■□□□□ 0.81
SHOX2-201ENST00000389589 AKR1C3P42330 323 aa20.11■□□□□ 0.81
SHOX2-201ENST00000389589 CLEC2AQ6UVW9 174 aa20.11■□□□□ 0.81
SHOX2-201ENST00000389589 MALSU1Q96EH3 234 aa20.11■□□□□ 0.81
SHOX2-201ENST00000389589 SEPSECSQ9HD40 501 aaKnown RBP20.11■□□□□ 0.81
SHOX2-201ENST00000389589 F11RQ9Y624 299 aaKnown RBP20.11■□□□□ 0.81
SHOX2-201ENST00000389589 CRYGCP07315 174 aa20.1■□□□□ 0.81
SHOX2-201ENST00000389589 ATP5J2P56134 94 aa20.1■□□□□ 0.81
SHOX2-201ENST00000389589 PNRC1Q12796 327 aaPredicted RBP20.1■□□□□ 0.81
SHOX2-201ENST00000389589 EBI3Q14213 229 aa20.1■□□□□ 0.81
SHOX2-201ENST00000389589 OR4F5Q8NH21 305 aa20.1■□□□□ 0.81
SHOX2-201ENST00000389589 OR4F4Q96R69 305 aa20.1■□□□□ 0.81
SHOX2-201ENST00000389589 TXNDC17Q9BRA2 123 aa20.1■□□□□ 0.81
SHOX2-201ENST00000389589 ATF4P18848 351 aaPredicted RBP20.09■□□□□ 0.81
SHOX2-201ENST00000389589 DYNAPQ8N1N2 210 aa20.09■□□□□ 0.81
SHOX2-201ENST00000389589 C15orf54Q8N8G6 183 aa20.09■□□□□ 0.81
SHOX2-201ENST00000389589 C22orf15Q8WYQ4 148 aa20.09■□□□□ 0.81
SHOX2-201ENST00000389589 NPIPB3Q92617 1050 aa20.09■□□□□ 0.81
SHOX2-201ENST00000389589 MISP3Q96FF7 219 aa20.09■□□□□ 0.81
SHOX2-201ENST00000389589 FUT9Q9Y231 359 aa20.09■□□□□ 0.81
SHOX2-201ENST00000389589 MYO18BQ8IUG5 2567 aa20.09■□□□□ 0.81
SHOX2-201ENST00000389589 VWC2LB2RUY7 222 aa20.09■□□□□ 0.81
SHOX2-201ENST00000389589 C5orf64Q2M2E5 130 aa20.09■□□□□ 0.81
SHOX2-201ENST00000389589 FAM78BQ5VT40 261 aa20.09■□□□□ 0.81
SHOX2-201ENST00000389589 B4DEV8 164 aa20.08■□□□□ 0.81
SHOX2-201ENST00000389589 C11orf94C9JXX5 98 aa20.08■□□□□ 0.81
SHOX2-201ENST00000389589 MFAP2P55001 183 aa20.08■□□□□ 0.81
SHOX2-201ENST00000389589 SELENOTP62341 195 aa20.08■□□□□ 0.81
SHOX2-201ENST00000389589 ZFYVE26Q68DK2 2539 aa20.07■□□□□ 0.8
SHOX2-201ENST00000389589 A0A087WWC5 75 aa20.07■□□□□ 0.8
SHOX2-201ENST00000389589 TCRBV4S1A1TA0A5B7 111 aa20.07■□□□□ 0.8
SHOX2-201ENST00000389589 ZNF727A8MUV8 499 aa20.07■□□□□ 0.8
SHOX2-201ENST00000389589 CD24P25063 80 aa20.07■□□□□ 0.8
SHOX2-201ENST00000389589 SPATA31B1PQ5VZV4 182 aa20.07■□□□□ 0.8
SHOX2-201ENST00000389589 Q8N6K4 173 aa20.07■□□□□ 0.8
SHOX2-201ENST00000389589 RNF2Q99496 336 aa20.07■□□□□ 0.8
SHOX2-201ENST00000389589 PDE6DO43924 150 aa20.07■□□□□ 0.8
SHOX2-201ENST00000389589 OR5G3P0C626 314 aa20.07■□□□□ 0.8
SHOX2-201ENST00000389589 GCHFRP30047 84 aa20.07■□□□□ 0.8
SHOX2-201ENST00000389589 MED13LQ71F56 2210 aa20.06■□□□□ 0.8
SHOX2-201ENST00000389589 APELAP0DMC3 54 aa20.06■□□□□ 0.8
SHOX2-201ENST00000389589 GATA2P23769 480 aaPredicted RBP20.06■□□□□ 0.8
SHOX2-201ENST00000389589 RND2P52198 227 aa20.06■□□□□ 0.8
SHOX2-201ENST00000389589 C17orf50Q8WW18 174 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms